| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447562
Identifier: 46447562
GI number: 46447562
Start: 2296169
End: 2297755
Strand: Direct
Name: 46447562
Synonym: pc1928
Alternate gene names: NA
Gene position: 2296169-2297755 (Clockwise)
Preceding gene: 46447561
Following gene: 46447567
Centisome position: 95.1
GC content: 38.37
Gene sequence:
>1587_bases GTGGATGAGAATAATCCCTTAGACAATCCTTTGGCTAATACAGAGAAAACTAGTGCGTCAACGATTCAATCTTCCGCTCC TTCACCTACATCTGAAGAACTTCAACTGAGCTTTCACGAGGGAACTTCTCTAACCATTTCTCACTCTCAGTTAGCTTTGT TAAGGGAAAAATCCCTTTATTTTAAAACTCTTTGGTCAGGAAATTTTCAAGAAACCCTGCAACATCCTCTCGCTTTAACA CAAAAAGACTTTGTGCTTTTGCTTAATTGCCTAGCGAATCCTAAATTTGAAATTCCCTTGGAAGAGATTACTTCTGCCAT TCAACTAGCTGATTATTATGAACTGACAGAAGTGGTAACAAATTTAGAAGAACAGCTGATTGATGGATACAAATCACAAA GATTTGAACCATTTAACTCCACTGAAGAAAGTTTAGTCAGATTAAAAGAACTTTTAAGTTTCGCGCGTCGCTGCCAATTA AATAGATTGAAGAACTATTTAGAGTTCACCGTTGTAAGCGCCTTATTAAACCAGACTGTTCAGTTAGCAGAGTTTGAAAG AATTATAAATCACCTCTCAGATGAGATAAAAAAACTTAATTTTTCGGAGAATACTCATTTAACAGATGCTCATTTCTCAG TATTAAAAGAATGTAAAAATTTAAAAGCGCTTCATTTCGAGGCATGCCAGATTCTCACGGATGCAGGATTAGCCCATTTA AAACCCTTAACGGCTTTGCAGCATCTAAATCTGAGTGGGTGCTATCATCTTACCGATGTTGGATTAGCCCATTTGACATT CTTAACGGGTTTGCAGCATCTAGATTTAAGCCAATGCTGGCATTTCACTGATGATGGATTAGCGCATTTAACATCTTTAA CCGCTTTGCAATATCTAGCTCTAATGGGCTGTAAAAATCTCATCGATGCAGGATTAGCCCATTTGAAACCCTTAACAAGT TTGCAGCATCTAAATCTGAGAGGATGTGGGTATCTTACCGATGCTGGATTGGCACATTTGGCACCTTTAACGGGTTTGCA GCATCTAAATCTAAGCAAGTGCGAGAATCTCACCGATGTCGGATTAGCGCATTTGAGGCTCTTAGTAGCTTTACAGTATC TTAATCTAGATAATTGTAGAAAACTCACTGATGATGGGTTAGCCCATCTGACACCTGTAACGAATCTGCAGCATCTAGAT TTAAGCCAATGCTGGCATCTCACCGATATTGGATTAGCCCATTTGACACCCTTAAAGTCTTTGCAGCATCTAGATCTAAG CAGGTGTGAGAATCTCACTGATGATGGATTAGTGCATTTGACACCCTTAACGGCTTTACAACATTTAGACCTGAGTTATT GCTACAATCTCACTGATGATGGATTAGCCCATTTAACACCCTTAACGACTTTACAGCATCTAGATCTAATGGGCTGTAAG AATCTCACTGATGATGGGTTAGCGCATTTAACACCCTTAATTGCTTTGCAATATCTAGATCTAATTGGCTGTAAGAATTT CACCGATGATGGATTAGCACGTTTTAAAAATTTAGCAGCTTCACTCAATCTAACAATTATTAATTAG
Upstream 100 bases:
>100_bases GGTCATTTTGAATATTTCTAATTTTGGGTTTAATCCTAGTCATCTTGCCAATACAACGACTCCTTCTTACCCTCAATCTC AAGAGATTAATGACCCTCTT
Downstream 100 bases:
>100_bases AAAAACTTTCAATAAAAAGAGAAACTTAGCGCCGAAAATAAAAGCGTACTTTGTCCTAAGAAAATAAAGAATAAAATTTC ATTAAAATTTATCAACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MDENNPLDNPLANTEKTSASTIQSSAPSPTSEELQLSFHEGTSLTISHSQLALLREKSLYFKTLWSGNFQETLQHPLALT QKDFVLLLNCLANPKFEIPLEEITSAIQLADYYELTEVVTNLEEQLIDGYKSQRFEPFNSTEESLVRLKELLSFARRCQL NRLKNYLEFTVVSALLNQTVQLAEFERIINHLSDEIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHL KPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHLKPLTS LQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLD LSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAASLNLTIIN
Sequences:
>Translated_528_residues MDENNPLDNPLANTEKTSASTIQSSAPSPTSEELQLSFHEGTSLTISHSQLALLREKSLYFKTLWSGNFQETLQHPLALT QKDFVLLLNCLANPKFEIPLEEITSAIQLADYYELTEVVTNLEEQLIDGYKSQRFEPFNSTEESLVRLKELLSFARRCQL NRLKNYLEFTVVSALLNQTVQLAEFERIINHLSDEIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHL KPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHLKPLTS LQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLD LSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAASLNLTIIN >Mature_528_residues MDENNPLDNPLANTEKTSASTIQSSAPSPTSEELQLSFHEGTSLTISHSQLALLREKSLYFKTLWSGNFQETLQHPLALT QKDFVLLLNCLANPKFEIPLEEITSAIQLADYYELTEVVTNLEEQLIDGYKSQRFEPFNSTEESLVRLKELLSFARRCQL NRLKNYLEFTVVSALLNQTVQLAEFERIINHLSDEIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHL KPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLALMGCKNLIDAGLAHLKPLTS LQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDVGLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLD LSQCWHLTDIGLAHLTPLKSLQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAASLNLTIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=318, Percent_Identity=35.5345911949685, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI284447308, Length=318, Percent_Identity=33.9622641509434, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI27734755, Length=399, Percent_Identity=29.0726817042606, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI161333852, Length=351, Percent_Identity=29.9145299145299, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI161333854, Length=361, Percent_Identity=29.0858725761773, Blast_Score=109, Evalue=7e-24, Organism=Homo sapiens, GI6912466, Length=273, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI296531375, Length=389, Percent_Identity=28.5347043701799, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI284447314, Length=241, Percent_Identity=34.4398340248963, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI289666746, Length=243, Percent_Identity=35.3909465020576, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI25151694, Length=307, Percent_Identity=31.9218241042345, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25151696, Length=307, Percent_Identity=31.9218241042345, Blast_Score=114, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6322549, Length=362, Percent_Identity=27.6243093922652, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI17647819, Length=321, Percent_Identity=33.9563862928349, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI161076545, Length=376, Percent_Identity=29.5212765957447, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24652783, Length=376, Percent_Identity=29.5212765957447, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI161076547, Length=376, Percent_Identity=29.5212765957447, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI161076549, Length=376, Percent_Identity=29.5212765957447, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357913, Length=341, Percent_Identity=27.2727272727273, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24662818, Length=265, Percent_Identity=34.7169811320755, Blast_Score=92, Evalue=9e-19, Organism=Drosophila melanogaster, GI24646754, Length=285, Percent_Identity=30.1754385964912, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921840, Length=380, Percent_Identity=25.5263157894737, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58884; Mature: 58884
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDENNPLDNPLANTEKTSASTIQSSAPSPTSEELQLSFHEGTSLTISHSQLALLREKSLY CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHEEEEEECCCEEEEEHHHHHHHHHHHHH FKTLWSGNFQETLQHPLALTQKDFVLLLNCLANPKFEIPLEEITSAIQLADYYELTEVVT HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NLEEQLIDGYKSQRFEPFNSTEESLVRLKELLSFARRCQLNRLKNYLEFTVVSALLNQTV HHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAEFERIINHLSDEIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHL HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH KPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHH LMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHCCHHHH GLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKS HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK HHHCCHHHHCCCCCCCEEEEEHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAASLNLTIIN CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEC >Mature Secondary Structure MDENNPLDNPLANTEKTSASTIQSSAPSPTSEELQLSFHEGTSLTISHSQLALLREKSLY CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHEEEEEECCCEEEEEHHHHHHHHHHHHH FKTLWSGNFQETLQHPLALTQKDFVLLLNCLANPKFEIPLEEITSAIQLADYYELTEVVT HHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NLEEQLIDGYKSQRFEPFNSTEESLVRLKELLSFARRCQLNRLKNYLEFTVVSALLNQTV HHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLAEFERIINHLSDEIKKLNFSENTHLTDAHFSVLKECKNLKALHFEACQILTDAGLAHL HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHH KPLTALQHLNLSGCYHLTDVGLAHLTFLTGLQHLDLSQCWHFTDDGLAHLTSLTALQYLA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHH LMGCKNLIDAGLAHLKPLTSLQHLNLRGCGYLTDAGLAHLAPLTGLQHLNLSKCENLTDV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHCCHHHH GLAHLRLLVALQYLNLDNCRKLTDDGLAHLTPVTNLQHLDLSQCWHLTDIGLAHLTPLKS HHHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LQHLDLSRCENLTDDGLVHLTPLTALQHLDLSYCYNLTDDGLAHLTPLTTLQHLDLMGCK HHHCCHHHHCCCCCCCEEEEEHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC NLTDDGLAHLTPLIALQYLDLIGCKNFTDDGLARFKNLAASLNLTIIN CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA