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The map label for this gene is trpH [H]

Identifier: 46447259

GI number: 46447259

Start: 1944452

End: 1945294

Strand: Direct

Name: trpH [H]

Synonym: pc1625

Alternate gene names: 46447259

Gene position: 1944452-1945294 (Clockwise)

Preceding gene: 46447258

Following gene: 46447260

Centisome position: 80.53

GC content: 37.37

Gene sequence:

>843_bases
ATGAACAATTTTCGAGCAGATTTACATTGCCACACAACTTGTTCAGATGGAACTGTTGATCCTCTCGAGATCATTAATTT
AGCAATTAACTCTGGATTGCAAGGCTTATCTATCACAGATCACGATACAATTGAGGCTTATAAAGATGCTGCTCCTTTCG
CTCAACAAAAAGGACTATCTCTTATTCCTGGGGTAGAGTTTTCAGCCTCCCTCGGTCAAACAAGTGTACATATTTTGGGT
TACGGATTCTCTTTAAAATCTTCTATTATTTTAGACTTTTGTCAGAAACATCATCAAAGACGATTGGTGCGCAATCAACT
TATTTTAGACCGCCTTACTTCTCATGGAATGACTCTTACCTTAGAAGAAATCTATCCTGAATCCTTAATTTCTCAAAAAA
GTATGGGTCGCCCTCATATAGCTTTAGCAATGGTAAAAAAGGGTTATGTACCCACTATTCAGAAGGCATTTCAAGAGTAT
ATTGGGGAAGGAAAAAGCTGCTACATTTCAGGACAGTCTTTTACTGTAGAAGAAACGCTTGATATAATTCATCAAGCAAA
TGGTTTAGCAATTATCGCTCATCCCCACCTCATTGAAAATATTTCCATTACAAAAAAATTGCTTCAGCTAAACTTTGACG
GTATCGAAGGATATTATGGCCGCTTCCCTCGCGGAAAAGAGGATCGTTGGATTAAGATTGGGAATCATAAGAATTGGCTT
ATTACTGGAGGATCTGATTTCCATGGAGCAATCAAACCAGATCTCCCTTTGGGATGTTCATGGGTTAATCAAGACACTTT
TTCCATTTTAGAAAATCACTATAAAAACAATTGCCATACCTAA

Upstream 100 bases:

>100_bases
TCTCATTCGCCTCATCCAAGAAACAGTAAAAGCAAAGACTGGTGCGGAACTCGAAAGTGAAATACGCTATGTCCCCTATG
ATGTTAATCAAGGTTAAACT

Downstream 100 bases:

>100_bases
CATTATGCCTTATTCAGAATTGATTCAACGTCTGTTCGCGCTTAATCTTCATGGAGGAATAAAATTAGGTTTATCAAATT
GTGAAAAATTGCAAACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNNFRADLHCHTTCSDGTVDPLEIINLAINSGLQGLSITDHDTIEAYKDAAPFAQQKGLSLIPGVEFSASLGQTSVHILG
YGFSLKSSIILDFCQKHHQRRLVRNQLILDRLTSHGMTLTLEEIYPESLISQKSMGRPHIALAMVKKGYVPTIQKAFQEY
IGEGKSCYISGQSFTVEETLDIIHQANGLAIIAHPHLIENISITKKLLQLNFDGIEGYYGRFPRGKEDRWIKIGNHKNWL
ITGGSDFHGAIKPDLPLGCSWVNQDTFSILENHYKNNCHT

Sequences:

>Translated_280_residues
MNNFRADLHCHTTCSDGTVDPLEIINLAINSGLQGLSITDHDTIEAYKDAAPFAQQKGLSLIPGVEFSASLGQTSVHILG
YGFSLKSSIILDFCQKHHQRRLVRNQLILDRLTSHGMTLTLEEIYPESLISQKSMGRPHIALAMVKKGYVPTIQKAFQEY
IGEGKSCYISGQSFTVEETLDIIHQANGLAIIAHPHLIENISITKKLLQLNFDGIEGYYGRFPRGKEDRWIKIGNHKNWL
ITGGSDFHGAIKPDLPLGCSWVNQDTFSILENHYKNNCHT
>Mature_280_residues
MNNFRADLHCHTTCSDGTVDPLEIINLAINSGLQGLSITDHDTIEAYKDAAPFAQQKGLSLIPGVEFSASLGQTSVHILG
YGFSLKSSIILDFCQKHHQRRLVRNQLILDRLTSHGMTLTLEEIYPESLISQKSMGRPHIALAMVKKGYVPTIQKAFQEY
IGEGKSCYISGQSFTVEETLDIIHQANGLAIIAHPHLIENISITKKLLQLNFDGIEGYYGRFPRGKEDRWIKIGNHKNWL
ITGGSDFHGAIKPDLPLGCSWVNQDTFSILENHYKNNCHT

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=264, Percent_Identity=29.5454545454545, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31270; Mature: 31270

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFRADLHCHTTCSDGTVDPLEIINLAINSGLQGLSITDHDTIEAYKDAAPFAQQKGLS
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHCCCE
LIPGVEFSASLGQTSVHILGYGFSLKSSIILDFCQKHHQRRLVRNQLILDRLTSHGMTLT
ECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LEEIYPESLISQKSMGRPHIALAMVKKGYVPTIQKAFQEYIGEGKSCYISGQSFTVEETL
HHHHCHHHHHHHHHCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHH
DIIHQANGLAIIAHPHLIENISITKKLLQLNFDGIEGYYGRFPRGKEDRWIKIGNHKNWL
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCEEE
ITGGSDFHGAIKPDLPLGCSWVNQDTFSILENHYKNNCHT
EECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNNFRADLHCHTTCSDGTVDPLEIINLAINSGLQGLSITDHDTIEAYKDAAPFAQQKGLS
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHCCCE
LIPGVEFSASLGQTSVHILGYGFSLKSSIILDFCQKHHQRRLVRNQLILDRLTSHGMTLT
ECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LEEIYPESLISQKSMGRPHIALAMVKKGYVPTIQKAFQEYIGEGKSCYISGQSFTVEETL
HHHHCHHHHHHHHHCCCCCEEEEEHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEHHHHH
DIIHQANGLAIIAHPHLIENISITKKLLQLNFDGIEGYYGRFPRGKEDRWIKIGNHKNWL
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCEEEECCCCEEE
ITGGSDFHGAIKPDLPLGCSWVNQDTFSILENHYKNNCHT
EECCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]