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The map label for this gene is ytqB [H]

Identifier: 46447254

GI number: 46447254

Start: 1940867

End: 1941415

Strand: Direct

Name: ytqB [H]

Synonym: pc1620

Alternate gene names: 46447254

Gene position: 1940867-1941415 (Clockwise)

Preceding gene: 46447253

Following gene: 46447256

Centisome position: 80.38

GC content: 35.15

Gene sequence:

>549_bases
GTGATTGATGCAACATGTGGTAATGGAAATGATACACTTAAATTATGCCAACTTCTCTTATCAAATGGGGATGGAAAGGT
GTATGCATTCGACAATCAAAGTGATGCGATTGATAAAACAAAAGTATTGTTACGTGAGCACTTAAATTTAGATCAGTTTA
AGCAAATTAATTTTATTTTAGGATGCCACTCTAAATTTTCCGATTATGTTTTACCTAATACAATTAAACTGATTGTCTAC
AATTTAGGGTATTTACCAGGCGGAGACAAGAAAAAGACGACACTCACTTCTACAACTTTACTAAGTTTGCAAAATAGCTT
AAACTTAATAAAGCCGGGAGGGATGATCTGCATAACATGTTATCCAGGTCATGCGGAAGGATTACTTGAAGAAAAAGCCC
TTCTTAAGTTTGCTCTCAACCTTCCTCCTATGGAATGGAGTTGTTGTTATCATTCATGGATTAATCGACGACAATCGCCA
AGCCTATTACTTCTTCAAAAAACTTGCCAGCAAACTTTATATTACCCAAATCCCACAACGGTTTTATAA

Upstream 100 bases:

>100_bases
AAAACTTACTTTATTTATGAGAGCCACCTTTCCTTTATTTCAATCTCATTTAGATCTCGCTCACGATTATTGGCGTAGGA
TCCTTCAGCCCAATGATCGA

Downstream 100 bases:

>100_bases
CATAAGATTAAATGATTAACACCATTAAGAGCATTATGGGGGCTACTTTCTATTGGTAACCCGAAATGTTGAGCGATAGT
ATTTTTAGAAAGATTAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIDATCGNGNDTLKLCQLLLSNGDGKVYAFDNQSDAIDKTKVLLREHLNLDQFKQINFILGCHSKFSDYVLPNTIKLIVY
NLGYLPGGDKKKTTLTSTTLLSLQNSLNLIKPGGMICITCYPGHAEGLLEEKALLKFALNLPPMEWSCCYHSWINRRQSP
SLLLLQKTCQQTLYYPNPTTVL

Sequences:

>Translated_182_residues
MIDATCGNGNDTLKLCQLLLSNGDGKVYAFDNQSDAIDKTKVLLREHLNLDQFKQINFILGCHSKFSDYVLPNTIKLIVY
NLGYLPGGDKKKTTLTSTTLLSLQNSLNLIKPGGMICITCYPGHAEGLLEEKALLKFALNLPPMEWSCCYHSWINRRQSP
SLLLLQKTCQQTLYYPNPTTVL
>Mature_182_residues
MIDATCGNGNDTLKLCQLLLSNGDGKVYAFDNQSDAIDKTKVLLREHLNLDQFKQINFILGCHSKFSDYVLPNTIKLIVY
NLGYLPGGDKKKTTLTSTTLLSLQNSLNLIKPGGMICITCYPGHAEGLLEEKALLKFALNLPPMEWSCCYHSWINRRQSP
SLLLLQKTCQQTLYYPNPTTVL

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20387; Mature: 20387

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDATCGNGNDTLKLCQLLLSNGDGKVYAFDNQSDAIDKTKVLLREHLNLDQFKQINFIL
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHEEE
GCHSKFSDYVLPNTIKLIVYNLGYLPGGDKKKTTLTSTTLLSLQNSLNLIKPGGMICITC
ECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCEECCCCEEEEEE
YPGHAEGLLEEKALLKFALNLPPMEWSCCYHSWINRRQSPSLLLLQKTCQQTLYYPNPTT
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHCEECCCCCC
VL
CC
>Mature Secondary Structure
MIDATCGNGNDTLKLCQLLLSNGDGKVYAFDNQSDAIDKTKVLLREHLNLDQFKQINFIL
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHEEE
GCHSKFSDYVLPNTIKLIVYNLGYLPGGDKKKTTLTSTTLLSLQNSLNLIKPGGMICITC
ECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCEECCCCEEEEEE
YPGHAEGLLEEKALLKFALNLPPMEWSCCYHSWINRRQSPSLLLLQKTCQQTLYYPNPTT
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHHHHHHHCEECCCCCC
VL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]