| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447253
Identifier: 46447253
GI number: 46447253
Start: 1939697
End: 1939948
Strand: Direct
Name: 46447253
Synonym: pc1619
Alternate gene names: NA
Gene position: 1939697-1939948 (Clockwise)
Preceding gene: 46447251
Following gene: 46447254
Centisome position: 80.34
GC content: 35.71
Gene sequence:
>252_bases GTGTCTCTTCATGAAATTTGTAGAATTTTTGATCTAAGGATGCCATGGCTGCTAGATTTTATTAATTTCATTATCAATGA TTTACCTGAGGATTTAAATGCACAAGTCACTTGTCATGAGAAAAATGAGTTGGAAGTAGCTAAACTTGAAGTAGATGAGC GATGGAGCTTTGTAAGAAATAAGGAAAATGATCAGTGGTTATGTGGCTTGTCTTCCATAAAAAAAGTCGCCAAGTGCTTG CTAGGCAAGTAG
Upstream 100 bases:
>100_bases TCGCTGTTTAGAGTATGACAAACAGTGGAGCGAAAACAATGAAGCTAAAATCATTAACGAATAAACAAAGGAACTTGTCA GAAAAGCTCTTCTAGAAAGG
Downstream 100 bases:
>100_bases GTTCTCGAGATAAAAAACCGCTGAGCTTCTTTTTGCGAAATGACCTGAATCTCTAAAAAAAAGCCCTCTATTTCACTAAT AAATTTAATGTCTATTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSLHEICRIFDLRMPWLLDFINFIINDLPEDLNAQVTCHEKNELEVAKLEVDERWSFVRNKENDQWLCGLSSIKKVAKCL LGK
Sequences:
>Translated_83_residues MSLHEICRIFDLRMPWLLDFINFIINDLPEDLNAQVTCHEKNELEVAKLEVDERWSFVRNKENDQWLCGLSSIKKVAKCL LGK >Mature_82_residues SLHEICRIFDLRMPWLLDFINFIINDLPEDLNAQVTCHEKNELEVAKLEVDERWSFVRNKENDQWLCGLSSIKKVAKCLL GK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9805; Mature: 9673
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHEICRIFDLRMPWLLDFINFIINDLPEDLNAQVTCHEKNELEVAKLEVDERWSFVRN CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHHCC KENDQWLCGLSSIKKVAKCLLGK CCCCCCHHCHHHHHHHHHHHCCC >Mature Secondary Structure SLHEICRIFDLRMPWLLDFINFIINDLPEDLNAQVTCHEKNELEVAKLEVDERWSFVRN CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECHHHHHHHHCC KENDQWLCGLSSIKKVAKCLLGK CCCCCCHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA