| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447256
Identifier: 46447256
GI number: 46447256
Start: 1942484
End: 1942792
Strand: Direct
Name: 46447256
Synonym: pc1622
Alternate gene names: NA
Gene position: 1942484-1942792 (Clockwise)
Preceding gene: 46447254
Following gene: 46447257
Centisome position: 80.45
GC content: 34.63
Gene sequence:
>309_bases TTGCCTATGAAATTATTTATACAACCTTTAACAAATTTGCTGACTCGGATTCGTTATCCCACGTCTTTACCCGCAGTAGT TGCAACTGATTTAGGAATCAATATTTCAAATACCTTGAATTTTCAAGAATTTATTTCACTTCTCACTAATCCTAATTGCC GTCCAAGCAAACTTTCTCGATTTATGCCTCGCGAACAAGCAGAAAATCTTTTTCAAACTGCCATTCGCAAAGGCATTCTC TTTTTTTCTATCATTTTAATGGCGGGTGGATGGAATTTATGCTTCAATTTGATGAAAAAGCAAGATTAA
Upstream 100 bases:
>100_bases GTCTCAATTTATTATATATATAATTCCGCAATAGAGTATCAGATTTTCTTTACTTTCTTATTTGTTAGCGATGTTGTCTT CCATAATCACATAACCCCCA
Downstream 100 bases:
>100_bases GGAGAATTTATATTAAGCATAAAGATCTTAAGCAAAAATATGAAATTTCTATTTCTTAATAGTCTGAAACATCCCTATTA TGCTAAACTAATTTCATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MPMKLFIQPLTNLLTRIRYPTSLPAVVATDLGINISNTLNFQEFISLLTNPNCRPSKLSRFMPREQAENLFQTAIRKGIL FFSIILMAGGWNLCFNLMKKQD
Sequences:
>Translated_102_residues MPMKLFIQPLTNLLTRIRYPTSLPAVVATDLGINISNTLNFQEFISLLTNPNCRPSKLSRFMPREQAENLFQTAIRKGIL FFSIILMAGGWNLCFNLMKKQD >Mature_101_residues PMKLFIQPLTNLLTRIRYPTSLPAVVATDLGINISNTLNFQEFISLLTNPNCRPSKLSRFMPREQAENLFQTAIRKGILF FSIILMAGGWNLCFNLMKKQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11678; Mature: 11547
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKLFIQPLTNLLTRIRYPTSLPAVVATDLGINISNTLNFQEFISLLTNPNCRPSKLSR CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH FMPREQAENLFQTAIRKGILFFSIILMAGGWNLCFNLMKKQD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure PMKLFIQPLTNLLTRIRYPTSLPAVVATDLGINISNTLNFQEFISLLTNPNCRPSKLSR CHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH FMPREQAENLFQTAIRKGILFFSIILMAGGWNLCFNLMKKQD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA