| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447234
Identifier: 46447234
GI number: 46447234
Start: 1915185
End: 1915808
Strand: Direct
Name: 46447234
Synonym: pc1600
Alternate gene names: NA
Gene position: 1915185-1915808 (Clockwise)
Preceding gene: 46447231
Following gene: 46447236
Centisome position: 79.32
GC content: 37.98
Gene sequence:
>624_bases ATGAAAAAAATAACCAATTTCTTAATCAGTGGCACCTTAACTTTAACTGCTATTATCCCCTTATTTGGCCAATCTCCCTC CAATCAGCAGGCTTACCCTAATCAAACATATGCCCAGCCAACAACGACAAAGGGACAAATGAATCAAAGCAAAACCCATG ATCAATCTTCTCGTCATTTTGGCTCACAAAACCTTAATGAACACTCTTTGACTTGGATAACAAATTATCATGAAGCTGTT GCCCAATCTCAGTCGACAGGAAAACCCATCATTTTATTATTTACAGGCACAAATTGGTGTCCAGCTTGCATGAAATTAGA AAAAGAGGTGTTAACTAAGCCTGAATTTGCACAAGGTGTGGGCAATCAATTTATCTTCTTCAAAGCCGAATTTCCAGACT ATGGTGAAGATGCTATTATGTCATCTCCATATAGTACTTTATTGCAACGCTATAACATCAATGCATTCCCCACTCTTGTT GTGATCAACGCAAGTGGGCAACTTTTGTTTACCGTTAATTACAAAGCTGGTGGGCCTACTGTTTATATCAACGAATTACT ACAAAAACTCAATCCAGGCCAATTCTCGGGTTCTATGAACCACTTTAACACTTATTATCGATAA
Upstream 100 bases:
>100_bases TTTTAATCGATTTTAAATTTAGTCTAATTGTGCAATAAAATAAGAATTTAGCCCAATATTTTAATATTCATTAAGCATAA ATTCAAGAAAGGAATGAAAA
Downstream 100 bases:
>100_bases TTATTTAAAGTTGATTCTGGATCACGATAAAAAAATCAGGATTCAGAATTATTTTTTTAATTTCTCCAGTCAGTCATTTT CAATAACTCTTTCGGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Disulfide Bond Isomerase; Thioredoxin/Thiol-Disulfide Isomerase; Thiol-Disulfide Isomerase Or Thioredoxin; Thioredoxin Family Protein; Thioredoxin Domain; Protein Disulfide Isomerase
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MKKITNFLISGTLTLTAIIPLFGQSPSNQQAYPNQTYAQPTTTKGQMNQSKTHDQSSRHFGSQNLNEHSLTWITNYHEAV AQSQSTGKPIILLFTGTNWCPACMKLEKEVLTKPEFAQGVGNQFIFFKAEFPDYGEDAIMSSPYSTLLQRYNINAFPTLV VINASGQLLFTVNYKAGGPTVYINELLQKLNPGQFSGSMNHFNTYYR
Sequences:
>Translated_207_residues MKKITNFLISGTLTLTAIIPLFGQSPSNQQAYPNQTYAQPTTTKGQMNQSKTHDQSSRHFGSQNLNEHSLTWITNYHEAV AQSQSTGKPIILLFTGTNWCPACMKLEKEVLTKPEFAQGVGNQFIFFKAEFPDYGEDAIMSSPYSTLLQRYNINAFPTLV VINASGQLLFTVNYKAGGPTVYINELLQKLNPGQFSGSMNHFNTYYR >Mature_207_residues MKKITNFLISGTLTLTAIIPLFGQSPSNQQAYPNQTYAQPTTTKGQMNQSKTHDQSSRHFGSQNLNEHSLTWITNYHEAV AQSQSTGKPIILLFTGTNWCPACMKLEKEVLTKPEFAQGVGNQFIFFKAEFPDYGEDAIMSSPYSTLLQRYNINAFPTLV VINASGQLLFTVNYKAGGPTVYINELLQKLNPGQFSGSMNHFNTYYR
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23179; Mature: 23179
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITNFLISGTLTLTAIIPLFGQSPSNQQAYPNQTYAQPTTTKGQMNQSKTHDQSSRHF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC GSQNLNEHSLTWITNYHEAVAQSQSTGKPIILLFTGTNWCPACMKLEKEVLTKPEFAQGV CCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCC GNQFIFFKAEFPDYGEDAIMSSPYSTLLQRYNINAFPTLVVINASGQLLFTVNYKAGGPT CCEEEEEEECCCCCCCHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCE VYINELLQKLNPGQFSGSMNHFNTYYR EEHHHHHHHCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKKITNFLISGTLTLTAIIPLFGQSPSNQQAYPNQTYAQPTTTKGQMNQSKTHDQSSRHF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC GSQNLNEHSLTWITNYHEAVAQSQSTGKPIILLFTGTNWCPACMKLEKEVLTKPEFAQGV CCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHCC GNQFIFFKAEFPDYGEDAIMSSPYSTLLQRYNINAFPTLVVINASGQLLFTVNYKAGGPT CCEEEEEEECCCCCCCHHHHCCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCE VYINELLQKLNPGQFSGSMNHFNTYYR EEHHHHHHHCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA