Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447236

Identifier: 46447236

GI number: 46447236

Start: 1918217

End: 1920091

Strand: Direct

Name: 46447236

Synonym: pc1602

Alternate gene names: NA

Gene position: 1918217-1920091 (Clockwise)

Preceding gene: 46447234

Following gene: 46447239

Centisome position: 79.45

GC content: 34.93

Gene sequence:

>1875_bases
TTGTCTTTTTCCTGCTTTAACAAACTAGGAAAGAGTCGATTCTCATACTTGTTAAAAAATTATTTTTTGGACGTTTTAAA
AACAAAAAAGTTAATAAGATTTCCGTCTCCAATAATCAAACAAGGAGTTTTTTTTATGCATATAGTAGATTTAAGATCAT
CATCAACTACTCACGATGGAACAAATCTACAAGGAGAACAATCGAGTCAAAATCTAGCAATCCCACCCCATCCCCCTATT
CCTCCATTCATTTCTCCCTTACCTTTACCAGAAGCTTCTCCTCGCGCAAATGGCATTTTATGTACTCAAATTTCTCCTAC
GCCAATGACTCAAAATTCAGGGACTCCCCCTCAAAATAGATTTAGAGAGACTCATTCAGATAGCACAAGTAATTTTTCTG
CGATTCCCACAAGCGAAGCAGAGCAATCTGTTGAAGCAGATCCAATTTCTGCTCCTACTTCTCCTTTAATTTTAGCTCAT
GTTTCTCATCAAGATGAAGGTCCTTTAGTCCAAACATTAGCAACTAAAATTATGGCGTTTATTGAAAGGCAAACTCCTAT
TCGTTTAAATACTTGGTTTACTCCTGAGGATCAAGCAGAAATGGAACAAATTATTAGAAATACCTCTGACAGAAGCCAAA
CTATTACAATGTCATTTTTGACATGTCTATCTGGAATGGTAGCCAGTTTTGCTCTCGCTGTTTCCCAAAAAAACAAGTCT
TATGAATTAGATGCGAGCAGATTAACGATCTTACAAAGAGAGGCCTACAGCCAAATAAAGGAGCAAGATCAAGCCTCTTA
CGAAGTTTTAACTGAACAATCTCTTAGAATAGAAGAATTAATGCAAACAAGAAAAGATGTTTATAGAATTCAGTATGAAA
AGATGCAAACAGAGCAAATGCATTTAAAAGAAATACACAAAGGCAACACTAGAGGGTGGTTTGCCCCTCATTTTGGGATT
GCTTACCACGCAGAAACAGTGTTTAAATTACTAGAACAACGACGTCTTAATTTAAAAATTTCTCTTAATGATTTAAACAG
ACTTCCAGAAAATTCTCCACCTCGCACTTCACATGAAGTAACGCAAATTGTAACTACAATAAACACTAAACTTGCAGAAT
TAGAAGAGCAAATTTTAGTTCATCAAAAAACATTAAAATCTTTAGAGGGTGAATCTGCAGACCAATTTAGATGTGAAAGT
TATTACCTGCATTTTAACAGAATGAAAAAACAAAGTAGATGCTACGATGAAAATCAAAGAAGAATAGCACAGCGTCTTCG
TGAACTAGAAGCAGAAACAAACACTGAACTTTTGCCAAGTCAGATGGCTCAACGAAAATTTGAGATTGCTATGATCAGGG
CTTATCAGAAAAAAATTGAGAAAAGATTAATTAATCTCAGAACGCTTTTAAGCGGCTATAAAATTATGGAGGGAGAAAGA
GTGACTGTTAACGTAAGAAGAAATAACTCTAGATCAGCTGAATTAAAAAAAGGAGCTGATCTTTTAAACAGTCTTGTTGC
TCTTCAAGAACGAGTGACTATACACTCTTCATTAGCGCACATTTCCCCCCCCGAAATAGAAAAAAATTTGCTTAAACAAG
ATTACTTGAAATTTCTTGAGTTACAATCTAGTTTTAGTGTGGTGCATAATACTTTCAAAGAGAGAACAGTTAGTTTGGAA
AGCAACATGATTAAGTGTTTTTCAAATGTTGAAAAAATTGAAAGTTGTTTAAAAACGTTTAGACAGCAAATGGCTAATCT
TACAGTTGAAATTAAACACAGAACGTGTTGGTTCAAAGCAGAGATTACACCTCCTGCTCAACCCTGGTGGCGTTTTATTA
TCAATTTCTTATTCCTTCAAAGGCGCTTTGATTAA

Upstream 100 bases:

>100_bases
GATATCTGCTCACCCCCCTAACGACCTTTTGCTCTTATATTTACACAAGCTAGAGCTTCTTAATTAGCTAATACTGGATA
TAAAACTGACAAATGATCGC

Downstream 100 bases:

>100_bases
TCTTGTTTGATACCGGTACTGAAAAAACTTTAAAGTTTTTTCAGTACCGAAATTGCTAATACTAAATTTATGACATTCAA
AATCTTAAAAAAGTTAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 624; Mature: 623

Protein sequence:

>624_residues
MSFSCFNKLGKSRFSYLLKNYFLDVLKTKKLIRFPSPIIKQGVFFMHIVDLRSSSTTHDGTNLQGEQSSQNLAIPPHPPI
PPFISPLPLPEASPRANGILCTQISPTPMTQNSGTPPQNRFRETHSDSTSNFSAIPTSEAEQSVEADPISAPTSPLILAH
VSHQDEGPLVQTLATKIMAFIERQTPIRLNTWFTPEDQAEMEQIIRNTSDRSQTITMSFLTCLSGMVASFALAVSQKNKS
YELDASRLTILQREAYSQIKEQDQASYEVLTEQSLRIEELMQTRKDVYRIQYEKMQTEQMHLKEIHKGNTRGWFAPHFGI
AYHAETVFKLLEQRRLNLKISLNDLNRLPENSPPRTSHEVTQIVTTINTKLAELEEQILVHQKTLKSLEGESADQFRCES
YYLHFNRMKKQSRCYDENQRRIAQRLRELEAETNTELLPSQMAQRKFEIAMIRAYQKKIEKRLINLRTLLSGYKIMEGER
VTVNVRRNNSRSAELKKGADLLNSLVALQERVTIHSSLAHISPPEIEKNLLKQDYLKFLELQSSFSVVHNTFKERTVSLE
SNMIKCFSNVEKIESCLKTFRQQMANLTVEIKHRTCWFKAEITPPAQPWWRFIINFLFLQRRFD

Sequences:

>Translated_624_residues
MSFSCFNKLGKSRFSYLLKNYFLDVLKTKKLIRFPSPIIKQGVFFMHIVDLRSSSTTHDGTNLQGEQSSQNLAIPPHPPI
PPFISPLPLPEASPRANGILCTQISPTPMTQNSGTPPQNRFRETHSDSTSNFSAIPTSEAEQSVEADPISAPTSPLILAH
VSHQDEGPLVQTLATKIMAFIERQTPIRLNTWFTPEDQAEMEQIIRNTSDRSQTITMSFLTCLSGMVASFALAVSQKNKS
YELDASRLTILQREAYSQIKEQDQASYEVLTEQSLRIEELMQTRKDVYRIQYEKMQTEQMHLKEIHKGNTRGWFAPHFGI
AYHAETVFKLLEQRRLNLKISLNDLNRLPENSPPRTSHEVTQIVTTINTKLAELEEQILVHQKTLKSLEGESADQFRCES
YYLHFNRMKKQSRCYDENQRRIAQRLRELEAETNTELLPSQMAQRKFEIAMIRAYQKKIEKRLINLRTLLSGYKIMEGER
VTVNVRRNNSRSAELKKGADLLNSLVALQERVTIHSSLAHISPPEIEKNLLKQDYLKFLELQSSFSVVHNTFKERTVSLE
SNMIKCFSNVEKIESCLKTFRQQMANLTVEIKHRTCWFKAEITPPAQPWWRFIINFLFLQRRFD
>Mature_623_residues
SFSCFNKLGKSRFSYLLKNYFLDVLKTKKLIRFPSPIIKQGVFFMHIVDLRSSSTTHDGTNLQGEQSSQNLAIPPHPPIP
PFISPLPLPEASPRANGILCTQISPTPMTQNSGTPPQNRFRETHSDSTSNFSAIPTSEAEQSVEADPISAPTSPLILAHV
SHQDEGPLVQTLATKIMAFIERQTPIRLNTWFTPEDQAEMEQIIRNTSDRSQTITMSFLTCLSGMVASFALAVSQKNKSY
ELDASRLTILQREAYSQIKEQDQASYEVLTEQSLRIEELMQTRKDVYRIQYEKMQTEQMHLKEIHKGNTRGWFAPHFGIA
YHAETVFKLLEQRRLNLKISLNDLNRLPENSPPRTSHEVTQIVTTINTKLAELEEQILVHQKTLKSLEGESADQFRCESY
YLHFNRMKKQSRCYDENQRRIAQRLRELEAETNTELLPSQMAQRKFEIAMIRAYQKKIEKRLINLRTLLSGYKIMEGERV
TVNVRRNNSRSAELKKGADLLNSLVALQERVTIHSSLAHISPPEIEKNLLKQDYLKFLELQSSFSVVHNTFKERTVSLES
NMIKCFSNVEKIESCLKTFRQQMANLTVEIKHRTCWFKAEITPPAQPWWRFIINFLFLQRRFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72086; Mature: 71954

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSCFNKLGKSRFSYLLKNYFLDVLKTKKLIRFPSPIIKQGVFFMHIVDLRSSSTTHDG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCCC
TNLQGEQSSQNLAIPPHPPIPPFISPLPLPEASPRANGILCTQISPTPMTQNSGTPPQNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH
FRETHSDSTSNFSAIPTSEAEQSVEADPISAPTSPLILAHVSHQDEGPLVQTLATKIMAF
HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
IERQTPIRLNTWFTPEDQAEMEQIIRNTSDRSQTITMSFLTCLSGMVASFALAVSQKNKS
HHCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YELDASRLTILQREAYSQIKEQDQASYEVLTEQSLRIEELMQTRKDVYRIQYEKMQTEQM
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLKEIHKGNTRGWFAPHFGIAYHAETVFKLLEQRRLNLKISLNDLNRLPENSPPRTSHEV
HHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHH
TQIVTTINTKLAELEEQILVHQKTLKSLEGESADQFRCESYYLHFNRMKKQSRCYDENQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
RIAQRLRELEAETNTELLPSQMAQRKFEIAMIRAYQKKIEKRLINLRTLLSGYKIMEGER
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCE
VTVNVRRNNSRSAELKKGADLLNSLVALQERVTIHSSLAHISPPEIEKNLLKQDYLKFLE
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LQSSFSVVHNTFKERTVSLESNMIKCFSNVEKIESCLKTFRQQMANLTVEIKHRTCWFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEE
EITPPAQPWWRFIINFLFLQRRFD
ECCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSCFNKLGKSRFSYLLKNYFLDVLKTKKLIRFPSPIIKQGVFFMHIVDLRSSSTTHDG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCCCC
TNLQGEQSSQNLAIPPHPPIPPFISPLPLPEASPRANGILCTQISPTPMTQNSGTPPQNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHH
FRETHSDSTSNFSAIPTSEAEQSVEADPISAPTSPLILAHVSHQDEGPLVQTLATKIMAF
HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
IERQTPIRLNTWFTPEDQAEMEQIIRNTSDRSQTITMSFLTCLSGMVASFALAVSQKNKS
HHCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YELDASRLTILQREAYSQIKEQDQASYEVLTEQSLRIEELMQTRKDVYRIQYEKMQTEQM
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLKEIHKGNTRGWFAPHFGIAYHAETVFKLLEQRRLNLKISLNDLNRLPENSPPRTSHEV
HHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCHHHH
TQIVTTINTKLAELEEQILVHQKTLKSLEGESADQFRCESYYLHFNRMKKQSRCYDENQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
RIAQRLRELEAETNTELLPSQMAQRKFEIAMIRAYQKKIEKRLINLRTLLSGYKIMEGER
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCE
VTVNVRRNNSRSAELKKGADLLNSLVALQERVTIHSSLAHISPPEIEKNLLKQDYLKFLE
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LQSSFSVVHNTFKERTVSLESNMIKCFSNVEKIESCLKTFRQQMANLTVEIKHRTCWFKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEE
EITPPAQPWWRFIINFLFLQRRFD
ECCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA