| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is pgsA [H]
Identifier: 46447231
GI number: 46447231
Start: 1912196
End: 1912813
Strand: Direct
Name: pgsA [H]
Synonym: pc1597
Alternate gene names: 46447231
Gene position: 1912196-1912813 (Clockwise)
Preceding gene: 46447230
Following gene: 46447234
Centisome position: 79.2
GC content: 31.23
Gene sequence:
>618_bases TTGAGTATTCCTAATTGTCTGACTTTTTTTCGTATTTTTATTAGCCCCATTTTTCTATTGGTTTATTTAGAATATGAGTT TTTAAATATCCAAATGACAACTTTGCCTTATATTTTACTTTTTCTTTTAGGTATCTCAGAATTATCTGATGCCTGTGACG GATATCTTGCACGTAAATATAATCAAGTTACAGATCTGGGTAAAATTTTAGATCCTATGGCAGACAGCATCTATAGAATT TCAATTTTTCTAACTTTTACACTTCCTCCTGTTCAGCTTCCCATGCTTTTGATTTTTATTTTTATTTATAGAGATTCTGT TGTAAGCACTTTAAGAACTATTTGTGCTTTGAAAGGATTCGCACTTGCTGCTAGACCTAGCGGTAAAATTAAAGCTGTCT TTCAAGCCCTAGCTTCATTTACTGTCATTATTTTGCTAATTCCTTATTCGCTGGGTTATTTATCTCTTCATTCGCTACAA TATATTAGCATGATAGTTGTATTAGCAGCCGCTCTTTATTCCTTACTTTCGGGTGTAGAATATGTTTATGCCAATAAACA ATATATTATGAAGCTTTTGACATCTAAAAATAGCCTAAAACGAGATTTAATTGATTAA
Upstream 100 bases:
>100_bases GGACTCTTGAATTAATACAAAAATGTAGTTATTCTTCCTTTCTCGTCTGAGTCTTGGATTTCTAATATAACTATCAGCGA TGGTTGAAAGGAAGATTATC
Downstream 100 bases:
>100_bases ATTTCGAAAAATTCCCTTTTTACAGTTGGTTTATAAACATTAAAAATGAATAGTTTATTCTGTTGAGAACAAAATACTCA TCTAATTGGAATTCATCTCA
Product: putative phosphatidylglycerophosphate synthase (PGP synthase)
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSIPNCLTFFRIFISPIFLLVYLEYEFLNIQMTTLPYILLFLLGISELSDACDGYLARKYNQVTDLGKILDPMADSIYRI SIFLTFTLPPVQLPMLLIFIFIYRDSVVSTLRTICALKGFALAARPSGKIKAVFQALASFTVIILLIPYSLGYLSLHSLQ YISMIVVLAAALYSLLSGVEYVYANKQYIMKLLTSKNSLKRDLID
Sequences:
>Translated_205_residues MSIPNCLTFFRIFISPIFLLVYLEYEFLNIQMTTLPYILLFLLGISELSDACDGYLARKYNQVTDLGKILDPMADSIYRI SIFLTFTLPPVQLPMLLIFIFIYRDSVVSTLRTICALKGFALAARPSGKIKAVFQALASFTVIILLIPYSLGYLSLHSLQ YISMIVVLAAALYSLLSGVEYVYANKQYIMKLLTSKNSLKRDLID >Mature_204_residues SIPNCLTFFRIFISPIFLLVYLEYEFLNIQMTTLPYILLFLLGISELSDACDGYLARKYNQVTDLGKILDPMADSIYRIS IFLTFTLPPVQLPMLLIFIFIYRDSVVSTLRTICALKGFALAARPSGKIKAVFQALASFTVIILLIPYSLGYLSLHSLQY ISMIVVLAAALYSLLSGVEYVYANKQYIMKLLTSKNSLKRDLID
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=199, Percent_Identity=27.1356783919598, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 23200; Mature: 23069
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPNCLTFFRIFISPIFLLVYLEYEFLNIQMTTLPYILLFLLGISELSDACDGYLARKY CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQVTDLGKILDPMADSIYRISIFLTFTLPPVQLPMLLIFIFIYRDSVVSTLRTICALKGF HHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALAARPSGKIKAVFQALASFTVIILLIPYSLGYLSLHSLQYISMIVVLAAALYSLLSGVE CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YVYANKQYIMKLLTSKNSLKRDLID HHHCCHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure SIPNCLTFFRIFISPIFLLVYLEYEFLNIQMTTLPYILLFLLGISELSDACDGYLARKY CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQVTDLGKILDPMADSIYRISIFLTFTLPPVQLPMLLIFIFIYRDSVVSTLRTICALKGF HHHHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ALAARPSGKIKAVFQALASFTVIILLIPYSLGYLSLHSLQYISMIVVLAAALYSLLSGVE CEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YVYANKQYIMKLLTSKNSLKRDLID HHHCCHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA