Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446938

Identifier: 46446938

GI number: 46446938

Start: 1559316

End: 1559720

Strand: Direct

Name: 46446938

Synonym: pc1304

Alternate gene names: NA

Gene position: 1559316-1559720 (Clockwise)

Preceding gene: 46446936

Following gene: 46446942

Centisome position: 64.58

GC content: 34.32

Gene sequence:

>405_bases
TTGATACTACTTAAACATTTAATTGTTGTGTTTAACAAGAAAATATATTTATGTTTAAAAATAGCGGTCAATTATTTTTT
AAGGGGTTTGTATATGAACCAACTCATCAAAAGTTTTTTTATTGCCGGCTTGCTCTGTTCTTTTATGAGTCTAGGAGCTC
AATTTGACATTGGCTACAGAAATGGGAGTCAAGAATGCCACTGCAGCTATGAGTGTAGATGCAATCCTGATTGGCATGAT
GGATACAAGGGAAATCCAAGCGATCTTAATTACTCTCATTCTCACTATGATAACTATTATGGCTATCCCTCTCAAACCAA
TAGCGATTCCTATAGTTACCCATCCTATGGTCAATATGAACATAGTGATGGTAGGATCGGCTTAATCAATTATAAATTTA
GATGA

Upstream 100 bases:

>100_bases
AAAAATAACTAGATCTACTTTTCTTTGCCTCCCAAAAAATGACCACTTTTTTATTCGATAAAGTAACAAGGTTGAAATTA
AATCTTTCAACGTGAGCAAG

Downstream 100 bases:

>100_bases
TCCCTTAAAAAAGGAATAATCATACCTGAACCGGACGCATAACCCGATTCAGGTAAGTCGATGTTGACTTACCTAAGGTA
GCAACATCGATATCTTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MILLKHLIVVFNKKIYLCLKIAVNYFLRGLYMNQLIKSFFIAGLLCSFMSLGAQFDIGYRNGSQECHCSYECRCNPDWHD
GYKGNPSDLNYSHSHYDNYYGYPSQTNSDSYSYPSYGQYEHSDGRIGLINYKFR

Sequences:

>Translated_134_residues
MILLKHLIVVFNKKIYLCLKIAVNYFLRGLYMNQLIKSFFIAGLLCSFMSLGAQFDIGYRNGSQECHCSYECRCNPDWHD
GYKGNPSDLNYSHSHYDNYYGYPSQTNSDSYSYPSYGQYEHSDGRIGLINYKFR
>Mature_134_residues
MILLKHLIVVFNKKIYLCLKIAVNYFLRGLYMNQLIKSFFIAGLLCSFMSLGAQFDIGYRNGSQECHCSYECRCNPDWHD
GYKGNPSDLNYSHSHYDNYYGYPSQTNSDSYSYPSYGQYEHSDGRIGLINYKFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15670; Mature: 15670

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLKHLIVVFNKKIYLCLKIAVNYFLRGLYMNQLIKSFFIAGLLCSFMSLGAQFDIGYR
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
NGSQECHCSYECRCNPDWHDGYKGNPSDLNYSHSHYDNYYGYPSQTNSDSYSYPSYGQYE
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HSDGRIGLINYKFR
CCCCCEEEEEEECC
>Mature Secondary Structure
MILLKHLIVVFNKKIYLCLKIAVNYFLRGLYMNQLIKSFFIAGLLCSFMSLGAQFDIGYR
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
NGSQECHCSYECRCNPDWHDGYKGNPSDLNYSHSHYDNYYGYPSQTNSDSYSYPSYGQYE
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HSDGRIGLINYKFR
CCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA