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The map label for this gene is cyoC [H]

Identifier: 46446825

GI number: 46446825

Start: 1420493

End: 1421128

Strand: Direct

Name: cyoC [H]

Synonym: pc1191

Alternate gene names: 46446825

Gene position: 1420493-1421128 (Clockwise)

Preceding gene: 46446824

Following gene: 46446826

Centisome position: 58.83

GC content: 35.69

Gene sequence:

>636_bases
ATGAGTTCATCTTTAATAGTTCATCATCAAGATACCCTTGATCGGCAACCCGATATTCGTGCTCCAGATCCACATCAAGA
TACATTTTCTAAAACGTATTTCGGATTTTGGATGTATTTAATGACAGATTGTTTACTTTTTGCCACCCTTTTTTGTACAT
ATGCAGTTTTACATAAAAGTACGTTTGGAGGCCCTTCTTCACACGAACTATTCCAACTGCCAACAGCATTTATAGAAACA
TTGATCTTACTATTAAGTAGTATGACATGTGGATTAAGCATGCTCGCTGCCGTTAAAAGTCAAAAAAAATATGTGATCGG
ATGGTTGATTATTACATTCTGTTTAGGAAGTAGCTTTCTTTTCTTAGAAATTCAAGAGTTCTCTCTTCTGATTCGAGAAG
GAAATGGCTTTGATAGGAGCGCCTTTTTGTCCTCTTTCTTTACTCTCGTAGGAACGCATGGGTTGCATATTACATTTGGA
TTATTATGGATGATCGTGATGATTGCTCAAGTCATTTATCAAGGTATTACGCTTTCTACTTTTCGCCGTCTAGCCCTGTT
TAGCTTGTTTTGGCATTTTCTTGATTTAATTTGGATTTCGATATTTACATTTGTTTATTTACTGGGAGTAGCTTAA

Upstream 100 bases:

>100_bases
GTCTGATTGTTCGATTATCTCACGATGATCCTCATGAAGTCATTACTGTTGCTGAAATCAAAAAAATAGAAGCTTCCTAT
TCAAAGAGGTAATAAAACCA

Downstream 100 bases:

>100_bases
ATGTGTCATGAACTAAATTTAGATGATGTAAAGAAAGAATGGCATGGAACAATTAAATCTTATGTCATAGGCTTTACAGC
CTCGTTAATCTTAACACTCC

Product: cytochrome o ubiquinol oxidase chain III cyoC

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSSSLIVHHQDTLDRQPDIRAPDPHQDTFSKTYFGFWMYLMTDCLLFATLFCTYAVLHKSTFGGPSSHELFQLPTAFIET
LILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFLFLEIQEFSLLIREGNGFDRSAFLSSFFTLVGTHGLHITFG
LLWMIVMIAQVIYQGITLSTFRRLALFSLFWHFLDLIWISIFTFVYLLGVA

Sequences:

>Translated_211_residues
MSSSLIVHHQDTLDRQPDIRAPDPHQDTFSKTYFGFWMYLMTDCLLFATLFCTYAVLHKSTFGGPSSHELFQLPTAFIET
LILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFLFLEIQEFSLLIREGNGFDRSAFLSSFFTLVGTHGLHITFG
LLWMIVMIAQVIYQGITLSTFRRLALFSLFWHFLDLIWISIFTFVYLLGVA
>Mature_210_residues
SSSLIVHHQDTLDRQPDIRAPDPHQDTFSKTYFGFWMYLMTDCLLFATLFCTYAVLHKSTFGGPSSHELFQLPTAFIETL
ILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFLFLEIQEFSLLIREGNGFDRSAFLSSFFTLVGTHGLHITFGL
LWMIVMIAQVIYQGITLSTFRRLALFSLFWHFLDLIWISIFTFVYLLGVA

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=199, Percent_Identity=49.2462311557789, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 24087; Mature: 23955

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLIVHHQDTLDRQPDIRAPDPHQDTFSKTYFGFWMYLMTDCLLFATLFCTYAVLHKS
CCCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFGGPSSHELFQLPTAFIETLILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
FLEIQEFSLLIREGNGFDRSAFLSSFFTLVGTHGLHITFGLLWMIVMIAQVIYQGITLST
EEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
FRRLALFSLFWHFLDLIWISIFTFVYLLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSLIVHHQDTLDRQPDIRAPDPHQDTFSKTYFGFWMYLMTDCLLFATLFCTYAVLHKS
CCCEEEEECHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFGGPSSHELFQLPTAFIETLILLLSSMTCGLSMLAAVKSQKKYVIGWLIITFCLGSSFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
FLEIQEFSLLIREGNGFDRSAFLSSFFTLVGTHGLHITFGLLWMIVMIAQVIYQGITLST
EEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
FRRLALFSLFWHFLDLIWISIFTFVYLLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]