| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446818
Identifier: 46446818
GI number: 46446818
Start: 1412895
End: 1414538
Strand: Reverse
Name: 46446818
Synonym: pc1184
Alternate gene names: NA
Gene position: 1414538-1412895 (Counterclockwise)
Preceding gene: 46446822
Following gene: 46446817
Centisome position: 58.59
GC content: 31.14
Gene sequence:
>1644_bases ATGAAACTTCGATCTCTTTTTTTTAGCTTACTTTTTATAAGTCTCAGTATCTTACTTTTATTTTTTCTTGTTAGAGCTTG GATGCAAAAAGATATTTTTGAAGAAGATCAAAACCTTGTTTGGGTAGGGGCTATTATCGACAATCATGATCAATTGATTC CTCCTTTTCTACTAACGATCGAAAAATTGTATTATGATAAAGCAAAAATGCATTTGCAAATAGATTGTTGTAATCAAAAT AAGCATGTAAGAAAAATTGTGATGCAGTGGGTTGAAAAAAATAGGAAATTTTATCAGAGTCTTGTTTTTGTGGATCATAC TTCAAGTATAGATGAAAAAAAACATTTTATTGAAAAAAATAAAGTGCTTGCAAATATTAAAAATGGGTATTTGGCTAATT GTCAACAGCAAAGCTGCAATTATTGTTTGATATTATCTTCCGATATGCTTATTGCTCCTCATACGTTAAAATACCTAATA GAAAAAGATAAGCCCATTATTAGCCCACTTTTAAGACCTTTTCCACAACCTCATGATCCTTACCGTAATTTTTTTTGCGA TGTAACGGAAGAGGGATATTACAAACACCATGAAGACTATCTAGCAATTGCAAATCGACAAAAACTTGGAACTTTTCAAG TCCCTTGTGTGCATGGTGTTTATTTGATTCAAGCTCCATTCTTAAGTCAGCTGAGCTTTACCGAAGGATTTAAAAATTAT GAATTTTTAGCATTTTCTACATATGCTCGAAAAAAAAATATGGGTCAATTCATTTGCAATGAAAGGGAATTTGGCTTTCT CATGCATTTAAGCGATGATGCAACATTAGATCAACAGAAAAACTTTAAATTAGTGAATGCAGAAAAAGAAATTACACCTG CAATTTTTCATTCCATTCTTTCTCCTTATTTTACAAACGACTTTTATTTGAGTGAAATTGCAAAAGATTTTAATCTGGAT CAATACCAAATTTATCGTGTTTGCAATCGAGAACTTTTTTTATTAGACGAAAACAATGATCGCATTAAAAGTCATACCAT TAAGCAAGGTGCCAATTGGGAAGAACATTTTTATTCTCAATTTCAAAAATATGTAAAACCGGACACAATTGCGATCGATG TGGGTGCACATATAGGAACACACGCCTTAGCTCTCTCAAAATTAGTAGGAGAAAAAGGAAAGGTTTATGCATTCGAACCA CAAGCCAAAATATTTTGTGAACTCGCCATCAATATGTATTTAAATAATTGTCATCAGGTAGAGCTTTTTCACAAAGCTTT AGGGGTAAAAAAGGAGTGGAAAGCAATGCATATTCTTAAAGAAGGATATGAAATTGTTTCTTCTCCTTTTTATTTAGACA ATAAAAATAAAGTCCAAATTGTCGAGCTAGATAATTTTCATTTACACAATATTTCATTGATTAAAATCAATGTAGAAGAA TTTGTAATGGAAATTTTAGCCGGAGGATGGGAAACAATCCAAAGAAATAAACCTGTCATGATCGTCAAAATCTCTAATAA CGAGCAAAAACAAAATAAAATTCAAACCATTGAAAGTTTTGGATATGCCAGTTCAAAATTATCCGGTAATGATTATTTAT TTATCCCGTTAGCACAGTTAGGATTGCTAGAAGAACCAAATTAA
Upstream 100 bases:
>100_bases TAGTGAATTTTAGGCGAACTCTAAATTTTTTTCTTTTCGCATAAAATTTCTCGGCCATTACAAATTTCTCAATTAATTTA GCATCCAAAAATAAGGCTTT
Downstream 100 bases:
>100_bases AATGATACCTAATTACTCATGAAAATAGCATTCATATATTTCCATTATTGTTTATTCTTCTTTACCCCTATTTTATCAGC GCAAAATTCAACACCTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Glycosyl Transferase Family Protein; SAM-Dependent Methyltransferase; Procollagen-Lysine 5-Dioxygenase
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKLRSLFFSLLFISLSILLLFFLVRAWMQKDIFEEDQNLVWVGAIIDNHDQLIPPFLLTIEKLYYDKAKMHLQIDCCNQN KHVRKIVMQWVEKNRKFYQSLVFVDHTSSIDEKKHFIEKNKVLANIKNGYLANCQQQSCNYCLILSSDMLIAPHTLKYLI EKDKPIISPLLRPFPQPHDPYRNFFCDVTEEGYYKHHEDYLAIANRQKLGTFQVPCVHGVYLIQAPFLSQLSFTEGFKNY EFLAFSTYARKKNMGQFICNEREFGFLMHLSDDATLDQQKNFKLVNAEKEITPAIFHSILSPYFTNDFYLSEIAKDFNLD QYQIYRVCNRELFLLDENNDRIKSHTIKQGANWEEHFYSQFQKYVKPDTIAIDVGAHIGTHALALSKLVGEKGKVYAFEP QAKIFCELAINMYLNNCHQVELFHKALGVKKEWKAMHILKEGYEIVSSPFYLDNKNKVQIVELDNFHLHNISLIKINVEE FVMEILAGGWETIQRNKPVMIVKISNNEQKQNKIQTIESFGYASSKLSGNDYLFIPLAQLGLLEEPN
Sequences:
>Translated_547_residues MKLRSLFFSLLFISLSILLLFFLVRAWMQKDIFEEDQNLVWVGAIIDNHDQLIPPFLLTIEKLYYDKAKMHLQIDCCNQN KHVRKIVMQWVEKNRKFYQSLVFVDHTSSIDEKKHFIEKNKVLANIKNGYLANCQQQSCNYCLILSSDMLIAPHTLKYLI EKDKPIISPLLRPFPQPHDPYRNFFCDVTEEGYYKHHEDYLAIANRQKLGTFQVPCVHGVYLIQAPFLSQLSFTEGFKNY EFLAFSTYARKKNMGQFICNEREFGFLMHLSDDATLDQQKNFKLVNAEKEITPAIFHSILSPYFTNDFYLSEIAKDFNLD QYQIYRVCNRELFLLDENNDRIKSHTIKQGANWEEHFYSQFQKYVKPDTIAIDVGAHIGTHALALSKLVGEKGKVYAFEP QAKIFCELAINMYLNNCHQVELFHKALGVKKEWKAMHILKEGYEIVSSPFYLDNKNKVQIVELDNFHLHNISLIKINVEE FVMEILAGGWETIQRNKPVMIVKISNNEQKQNKIQTIESFGYASSKLSGNDYLFIPLAQLGLLEEPN >Mature_547_residues MKLRSLFFSLLFISLSILLLFFLVRAWMQKDIFEEDQNLVWVGAIIDNHDQLIPPFLLTIEKLYYDKAKMHLQIDCCNQN KHVRKIVMQWVEKNRKFYQSLVFVDHTSSIDEKKHFIEKNKVLANIKNGYLANCQQQSCNYCLILSSDMLIAPHTLKYLI EKDKPIISPLLRPFPQPHDPYRNFFCDVTEEGYYKHHEDYLAIANRQKLGTFQVPCVHGVYLIQAPFLSQLSFTEGFKNY EFLAFSTYARKKNMGQFICNEREFGFLMHLSDDATLDQQKNFKLVNAEKEITPAIFHSILSPYFTNDFYLSEIAKDFNLD QYQIYRVCNRELFLLDENNDRIKSHTIKQGANWEEHFYSQFQKYVKPDTIAIDVGAHIGTHALALSKLVGEKGKVYAFEP QAKIFCELAINMYLNNCHQVELFHKALGVKKEWKAMHILKEGYEIVSSPFYLDNKNKVQIVELDNFHLHNISLIKINVEE FVMEILAGGWETIQRNKPVMIVKISNNEQKQNKIQTIESFGYASSKLSGNDYLFIPLAQLGLLEEPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI193788560, Length=234, Percent_Identity=25.6410256410256, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI16506820, Length=242, Percent_Identity=24.7933884297521, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI31377697, Length=267, Percent_Identity=25.4681647940075, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI32307144, Length=247, Percent_Identity=25.9109311740891, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI62739166, Length=247, Percent_Identity=27.5303643724696, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI33636742, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581946, Length=295, Percent_Identity=23.0508474576271, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24662595, Length=247, Percent_Identity=27.5303643724696, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24662591, Length=247, Percent_Identity=27.5303643724696, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63960; Mature: 63960
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRSLFFSLLFISLSILLLFFLVRAWMQKDIFEEDQNLVWVGAIIDNHDQLIPPFLLTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH EKLYYDKAKMHLQIDCCNQNKHVRKIVMQWVEKNRKFYQSLVFVDHTSSIDEKKHFIEKN HHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH KVLANIKNGYLANCQQQSCNYCLILSSDMLIAPHTLKYLIEKDKPIISPLLRPFPQPHDP HHHEECCCCCCCCCHHCCCCEEEEECCCCEECCHHHHHHHHCCCCHHHHHHHCCCCCCCC YRNFFCDVTEEGYYKHHEDYLAIANRQKLGTFQVPCVHGVYLIQAPFLSQLSFTEGFKNY HHHHEECCCCCCCCCCCCCHHEECCCCCCCCEECCHHCCEEEEECHHHHHHHHHCCCCCC EFLAFSTYARKKNMGQFICNEREFGFLMHLSDDATLDQQKNFKLVNAEKEITPAIFHSIL EEEEEEHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHCCHHHHHHHH SPYFTNDFYLSEIAKDFNLDQYQIYRVCNRELFLLDENNDRIKSHTIKQGANWEEHFYSQ HHHHCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHH FQKYVKPDTIAIDVGAHIGTHALALSKLVGEKGKVYAFEPQAKIFCELAINMYLNNCHQV HHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH ELFHKALGVKKEWKAMHILKEGYEIVSSPFYLDNKNKVQIVELDNFHLHNISLIKINVEE HHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEEEEEEEHHH FVMEILAGGWETIQRNKPVMIVKISNNEQKQNKIQTIESFGYASSKLSGNDYLFIPLAQL HHHHHHHCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHC GLLEEPN CCCCCCC >Mature Secondary Structure MKLRSLFFSLLFISLSILLLFFLVRAWMQKDIFEEDQNLVWVGAIIDNHDQLIPPFLLTI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHH EKLYYDKAKMHLQIDCCNQNKHVRKIVMQWVEKNRKFYQSLVFVDHTSSIDEKKHFIEKN HHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHH KVLANIKNGYLANCQQQSCNYCLILSSDMLIAPHTLKYLIEKDKPIISPLLRPFPQPHDP HHHEECCCCCCCCCHHCCCCEEEEECCCCEECCHHHHHHHHCCCCHHHHHHHCCCCCCCC YRNFFCDVTEEGYYKHHEDYLAIANRQKLGTFQVPCVHGVYLIQAPFLSQLSFTEGFKNY HHHHEECCCCCCCCCCCCCHHEECCCCCCCCEECCHHCCEEEEECHHHHHHHHHCCCCCC EFLAFSTYARKKNMGQFICNEREFGFLMHLSDDATLDQQKNFKLVNAEKEITPAIFHSIL EEEEEEHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCHHCCHHHHHHHH SPYFTNDFYLSEIAKDFNLDQYQIYRVCNRELFLLDENNDRIKSHTIKQGANWEEHFYSQ HHHHCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHH FQKYVKPDTIAIDVGAHIGTHALALSKLVGEKGKVYAFEPQAKIFCELAINMYLNNCHQV HHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH ELFHKALGVKKEWKAMHILKEGYEIVSSPFYLDNKNKVQIVELDNFHLHNISLIKINVEE HHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEEEEEEEHHH FVMEILAGGWETIQRNKPVMIVKISNNEQKQNKIQTIESFGYASSKLSGNDYLFIPLAQL HHHHHHHCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHC GLLEEPN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA