| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is wbdA
Identifier: 46446817
GI number: 46446817
Start: 1411656
End: 1412741
Strand: Reverse
Name: wbdA
Synonym: pc1183
Alternate gene names: NA
Gene position: 1412741-1411656 (Counterclockwise)
Preceding gene: 46446818
Following gene: 46446811
Centisome position: 58.51
GC content: 36.74
Gene sequence:
>1086_bases TTGGGAAGTTTGTCTCTTGTCAATCAAAGTTTTTCAAAACAATTAATGCAGGTACCGGGAGTTAAATTAACTTGCGTATC AAATAGAAATTTAAGTTCCTTGCAAACTTTAGCAGACCCCAGAGTAATTGATGAATTGAAAAATTGGGTTCACATTGTAA AAATAGAATCTACCCAAGAAGCTCAAATTACAGTGCGACATAGTTGGCCTCCTAATTGGCAAGCACCTAAAAAAGGAAAA TGGGTTTTAATGCAGCCTTGGGAGTATGGCTATATCCCTTTAGAATGGATTGAAAATATTAAAAAAGTTGATGAAGTTTG GGTTCCCACGCATTTTGTTAAGCGTGAATTTGTAGAGTCTGGTGTTCCAGAAAGTAAAGTTGTTGTGATACCCAATGGGG TTGACTGTCTGACATTTAATCCGCAAATTGAACCTTTTCCTCTCAAAACAAATAAAAAATTTAAATTCCTTTTTTTAGGA GGCACAATTTATCGAAAAGGTCCTGATTTACTTCTGACAAGTTATTTAAAAACTTTTACTAACTTCGATGATGTCTGTTT GGTTGTCAAAGATGTGGGAGTTAAAGAGGCGTATGCAGGACAAACATATGAAAAAATGTTTAAAGAGTTTCAAGACAAAC CTAATGCGCCCGAAATTATTTATCTTGATGAAAATTTAACCGCGAATCAAATTGCAAGTATTTATAAAGCCTGTGATTGT TTAGTACATCCCTATAGAGGAGAGGGATTTGGTCTCCCGGTTTTAGAAGCGATGGCTTGTGGTTTGCCAGTTCTTGTGAC TAAAGGGGGAGCAACAGATGATTTTGTGACAAATGCCTATGGATGGCTAATTCCTTCTTTAAAAAAATCGATAGGTTTAC ATTTTAGTGGTTACACGCTTGCAGGAGAAGGTTGGTTAATGGAACCAGACATAGAGGCTTTGTCAATGCAAATGCGTTGG ATTGCTAATCATCCCTTTATTGCAAAATCTAAAGGTGCGGCTGCGAGTCAGTATGTTAAAGAGCATTGGACTTGGCAAAA AGCGGCAGAACAAGCATTAAATCGTTTAAAACTAATCGCTAACTAG
Upstream 100 bases:
>100_bases ATTCTTCTTTACCCCTATTTTATCAGCGCAAAATTCAACACCTGCTATTAACCAGGAACCAGCTCCGTTATCTATTGTTT GGGAAGGGTCTTTTTTAGAC
Downstream 100 bases:
>100_bases CAACTGTATTTAAGTTTTAAAAAAAAGATTGAACTGACTTTATACACTAGTCCCAACGCCATGTGCTCTCATTTGGAAGG AAGTTCGCCGTAATGAAGGA
Product: putative mannosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Mannosyltransferase; Glycosyl Transferase Family Protein; Methyltransferase Type; Glycosyl Transferase Group 1 Family Protein; TPR Repeat-Containing Glycosyl Transferase; Bifunctional Glycosyltransferase
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MGSLSLVNQSFSKQLMQVPGVKLTCVSNRNLSSLQTLADPRVIDELKNWVHIVKIESTQEAQITVRHSWPPNWQAPKKGK WVLMQPWEYGYIPLEWIENIKKVDEVWVPTHFVKREFVESGVPESKVVVIPNGVDCLTFNPQIEPFPLKTNKKFKFLFLG GTIYRKGPDLLLTSYLKTFTNFDDVCLVVKDVGVKEAYAGQTYEKMFKEFQDKPNAPEIIYLDENLTANQIASIYKACDC LVHPYRGEGFGLPVLEAMACGLPVLVTKGGATDDFVTNAYGWLIPSLKKSIGLHFSGYTLAGEGWLMEPDIEALSMQMRW IANHPFIAKSKGAAASQYVKEHWTWQKAAEQALNRLKLIAN
Sequences:
>Translated_361_residues MGSLSLVNQSFSKQLMQVPGVKLTCVSNRNLSSLQTLADPRVIDELKNWVHIVKIESTQEAQITVRHSWPPNWQAPKKGK WVLMQPWEYGYIPLEWIENIKKVDEVWVPTHFVKREFVESGVPESKVVVIPNGVDCLTFNPQIEPFPLKTNKKFKFLFLG GTIYRKGPDLLLTSYLKTFTNFDDVCLVVKDVGVKEAYAGQTYEKMFKEFQDKPNAPEIIYLDENLTANQIASIYKACDC LVHPYRGEGFGLPVLEAMACGLPVLVTKGGATDDFVTNAYGWLIPSLKKSIGLHFSGYTLAGEGWLMEPDIEALSMQMRW IANHPFIAKSKGAAASQYVKEHWTWQKAAEQALNRLKLIAN >Mature_360_residues GSLSLVNQSFSKQLMQVPGVKLTCVSNRNLSSLQTLADPRVIDELKNWVHIVKIESTQEAQITVRHSWPPNWQAPKKGKW VLMQPWEYGYIPLEWIENIKKVDEVWVPTHFVKREFVESGVPESKVVVIPNGVDCLTFNPQIEPFPLKTNKKFKFLFLGG TIYRKGPDLLLTSYLKTFTNFDDVCLVVKDVGVKEAYAGQTYEKMFKEFQDKPNAPEIIYLDENLTANQIASIYKACDCL VHPYRGEGFGLPVLEAMACGLPVLVTKGGATDDFVTNAYGWLIPSLKKSIGLHFSGYTLAGEGWLMEPDIEALSMQMRWI ANHPFIAKSKGAAASQYVKEHWTWQKAAEQALNRLKLIAN
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40815; Mature: 40683
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLSLVNQSFSKQLMQVPGVKLTCVSNRNLSSLQTLADPRVIDELKNWVHIVKIESTQE CCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCEEEEEEECCCC AQITVRHSWPPNWQAPKKGKWVLMQPWEYGYIPLEWIENIKKVDEVWVPTHFVKREFVES EEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHC GVPESKVVVIPNGVDCLTFNPQIEPFPLKTNKKFKFLFLGGTIYRKGPDLLLTSYLKTFT CCCCCEEEEECCCCEEEEECCCCCCEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHC NFDDVCLVVKDVGVKEAYAGQTYEKMFKEFQDKPNAPEIIYLDENLTANQIASIYKACDC CCCCEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH LVHPYRGEGFGLPVLEAMACGLPVLVTKGGATDDFVTNAYGWLIPSLKKSIGLHFSGYTL HCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEECCEEE AGEGWLMEPDIEALSMQMRWIANHPFIAKSKGAAASQYVKEHWTWQKAAEQALNRLKLIA ECCCEEECCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC N C >Mature Secondary Structure GSLSLVNQSFSKQLMQVPGVKLTCVSNRNLSSLQTLADPRVIDELKNWVHIVKIESTQE CCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHHHHCCEEEEEEECCCC AQITVRHSWPPNWQAPKKGKWVLMQPWEYGYIPLEWIENIKKVDEVWVPTHFVKREFVES EEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHC GVPESKVVVIPNGVDCLTFNPQIEPFPLKTNKKFKFLFLGGTIYRKGPDLLLTSYLKTFT CCCCCEEEEECCCCEEEEECCCCCCEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHC NFDDVCLVVKDVGVKEAYAGQTYEKMFKEFQDKPNAPEIIYLDENLTANQIASIYKACDC CCCCEEEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH LVHPYRGEGFGLPVLEAMACGLPVLVTKGGATDDFVTNAYGWLIPSLKKSIGLHFSGYTL HCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEECCEEE AGEGWLMEPDIEALSMQMRWIANHPFIAKSKGAAASQYVKEHWTWQKAAEQALNRLKLIA ECCCEEECCCHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA