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The map label for this gene is tspO

Identifier: 46446822

GI number: 46446822

Start: 1416865

End: 1417329

Strand: Reverse

Name: tspO

Synonym: pc1188

Alternate gene names: NA

Gene position: 1417329-1416865 (Counterclockwise)

Preceding gene: 46446832

Following gene: 46446818

Centisome position: 58.7

GC content: 32.47

Gene sequence:

>465_bases
ATGAGTCATATTTTAAAATTAGTGATTTGTTTGTTGATTTGCGTCGGAGGGGGTTGGGCATGTGGCTGGATCACTTCCTC
TAGTGTTCATCAGTGGTATCCAACGCTTATAAAATCATCTCTTACTCCTCCTAATATTGTCTTTCCTATTGTTTGGACCT
TTCTTTATGTATTCATGGCTATTGCATTATATTTGATTTGGATCAGCCCTACAAAAAATAAAAAGCCTGCTTTTTTTATT
TTTGGTGTTCAACTTATTTGTAATTTTCTTTGGTCGTGGATTTTTTTCTATTTACAACTCCCTTTTATAGCTTTGTTGAA
TTTGATGATTTTATGGGGATTAGTTTTAAACACAATAAACGTGTTTTATCAACACTCTAAACTGGCTAGCCAACTTTTAT
GGCCTTATTGGATTTGGATCAGTTTCGCTTGGTACTTAAATGCATTTATTGTTTTTTATAATTAA

Upstream 100 bases:

>100_bases
ATGGCTATTAAAACTTACAGAAAGAAGATGAATTGATGGCAAAATACGTATACAGACTATTTAAAAGGTTTTATGCGTGA
AGTAATAAGAGGGCGGAAGG

Downstream 100 bases:

>100_bases
TAGGCGTCAAAAGTAGAGATTTGCAGGGAAATAGGGCGATTAAATAGGATGAATAGGACAAATAAAGGAAAGATCAATCG
AAAAAGAGAAGGGATAATTA

Product: putative outer membrane protein tspO

Products: NA

Alternate protein names: Tryptophan-Rich Sensory Protein; TspO/MBR Family Protein; Integral Membrane Protein; CrtK Protein; TspO And MBR Like Proteins; Sensory Protein; TspO Or MBR Like Protein; Benzodiazepine Receptor TspO; Outer Membrane Protein TspO; DNA Gyrase Inhibitor; TspO And MBR Family Protein; Peripheral-Type Benzodiazepine Receptor; Tryptophan-Rich Sensory Protein TSPO-Like Protein; Tryptophan-Rich Sensory Protein Tspo; Protein CrtK; TspO/MBR-Related Protein; TspO-And MBR-Like Protein; Transmembrane TspO/MBR Tryptophan-Rich Family Protein; Tspo/Mbr Family Protein; Tryptophan Rich Sensory Protein; TspO And MBR Related Proteins; TspO And MBR-Like Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSHILKLVICLLICVGGGWACGWITSSSVHQWYPTLIKSSLTPPNIVFPIVWTFLYVFMAIALYLIWISPTKNKKPAFFI
FGVQLICNFLWSWIFFYLQLPFIALLNLMILWGLVLNTINVFYQHSKLASQLLWPYWIWISFAWYLNAFIVFYN

Sequences:

>Translated_154_residues
MSHILKLVICLLICVGGGWACGWITSSSVHQWYPTLIKSSLTPPNIVFPIVWTFLYVFMAIALYLIWISPTKNKKPAFFI
FGVQLICNFLWSWIFFYLQLPFIALLNLMILWGLVLNTINVFYQHSKLASQLLWPYWIWISFAWYLNAFIVFYN
>Mature_153_residues
SHILKLVICLLICVGGGWACGWITSSSVHQWYPTLIKSSLTPPNIVFPIVWTFLYVFMAIALYLIWISPTKNKKPAFFIF
GVQLICNFLWSWIFFYLQLPFIALLNLMILWGLVLNTINVFYQHSKLASQLLWPYWIWISFAWYLNAFIVFYN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI19920472, Length=150, Percent_Identity=30, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18155; Mature: 18024

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHILKLVICLLICVGGGWACGWITSSSVHQWYPTLIKSSLTPPNIVFPIVWTFLYVFMA
CHHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IALYLIWISPTKNKKPAFFIFGVQLICNFLWSWIFFYLQLPFIALLNLMILWGLVLNTIN
HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYQHSKLASQLLWPYWIWISFAWYLNAFIVFYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
>Mature Secondary Structure 
SHILKLVICLLICVGGGWACGWITSSSVHQWYPTLIKSSLTPPNIVFPIVWTFLYVFMA
HHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
IALYLIWISPTKNKKPAFFIFGVQLICNFLWSWIFFYLQLPFIALLNLMILWGLVLNTIN
HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYQHSKLASQLLWPYWIWISFAWYLNAFIVFYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA