| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is mhpC [H]
Identifier: 46446765
GI number: 46446765
Start: 1358842
End: 1359810
Strand: Direct
Name: mhpC [H]
Synonym: pc1131
Alternate gene names: 46446765
Gene position: 1358842-1359810 (Clockwise)
Preceding gene: 46446762
Following gene: 46446766
Centisome position: 56.28
GC content: 34.88
Gene sequence:
>969_bases ATGAGAAAATTTCTTTATCGTTTCATTTTTCCAAGTTTTACTATTTTGGCAGTATTATTTACCTTGTACTTTTTTACAGC TATTTCCTTGTTGGAAGCGGAAAAACAAGACGAGCTAAAAAAAGGAAAATTATTTTGGGAATGGCAAACTCCGCAAGGAA ATTGGCAAGTCCATTACACTGAACATGGATCTGGCTCTAAACACCTTTTACTTATCCACGGTTTTCGTGCTCATTCTTTT ACTTGGAGGTACTTAATAGAACCTCTAACACAAGCTGGTTATCATGTTTGGACAATTGATCTAATCGGATATGGATTAAG TGATAAACCCTTAAATGCTGCGTATGATGCCGATTTCTTTATCGAACAGTTAAAATCTTTTATGGATGCAAAACAAATTT CTTCCGCTCATTTAATCGGAAGTTCGATGGGAGGTGGCTTAGCTTTAAATTTAACATTAGATTACCCTGAAAAAGTGAGC TCTTTAACACTAATTAATGCTTTAGGATATCCTCTTGATCTTCCTTTTTATCTTTATTTAACAAGGCACCTTGACCCCTT ATGGTTTTCCTTTGTTTCTCCGCCAGTCATAAGGATTGGATTGAAGCAAATTGTATTTGATCCAGATACTGTTTCTGAGG AACAAGTTTTAGCTTATTCTTTCCCATATCAATTTCCAGGCGGAACACAGGCGTCCTTAACAACCTTAAAACAATTTGAC AAACAAAAGTTAGTCGATTTAAGCCAACGATACCATTCTCTCAAACATCCTTTGTTAATTATTTGGGGAGATAAAGACAA ATTAATTCCCATTACCCATTATGAAAGATTTGTTAAAGAATTTCCACAAGCCGATTGCCTTTTAATTCCTAACTGTGGCC ATATTCCTCATGAAGAAAAACCCATTTTAGTAACAGAAACGATTTTGGAGTTTCTTGGCAAACATATTGATCGTTCAAAT AGCGATTAA
Upstream 100 bases:
>100_bases AGTTTGCACTCTCTGTCGAAAGTGAAATCGCAAGAAAGGCTTTATCCGATTTAGCCACCCTAAGTATGATTAACTAAAGA TTTTTGTTTGTGAGCATAAA
Downstream 100 bases:
>100_bases AATCTTTCTATTTGCTGAGTTATTTTCCAAACTTAATCATTGAAGTTTTATTTCACTAATAAAAAAGGCATATTGAATAT GTCCATTCAATAAACGTTTG
Product: hypothetical protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRKFLYRFIFPSFTILAVLFTLYFFTAISLLEAEKQDELKKGKLFWEWQTPQGNWQVHYTEHGSGSKHLLLIHGFRAHSF TWRYLIEPLTQAGYHVWTIDLIGYGLSDKPLNAAYDADFFIEQLKSFMDAKQISSAHLIGSSMGGGLALNLTLDYPEKVS SLTLINALGYPLDLPFYLYLTRHLDPLWFSFVSPPVIRIGLKQIVFDPDTVSEEQVLAYSFPYQFPGGTQASLTTLKQFD KQKLVDLSQRYHSLKHPLLIIWGDKDKLIPITHYERFVKEFPQADCLLIPNCGHIPHEEKPILVTETILEFLGKHIDRSN SD
Sequences:
>Translated_322_residues MRKFLYRFIFPSFTILAVLFTLYFFTAISLLEAEKQDELKKGKLFWEWQTPQGNWQVHYTEHGSGSKHLLLIHGFRAHSF TWRYLIEPLTQAGYHVWTIDLIGYGLSDKPLNAAYDADFFIEQLKSFMDAKQISSAHLIGSSMGGGLALNLTLDYPEKVS SLTLINALGYPLDLPFYLYLTRHLDPLWFSFVSPPVIRIGLKQIVFDPDTVSEEQVLAYSFPYQFPGGTQASLTTLKQFD KQKLVDLSQRYHSLKHPLLIIWGDKDKLIPITHYERFVKEFPQADCLLIPNCGHIPHEEKPILVTETILEFLGKHIDRSN SD >Mature_322_residues MRKFLYRFIFPSFTILAVLFTLYFFTAISLLEAEKQDELKKGKLFWEWQTPQGNWQVHYTEHGSGSKHLLLIHGFRAHSF TWRYLIEPLTQAGYHVWTIDLIGYGLSDKPLNAAYDADFFIEQLKSFMDAKQISSAHLIGSSMGGGLALNLTLDYPEKVS SLTLINALGYPLDLPFYLYLTRHLDPLWFSFVSPPVIRIGLKQIVFDPDTVSEEQVLAYSFPYQFPGGTQASLTTLKQFD KQKLVDLSQRYHSLKHPLLIIWGDKDKLIPITHYERFVKEFPQADCLLIPNCGHIPHEEKPILVTETILEFLGKHIDRSN SD
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI218777837, Length=291, Percent_Identity=25.4295532646048, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI189027141, Length=306, Percent_Identity=24.5098039215686, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27597073, Length=112, Percent_Identity=36.6071428571429, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI218777840, Length=283, Percent_Identity=22.6148409893993, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI13376164, Length=283, Percent_Identity=22.6148409893993, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081721, Length=266, Percent_Identity=25.9398496240602, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6324392, Length=283, Percent_Identity=24.7349823321555, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 37116; Mature: 37116
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFLYRFIFPSFTILAVLFTLYFFTAISLLEAEKQDELKKGKLFWEWQTPQGNWQVHYT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEE EHGSGSKHLLLIHGFRAHSFTWRYLIEPLTQAGYHVWTIDLIGYGLSDKPLNAAYDADFF ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHH IEQLKSFMDAKQISSAHLIGSSMGGGLALNLTLDYPEKVSSLTLINALGYPLDLPFYLYL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHH TRHLDPLWFSFVSPPVIRIGLKQIVFDPDTVSEEQVLAYSFPYQFPGGTQASLTTLKQFD HHHCCHHHHHHCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH KQKLVDLSQRYHSLKHPLLIIWGDKDKLIPITHYERFVKEFPQADCLLIPNCGHIPHEEK HHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCC PILVTETILEFLGKHIDRSNSD CEEHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRKFLYRFIFPSFTILAVLFTLYFFTAISLLEAEKQDELKKGKLFWEWQTPQGNWQVHYT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEE EHGSGSKHLLLIHGFRAHSFTWRYLIEPLTQAGYHVWTIDLIGYGLSDKPLNAAYDADFF ECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHH IEQLKSFMDAKQISSAHLIGSSMGGGLALNLTLDYPEKVSSLTLINALGYPLDLPFYLYL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHH TRHLDPLWFSFVSPPVIRIGLKQIVFDPDTVSEEQVLAYSFPYQFPGGTQASLTTLKQFD HHHCCHHHHHHCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH KQKLVDLSQRYHSLKHPLLIIWGDKDKLIPITHYERFVKEFPQADCLLIPNCGHIPHEEK HHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCC PILVTETILEFLGKHIDRSNSD CEEHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA