| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is menE [H]
Identifier: 46446696
GI number: 46446696
Start: 1263309
End: 1264442
Strand: Reverse
Name: menE [H]
Synonym: pc1062
Alternate gene names: 46446696
Gene position: 1264442-1263309 (Counterclockwise)
Preceding gene: 46446697
Following gene: 46446692
Centisome position: 52.37
GC content: 36.95
Gene sequence:
>1134_bases ATGAAAATTGATTGGATAAGTTCCGAATCAAGAGTTTTTTTAAATCCCAGTTATGGCGTTGAAAAACAACAACTTTACTT AAAAATACTCAAGAAAACTAAAAATCTTGATAGTCACTTTTGGCTTTCTACGTCAGGTTCCACTAGCCAAAAATGGGTTG GTTTATCCAAAAAAGCAATTTTAGCTTCCGCTGAATCTGTGAATAAACATATTGAAGCCAAATTTTGTGATCGTTGGGTG ACTGCCTTACCCGATTTTCATGTCGGAGGACTTGGAATTTGGGCTAGAGCCTTTTTGAGTGACTCTCAGGTTTTTGATTT TAAAACAATTCAAAATGGGAAGTGGGATCCTAAAATTTTCTGGAGTTTTGTAAGGGAAATGAAAGGAACTTTAACGGCTT TAGTCCCGACTCAAATTTATGACTTAGTGCAATTAGCTTTACCAGCTCCCAATAGTTTAAGGGCCGTTATAGTAGGAGGT GGTAGGTTGTTACCTGACTTATATAAGAAAGCTGTTGAATTAGGGTGGCCTTTAATGCCAAGTTATGGTTTGACAGAATG CTGTTCTCAAGTCGCGACAGCTACCCTTGGAAGCTGGCAGTTTTCCACTTATCCCTCTTTGCAAATTCTAACTCACATTA GTGTGAGAGAAAGAGATGGACATTTGGAATATAAAAGCCCTTCTTTGCTTACCTGTTATGCCTATTTTGAGCAAGATCAA ATTTATTTACACGACCCAAAAGTTGAGGGGTGGTTTAGATGTGGGGATCTAGGCAATCTACAAGGGAATATATTGAATGT GAAAGGTCGCTCTGATCATTTGCTTAAAATTGGGGGGGAAAGTGTTGATTTGAGTCAATTAGAGGCTCATTTGGAATCAA TTTTACTAAAAAATTCTTCTGCTGGAATGGCTGTTTTAGTGGCGGTACCAGATGAAAGATTAGGAAATATTTTATATTTA GCTGTTGAACAAAATAAGCGGGAGATATTAAAGCCATTAATAGGCCTTTATCAGCAAACAGTTCTTCCTTTTGAGCGGAT TCGAAACGTTATTGCTGTTGAAAATATTCCCCGTTCACCTCTAGGAAAAATATTAAAAAGCGAGCTGATTAAATTAATAA CTTTGAACGAATAA
Upstream 100 bases:
>100_bases TAGTTTTGCGCAAAGTATTTTGTTAATTTTTAGTTTTGGTTTATTGTTGGCCGTAGCTTGTTTGATGCGTATAGCCGAAT GAACGTTGGAAATAATTTGT
Downstream 100 bases:
>100_bases ACAAATCCTCAAAAATATAATTCTAATTGGCTTTTAATTTCATTGGGGATTAGAAGTTTATCCTTACTTTGTCGATTACA AAATACGTGAATGGTTTTGA
Product: putative o-succinylbenzoate-CoA ligase, menE
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKIDWISSESRVFLNPSYGVEKQQLYLKILKKTKNLDSHFWLSTSGSTSQKWVGLSKKAILASAESVNKHIEAKFCDRWV TALPDFHVGGLGIWARAFLSDSQVFDFKTIQNGKWDPKIFWSFVREMKGTLTALVPTQIYDLVQLALPAPNSLRAVIVGG GRLLPDLYKKAVELGWPLMPSYGLTECCSQVATATLGSWQFSTYPSLQILTHISVRERDGHLEYKSPSLLTCYAYFEQDQ IYLHDPKVEGWFRCGDLGNLQGNILNVKGRSDHLLKIGGESVDLSQLEAHLESILLKNSSAGMAVLVAVPDERLGNILYL AVEQNKREILKPLIGLYQQTVLPFERIRNVIAVENIPRSPLGKILKSELIKLITLNE
Sequences:
>Translated_377_residues MKIDWISSESRVFLNPSYGVEKQQLYLKILKKTKNLDSHFWLSTSGSTSQKWVGLSKKAILASAESVNKHIEAKFCDRWV TALPDFHVGGLGIWARAFLSDSQVFDFKTIQNGKWDPKIFWSFVREMKGTLTALVPTQIYDLVQLALPAPNSLRAVIVGG GRLLPDLYKKAVELGWPLMPSYGLTECCSQVATATLGSWQFSTYPSLQILTHISVRERDGHLEYKSPSLLTCYAYFEQDQ IYLHDPKVEGWFRCGDLGNLQGNILNVKGRSDHLLKIGGESVDLSQLEAHLESILLKNSSAGMAVLVAVPDERLGNILYL AVEQNKREILKPLIGLYQQTVLPFERIRNVIAVENIPRSPLGKILKSELIKLITLNE >Mature_377_residues MKIDWISSESRVFLNPSYGVEKQQLYLKILKKTKNLDSHFWLSTSGSTSQKWVGLSKKAILASAESVNKHIEAKFCDRWV TALPDFHVGGLGIWARAFLSDSQVFDFKTIQNGKWDPKIFWSFVREMKGTLTALVPTQIYDLVQLALPAPNSLRAVIVGG GRLLPDLYKKAVELGWPLMPSYGLTECCSQVATATLGSWQFSTYPSLQILTHISVRERDGHLEYKSPSLLTCYAYFEQDQ IYLHDPKVEGWFRCGDLGNLQGNILNVKGRSDHLLKIGGESVDLSQLEAHLESILLKNSSAGMAVLVAVPDERLGNILYL AVEQNKREILKPLIGLYQQTVLPFERIRNVIAVENIPRSPLGKILKSELIKLITLNE
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319699, Length=357, Percent_Identity=25.4901960784314, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 42358; Mature: 42358
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDWISSESRVFLNPSYGVEKQQLYLKILKKTKNLDSHFWLSTSGSTSQKWVGLSKKAI CEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHHH LASAESVNKHIEAKFCDRWVTALPDFHVGGLGIWARAFLSDSQVFDFKTIQNGKWDPKIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH WSFVREMKGTLTALVPTQIYDLVQLALPAPNSLRAVIVGGGRLLPDLYKKAVELGWPLMP HHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC SYGLTECCSQVATATLGSWQFSTYPSLQILTHISVRERDGHLEYKSPSLLTCYAYFEQDQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCCEEEEEEEECCCE IYLHDPKVEGWFRCGDLGNLQGNILNVKGRSDHLLKIGGESVDLSQLEAHLESILLKNSS EEEECCCCCCEEEECCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC AGMAVLVAVPDERLGNILYLAVEQNKREILKPLIGLYQQTVLPFERIRNVIAVENIPRSP CCEEEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCH LGKILKSELIKLITLNE HHHHHHHHHHHHEECCC >Mature Secondary Structure MKIDWISSESRVFLNPSYGVEKQQLYLKILKKTKNLDSHFWLSTSGSTSQKWVGLSKKAI CEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHHH LASAESVNKHIEAKFCDRWVTALPDFHVGGLGIWARAFLSDSQVFDFKTIQNGKWDPKIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHH WSFVREMKGTLTALVPTQIYDLVQLALPAPNSLRAVIVGGGRLLPDLYKKAVELGWPLMP HHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC SYGLTECCSQVATATLGSWQFSTYPSLQILTHISVRERDGHLEYKSPSLLTCYAYFEQDQ CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCCEEEEEEEECCCE IYLHDPKVEGWFRCGDLGNLQGNILNVKGRSDHLLKIGGESVDLSQLEAHLESILLKNSS EEEECCCCCCEEEECCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC AGMAVLVAVPDERLGNILYLAVEQNKREILKPLIGLYQQTVLPFERIRNVIAVENIPRSP CCEEEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCH LGKILKSELIKLITLNE HHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]