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The map label for this gene is insC1 [C]

Identifier: 46446635

GI number: 46446635

Start: 1192289

End: 1192666

Strand: Reverse

Name: insC1 [C]

Synonym: pc1001

Alternate gene names: 46446635

Gene position: 1192666-1192289 (Counterclockwise)

Preceding gene: 46446640

Following gene: 46446634

Centisome position: 49.4

GC content: 37.3

Gene sequence:

>378_bases
ATGACTAATTGTAAATTAATTACATCAGTAGAAAGAAGAAGACGATGGTCCCTAGAAGAAAAAAAACAGATCATTGAAAA
AACATATCAAGAAGGTCAATCTGTCTCCCAAATAGCAAGGAGATATGATATAACACCAAGTCAACTTTTTGCATGGAGAA
GGCAGATGGAACAAGGAGCATTACAAGGAATTAGCAGCCGAGAAGAACTAGTTCCCAAAAGCCAAGTGAAAGAAATGGAA
AAGCGAATAAGAGAACTAGAGCGGATGCTAGGGAAAAAGACATTTGAAAATGAAATTTTAAAAGAGGCTGTAAGGCTTGG
GCAGGAAAAAAAACTCATCTTGCGGCAGCCATTGCCAAGCTTAAACGTTTTAGCATAA

Upstream 100 bases:

>100_bases
GATATTGGGTAATTAAGAGATAGCGTTCGGAGAGGTAGTGCTCCCCAAATGAACCGAACCATCTGGCTTGCTTCTAAGAT
ATAGGAGTAAGACTAGATTT

Downstream 100 bases:

>100_bases
GGAAAATAGCAGAGATGATGGAAGTATCAAGATCCAATCTTATAGAGCAGCTTAAAGAGCATTTACCTCATCAGCCAGTC
TTTTATTCTAAAGCTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEME
KRIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPSLNVLA

Sequences:

>Translated_125_residues
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEME
KRIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPSLNVLA
>Mature_124_residues
TNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGALQGISSREELVPKSQVKEMEK
RIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPSLNVLA

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI145693180, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI145693177, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI145693154, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI145693126, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,
Organism=Escherichia coli, GI145693097, Length=112, Percent_Identity=43.75, Blast_Score=106, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14813; Mature: 14681

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQGISSREELVPKSQVKEMEKRIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPS
HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LNVLA
CCCCC
>Mature Secondary Structure 
TNCKLITSVERRRRWSLEEKKQIIEKTYQEGQSVSQIARRYDITPSQLFAWRRQMEQGA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LQGISSREELVPKSQVKEMEKRIRELERMLGKKTFENEILKEAVRLGQEKKLILRQPLPS
HHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
LNVLA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA