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The map label for this gene is insD1 [C]

Identifier: 46446634

GI number: 46446634

Start: 1191462

End: 1192274

Strand: Reverse

Name: insD1 [C]

Synonym: pc1000

Alternate gene names: 46446634

Gene position: 1192274-1191462 (Counterclockwise)

Preceding gene: 46446635

Following gene: 46446633

Centisome position: 49.38

GC content: 38.75

Gene sequence:

>813_bases
ATGATGGAAGTATCAAGATCCAATCTTATAGAGCAGCTTAAAGAGCATTTACCTCATCAGCCAGTCTTTTATTCTAAAGC
TGAAAATGAACAAGTTTTAGCTTTAATCAAAGAGGTGGTTAAAGGCAGGCCGACTTACGGTTATCGTAGGGTTCATGCGA
TTGTCAATAGCCTTCTCAAAGAGAAAAAACTTAAAGTCATTAATCATAAGCGATTTTTTAGACTGATGAGGCAGCATCAT
CTTTTGCTACAAAGGCCAAACAGGCGTCCTAAACGCTTACATACAGGTAAAGTAGAAACTCTCTACAGCAATACACGATG
GTGCTCAGACAGCTTCTCTATTCAATGCTTAAATGGTAATCGTGTTCATGTCGCCTTCTCGTTGGATACGTGTGACAGAA
AAGTCATGCGTTATATTGCCTCTACAATAGGTATTGATGGGCAGATGATTCGAGATTTGATGCTTGAGACTATTGAATAT
AGATTTGAACAGCCAAAAGCTAGAGTACCTCTTGAATGGCTCTCTGATAATGGCAGCTGTTACACGGCTAAAGAAACTGT
CAATTTTGGTAGAATGCTTGGTTTAACCACTAGAACCACACCATCTTATAGCCCAGAAAGTAATGGCATGGCAGAAGCTT
TTGTCAAAACTTTTAAAAGAGATTATGTTTATTTCGGCAATCTGGCAAGTGCTGAAGCTGTTTTGCAGCAATTGCCTATT
TGGATCGAAGACTATAACGCTAAAGCCCCTCATAAGGCTTTAAATATGCTCTCTCCAAGAGAGTATTTAAGAAAATTAAA
AATGACAGGCTAG

Upstream 100 bases:

>100_bases
AAATTTTAAAAGAGGCTGTAAGGCTTGGGCAGGAAAAAAAACTCATCTTGCGGCAGCCATTGCCAAGCTTAAACGTTTTA
GCATAAGGAAAATAGCAGAG

Downstream 100 bases:

>100_bases
CGGTCCGGTTTTATAGGGGCAACTCCACCCGTTTGTTTCCTGATTCTTTCATCTCGTGGACTTAAGGCATTTTCAGATCA
AAAACTAAGGAAATTATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKGRPTYGYRRVHAIVNSLLKEKKLKVINHKRFFRLMRQHH
LLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGNRVHVAFSLDTCDRKVMRYIASTIGIDGQMIRDLMLETIEY
RFEQPKARVPLEWLSDNGSCYTAKETVNFGRMLGLTTRTTPSYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI
WIEDYNAKAPHKALNMLSPREYLRKLKMTG

Sequences:

>Translated_270_residues
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKGRPTYGYRRVHAIVNSLLKEKKLKVINHKRFFRLMRQHH
LLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGNRVHVAFSLDTCDRKVMRYIASTIGIDGQMIRDLMLETIEY
RFEQPKARVPLEWLSDNGSCYTAKETVNFGRMLGLTTRTTPSYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI
WIEDYNAKAPHKALNMLSPREYLRKLKMTG
>Mature_270_residues
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKGRPTYGYRRVHAIVNSLLKEKKLKVINHKRFFRLMRQHH
LLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGNRVHVAFSLDTCDRKVMRYIASTIGIDGQMIRDLMLETIEY
RFEQPKARVPLEWLSDNGSCYTAKETVNFGRMLGLTTRTTPSYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI
WIEDYNAKAPHKALNMLSPREYLRKLKMTG

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1789424, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1789224, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1788305, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1787669, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1786558, Length=245, Percent_Identity=45.3061224489796, Blast_Score=217, Evalue=8e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 31483; Mature: 31483

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKGRPTYGYRRVHAIVNSLLK
CCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EKKLKVINHKRFFRLMRQHHLLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHCCCCCCCCCCEEEEECCC
RVHVAFSLDTCDRKVMRYIASTIGIDGQMIRDLMLETIEYRFEQPKARVPLEWLSDNGSC
EEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCE
YTAKETVNFGRMLGLTTRTTPSYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI
EEHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHCCC
WIEDYNAKAPHKALNMLSPREYLRKLKMTG
EEECCCCCCHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MMEVSRSNLIEQLKEHLPHQPVFYSKAENEQVLALIKEVVKGRPTYGYRRVHAIVNSLLK
CCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EKKLKVINHKRFFRLMRQHHLLLQRPNRRPKRLHTGKVETLYSNTRWCSDSFSIQCLNGN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHCCCCCCCCCCEEEEECCC
RVHVAFSLDTCDRKVMRYIASTIGIDGQMIRDLMLETIEYRFEQPKARVPLEWLSDNGSC
EEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCE
YTAKETVNFGRMLGLTTRTTPSYSPESNGMAEAFVKTFKRDYVYFGNLASAEAVLQQLPI
EEHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHCCC
WIEDYNAKAPHKALNMLSPREYLRKLKMTG
EEECCCCCCHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA