Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446367

Identifier: 46446367

GI number: 46446367

Start: 890973

End: 893798

Strand: Reverse

Name: 46446367

Synonym: pc0733

Alternate gene names: NA

Gene position: 893798-890973 (Counterclockwise)

Preceding gene: 46446368

Following gene: 46446363

Centisome position: 37.02

GC content: 33.01

Gene sequence:

>2826_bases
ATGCTGCTTCCCTCTAACATAGATTCTAATATTAATTCTAAGATTTTTGTAGATAGCGAACAAAATCCCTTATTTCCTTC
TCCCTTAGCTACAAAAATTGGGTTAAAAATATTCAAATATTTGGAATCGCTAGATCGAGAGCAAGCTAAGCTAGTGTGCA
GAAAATGGAAACAGCTGATCGATAAAATACATATTATTGAAAGGTATAATACAAAACTTATGAATGCGGCCGAGGTAAGA
CAGGAAGCTACTCATTATTTGCGAAACTCTAAAAAATTAAAAGCAGAGCAACGCTTTCTTTTAACAATTGTTAGGCTCTC
GAAAGATTGCATAAAAATAAAGGTCGCAGCTGCAAATGCCTTGATGATTTTAAAAAAAACCAATTTTTCTTTTGTTGGCT
CTGATTTTAGAGGGATTCAAGCCCCTGGTGTTAGGCTTGCTCGGACAATTTTGGATAAGGTTAATTTCTTGGGAGCAAAT
TTAGAAGAGGCGGACTTTACTGACTGCTCCTTGGAGGACGCTATTCTCGATGGTGCGGAACTTAAAGACGTCCAATTTGG
CCAGCTCCCTTATTTAAACCATCAAAGCAATGTACTCGCTATGGCTGTGTCTCCTAATGGCAACCTTTTGGCTTCCGTTG
ATCAAAATAATTTCTATGTCTGGAATCTGGAAACTTTCGAAGTTGAAAAGCAGCCCTTGGAAATAAAAAGTCCTCAAACT
TTTCCCCAGTTTCTTCCACTGGAAACAGAAAATACTCAGCAAACTTTTCTCCAGTTTTTTCAAAATGGTCAATTTTTCTT
TAAAGCATCTAGTAAGAAAGAAGGAAAGGCGCCCCAAAAAGCAAGAATTGAAATATGGAAAACCACACCCCTAGAAATGT
CCAATTCATTAGTTATTGATGATATTGACTCTTTTTCGTTATTGGCCCTTAGTCAAGATGGAAAAACGCTTATTACTGTA
ACCACAAAAAAAGTTAAAGGGTTTTATGGAGAATTGTATTTTGATAAAAAAACAGAAATTCGCCTTTGGCAAATAGACTT
TAATGACCAAAATCTTCCTCAAATTATCCCTGTCAAGACAAAAACAATAACAGGTTCAGCACAGGAGTGTAGCTATGCTC
CCAAGACCTCTATTATCGCTATTATTATCGCTTTTAATGCTTCTTTCCCTAACAGTCTTAAACTTTATACCCTTCCAAAC
TTAGAAATTAAACAGGAGTGGGCATTAAAATCATTAGAAGAAAAGAGAAAATTCCTAAACAGTATGATATTTACTCCTCA
AGAGAACCAGCTTATTATAAATATTGTTACCAAAACAGATAAAATTAAAAGCAAAGTATATTCTTGGAATATAAAAAATA
AGCAAAAAAAGAAACTATTTTCTGAAGAACATCCTATAAAAGACCCCCAATTTTTGCCAGACAGCTCACGAATAGCTTAC
TTTGTAGCCAAAGGACATGAAACTTTTTTTTGCATACGTAACAAAGATTTTAAATTAAATTTTAGTGAACGGTTTTCTAA
CTTCAGCTATAGGTATAGGATTATAGCTCAAAGTTTTATTTCCAATGGCCAATTTATCTTCCGACCTAAAATCAACCAAA
TTTCTATTACTCTTTTAAAAACTTTTGTAGGCAAAAAAGAACTTCCTCTATCTATTCGTGATATGTATTTTTCCCCGGAT
GAGCAAACAATCTTTTTATGGAATTATAATAGTGACGTTCGCGGTTCTCCAATAAACAATTTTTTTAGCAATACTGAAAA
TAAGCTCTATACCTATCAAACCCTTAATGGGAAAAGACTTGGGTATAAAAAATTACCAACATCCTTTTCTGAGTTAACAT
GGGGGCGGGGTTGTCAGCTTTCTTTTGATGCTCAATATTGTATTCGAAAGTATTTTCCTGAAAGCAATGGCAAAAACAAA
ATTACTATTTCTGAAGTTGAAAATGAAAAAGTACAGGCTTCATATGCAGGATCTTTTTTAGATTATTTTTTATCAAAAGA
TAATCGTTACATCGTCTTTATTTATCAAAACCAACTTAAATTAATTAAAATAGATTTTAAAAAACACGATCAATTAGTAA
ACGTCGATACCACAGAACAAAATCTTATTGTTTTATCTCTCTTTCTTTTGAGCAAAGAAAAAGTTGTATATACTTTTTCT
GATCCTTTATTTCCCATTACAACTCTTGCCTTAAGGAGTGTTGAAACAGGAAATATCAGCTTATGGGAGATTAATTGGGA
AACTCAACAATTACAAGGGTTGTTTCTGTGGTCCACGGAATTACCTTCTCCTAATTTTTGCGTGTTAGGTATACCGAAGT
TATGTTTTCAAAAATCAAAGTTCTATTTTCAAAAGAATAATCGAACTCTTGCTATATGGAATAAAGAGACATTTAGTGAG
GAAAACATCAAGTTGAAAAATGAGTTAATTGATTTTCTTGTATCCCAGGATGGCCTTTGGATGATGACTATTGAAAAACT
AGTAAGTTCAATGCATGATAGCGTCCTTTCCGAAGGTAAATCCAAGTTTCGCTTATGGAATTTAGAACAAATGAAAAAAC
TCGATCATTTCACTCTTCCTTTTGGTCGTTCAATGATCCGACTGTCAACACGCGGTAATTTTTTGATTGTTAATCACAGT
ACTAGTGATTTTGCAGAATTAAGTATACGAAAAGTAAAGAAAGGAAAATTTCATCTTTTGTGGAAAACTTCCCAATATTT
AAACGTAAAGGGATTAAGTTTAAAGAACACACAAAATTTAGATGCAAAAAATACCTTATTGCTTACTCAATTGCAAAATA
AGAAAGTTTTAGATGAAAATATTTAA

Upstream 100 bases:

>100_bases
AAAATTTAATTTTAAATAAAACTCTTATTTAGTCTAGTTTATATACCACGCAAACAGTTGAATAAATCCTTCCTCACCCT
CTTTTTAGGAGAATTATACG

Downstream 100 bases:

>100_bases
AATTATTTCTAAGAATATGCGAAAGCTTTTGAATTATTGTTTTTCTTAAAAACAAATCCCAATAAGAGACTTTCCATCCA
TTATGATTTTTAATTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 941; Mature: 941

Protein sequence:

>941_residues
MLLPSNIDSNINSKIFVDSEQNPLFPSPLATKIGLKIFKYLESLDREQAKLVCRKWKQLIDKIHIIERYNTKLMNAAEVR
QEATHYLRNSKKLKAEQRFLLTIVRLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARTILDKVNFLGAN
LEEADFTDCSLEDAILDGAELKDVQFGQLPYLNHQSNVLAMAVSPNGNLLASVDQNNFYVWNLETFEVEKQPLEIKSPQT
FPQFLPLETENTQQTFLQFFQNGQFFFKASSKKEGKAPQKARIEIWKTTPLEMSNSLVIDDIDSFSLLALSQDGKTLITV
TTKKVKGFYGELYFDKKTEIRLWQIDFNDQNLPQIIPVKTKTITGSAQECSYAPKTSIIAIIIAFNASFPNSLKLYTLPN
LEIKQEWALKSLEEKRKFLNSMIFTPQENQLIINIVTKTDKIKSKVYSWNIKNKQKKKLFSEEHPIKDPQFLPDSSRIAY
FVAKGHETFFCIRNKDFKLNFSERFSNFSYRYRIIAQSFISNGQFIFRPKINQISITLLKTFVGKKELPLSIRDMYFSPD
EQTIFLWNYNSDVRGSPINNFFSNTENKLYTYQTLNGKRLGYKKLPTSFSELTWGRGCQLSFDAQYCIRKYFPESNGKNK
ITISEVENEKVQASYAGSFLDYFLSKDNRYIVFIYQNQLKLIKIDFKKHDQLVNVDTTEQNLIVLSLFLLSKEKVVYTFS
DPLFPITTLALRSVETGNISLWEINWETQQLQGLFLWSTELPSPNFCVLGIPKLCFQKSKFYFQKNNRTLAIWNKETFSE
ENIKLKNELIDFLVSQDGLWMMTIEKLVSSMHDSVLSEGKSKFRLWNLEQMKKLDHFTLPFGRSMIRLSTRGNFLIVNHS
TSDFAELSIRKVKKGKFHLLWKTSQYLNVKGLSLKNTQNLDAKNTLLLTQLQNKKVLDENI

Sequences:

>Translated_941_residues
MLLPSNIDSNINSKIFVDSEQNPLFPSPLATKIGLKIFKYLESLDREQAKLVCRKWKQLIDKIHIIERYNTKLMNAAEVR
QEATHYLRNSKKLKAEQRFLLTIVRLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARTILDKVNFLGAN
LEEADFTDCSLEDAILDGAELKDVQFGQLPYLNHQSNVLAMAVSPNGNLLASVDQNNFYVWNLETFEVEKQPLEIKSPQT
FPQFLPLETENTQQTFLQFFQNGQFFFKASSKKEGKAPQKARIEIWKTTPLEMSNSLVIDDIDSFSLLALSQDGKTLITV
TTKKVKGFYGELYFDKKTEIRLWQIDFNDQNLPQIIPVKTKTITGSAQECSYAPKTSIIAIIIAFNASFPNSLKLYTLPN
LEIKQEWALKSLEEKRKFLNSMIFTPQENQLIINIVTKTDKIKSKVYSWNIKNKQKKKLFSEEHPIKDPQFLPDSSRIAY
FVAKGHETFFCIRNKDFKLNFSERFSNFSYRYRIIAQSFISNGQFIFRPKINQISITLLKTFVGKKELPLSIRDMYFSPD
EQTIFLWNYNSDVRGSPINNFFSNTENKLYTYQTLNGKRLGYKKLPTSFSELTWGRGCQLSFDAQYCIRKYFPESNGKNK
ITISEVENEKVQASYAGSFLDYFLSKDNRYIVFIYQNQLKLIKIDFKKHDQLVNVDTTEQNLIVLSLFLLSKEKVVYTFS
DPLFPITTLALRSVETGNISLWEINWETQQLQGLFLWSTELPSPNFCVLGIPKLCFQKSKFYFQKNNRTLAIWNKETFSE
ENIKLKNELIDFLVSQDGLWMMTIEKLVSSMHDSVLSEGKSKFRLWNLEQMKKLDHFTLPFGRSMIRLSTRGNFLIVNHS
TSDFAELSIRKVKKGKFHLLWKTSQYLNVKGLSLKNTQNLDAKNTLLLTQLQNKKVLDENI
>Mature_941_residues
MLLPSNIDSNINSKIFVDSEQNPLFPSPLATKIGLKIFKYLESLDREQAKLVCRKWKQLIDKIHIIERYNTKLMNAAEVR
QEATHYLRNSKKLKAEQRFLLTIVRLSKDCIKIKVAAANALMILKKTNFSFVGSDFRGIQAPGVRLARTILDKVNFLGAN
LEEADFTDCSLEDAILDGAELKDVQFGQLPYLNHQSNVLAMAVSPNGNLLASVDQNNFYVWNLETFEVEKQPLEIKSPQT
FPQFLPLETENTQQTFLQFFQNGQFFFKASSKKEGKAPQKARIEIWKTTPLEMSNSLVIDDIDSFSLLALSQDGKTLITV
TTKKVKGFYGELYFDKKTEIRLWQIDFNDQNLPQIIPVKTKTITGSAQECSYAPKTSIIAIIIAFNASFPNSLKLYTLPN
LEIKQEWALKSLEEKRKFLNSMIFTPQENQLIINIVTKTDKIKSKVYSWNIKNKQKKKLFSEEHPIKDPQFLPDSSRIAY
FVAKGHETFFCIRNKDFKLNFSERFSNFSYRYRIIAQSFISNGQFIFRPKINQISITLLKTFVGKKELPLSIRDMYFSPD
EQTIFLWNYNSDVRGSPINNFFSNTENKLYTYQTLNGKRLGYKKLPTSFSELTWGRGCQLSFDAQYCIRKYFPESNGKNK
ITISEVENEKVQASYAGSFLDYFLSKDNRYIVFIYQNQLKLIKIDFKKHDQLVNVDTTEQNLIVLSLFLLSKEKVVYTFS
DPLFPITTLALRSVETGNISLWEINWETQQLQGLFLWSTELPSPNFCVLGIPKLCFQKSKFYFQKNNRTLAIWNKETFSE
ENIKLKNELIDFLVSQDGLWMMTIEKLVSSMHDSVLSEGKSKFRLWNLEQMKKLDHFTLPFGRSMIRLSTRGNFLIVNHS
TSDFAELSIRKVKKGKFHLLWKTSQYLNVKGLSLKNTQNLDAKNTLLLTQLQNKKVLDENI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 109011; Mature: 109011

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPSNIDSNINSKIFVDSEQNPLFPSPLATKIGLKIFKYLESLDREQAKLVCRKWKQLI
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DKIHIIERYNTKLMNAAEVRQEATHYLRNSKKLKAEQRFLLTIVRLSKDCIKIKVAAANA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCE
LMILKKTNFSFVGSDFRGIQAPGVRLARTILDKVNFLGANLEEADFTDCSLEDAILDGAE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC
LKDVQFGQLPYLNHQSNVLAMAVSPNGNLLASVDQNNFYVWNLETFEVEKQPLEIKSPQT
CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCC
FPQFLPLETENTQQTFLQFFQNGQFFFKASSKKEGKAPQKARIEIWKTTPLEMSNSLVID
CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
DIDSFSLLALSQDGKTLITVTTKKVKGFYGELYFDKKTEIRLWQIDFNDQNLPQIIPVKT
CCCCEEEEEECCCCCEEEEEEEHHHCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEE
KTITGSAQECSYAPKTSIIAIIIAFNASFPNSLKLYTLPNLEIKQEWALKSLEEKRKFLN
EEECCCHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
SMIFTPQENQLIINIVTKTDKIKSKVYSWNIKNKQKKKLFSEEHPIKDPQFLPDSSRIAY
HHCCCCCCCCEEEEEEECCHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEE
FVAKGHETFFCIRNKDFKLNFSERFSNFSYRYRIIAQSFISNGQFIFRPKINQISITLLK
EEEECCCEEEEEECCCEEEEHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCCEEEHEEHH
TFVGKKELPLSIRDMYFSPDEQTIFLWNYNSDVRGSPINNFFSNTENKLYTYQTLNGKRL
HHHCCCCCCEEHEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEECCCCCC
GYKKLPTSFSELTWGRGCQLSFDAQYCIRKYFPESNGKNKITISEVENEKVQASYAGSFL
CHHHCCCCHHHCCCCCCCEEEECHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHH
DYFLSKDNRYIVFIYQNQLKLIKIDFKKHDQLVNVDTTEQNLIVLSLFLLSKEKVVYTFS
HHHHCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEC
DPLFPITTLALRSVETGNISLWEINWETQQLQGLFLWSTELPSPNFCVLGIPKLCFQKSK
CCCHHHHHHHHHEECCCCEEEEEECCCHHHCCEEEEEEECCCCCCEEEEECHHHHHCCCC
FYFQKNNRTLAIWNKETFSEENIKLKNELIDFLVSQDGLWMMTIEKLVSSMHDSVLSEGK
EEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC
SKFRLWNLEQMKKLDHFTLPFGRSMIRLSTRGNFLIVNHSTSDFAELSIRKVKKGKFHLL
CCEEEECHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
WKTSQYLNVKGLSLKNTQNLDAKNTLLLTQLQNKKVLDENI
EECCCEEEEECCEECCCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLLPSNIDSNINSKIFVDSEQNPLFPSPLATKIGLKIFKYLESLDREQAKLVCRKWKQLI
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DKIHIIERYNTKLMNAAEVRQEATHYLRNSKKLKAEQRFLLTIVRLSKDCIKIKVAAANA
HHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCE
LMILKKTNFSFVGSDFRGIQAPGVRLARTILDKVNFLGANLEEADFTDCSLEDAILDGAE
EEEEEECCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC
LKDVQFGQLPYLNHQSNVLAMAVSPNGNLLASVDQNNFYVWNLETFEVEKQPLEIKSPQT
CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCCC
FPQFLPLETENTQQTFLQFFQNGQFFFKASSKKEGKAPQKARIEIWKTTPLEMSNSLVID
CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
DIDSFSLLALSQDGKTLITVTTKKVKGFYGELYFDKKTEIRLWQIDFNDQNLPQIIPVKT
CCCCEEEEEECCCCCEEEEEEEHHHCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEEE
KTITGSAQECSYAPKTSIIAIIIAFNASFPNSLKLYTLPNLEIKQEWALKSLEEKRKFLN
EEECCCHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
SMIFTPQENQLIINIVTKTDKIKSKVYSWNIKNKQKKKLFSEEHPIKDPQFLPDSSRIAY
HHCCCCCCCCEEEEEEECCHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCEEE
FVAKGHETFFCIRNKDFKLNFSERFSNFSYRYRIIAQSFISNGQFIFRPKINQISITLLK
EEEECCCEEEEEECCCEEEEHHHHHCCCCEEEEEEEHHHHCCCEEEEECCCCEEEHEEHH
TFVGKKELPLSIRDMYFSPDEQTIFLWNYNSDVRGSPINNFFSNTENKLYTYQTLNGKRL
HHHCCCCCCEEHEEEEECCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEECCCCCC
GYKKLPTSFSELTWGRGCQLSFDAQYCIRKYFPESNGKNKITISEVENEKVQASYAGSFL
CHHHCCCCHHHCCCCCCCEEEECHHHHHHHHCCCCCCCCEEEEEECCCCEEEHHHHHHHH
DYFLSKDNRYIVFIYQNQLKLIKIDFKKHDQLVNVDTTEQNLIVLSLFLLSKEKVVYTFS
HHHHCCCCCEEEEEEECCEEEEEEEECCCCEEEECCCCCCCEEEEEEEEECCCEEEEEEC
DPLFPITTLALRSVETGNISLWEINWETQQLQGLFLWSTELPSPNFCVLGIPKLCFQKSK
CCCHHHHHHHHHEECCCCEEEEEECCCHHHCCEEEEEEECCCCCCEEEEECHHHHHCCCC
FYFQKNNRTLAIWNKETFSEENIKLKNELIDFLVSQDGLWMMTIEKLVSSMHDSVLSEGK
EEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCC
SKFRLWNLEQMKKLDHFTLPFGRSMIRLSTRGNFLIVNHSTSDFAELSIRKVKKGKFHLL
CCEEEECHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCEEEE
WKTSQYLNVKGLSLKNTQNLDAKNTLLLTQLQNKKVLDENI
EECCCEEEEECCEECCCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA