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The map label for this gene is ybeQ [H]

Identifier: 46446348

GI number: 46446348

Start: 867837

End: 869174

Strand: Reverse

Name: ybeQ [H]

Synonym: pc0714

Alternate gene names: 46446348

Gene position: 869174-867837 (Counterclockwise)

Preceding gene: 46446349

Following gene: 46446347

Centisome position: 36.0

GC content: 40.43

Gene sequence:

>1338_bases
ATGCAATTAAAATATATAGATGGCGATATTCCTAGCAGCTACTCTGCTCTTTCTTCCAGTCCAGATCTAAAATTAAGCCA
GAGTACAATAAACAATGGTAAAACATATATTCTTTTAGGAAGCTTTGAAAAAACATACCCTTTAAAGCGTAGAATTGGAA
TTGGAATATATGCAGCTTTTAAGACTTTATGTACGTTAGGCTTAGGGATTTTTTCTGAAAGTGTTCGAGAAGATTGGAAG
TCTTTTTGGAGCGGTAAAAAAAGTAAAATTATTTACTCTTCTTCTCCCTCATTTTTACCAACTAAACTTTTGGCAGACCA
AGGCGATGCAAAAGCTCAATACAAACTCGGATTGATGTATGATGAAAGCTGTGGTGTGACACAATCAGATGCAGAAGCTA
TTAAATATTTTAAACTCGCTGCCAAACAAGGTCATGCAGATGCTCAATATAACCTTGGGGTCAGGTATGCCAATGGGCGG
GGTGTGACACAATCAGATCAAGAAGCTATTAAATATTACAAACTCGCTGCCGAACAAGGCCATGCAGATGCTCAATATGC
TCTTGGATTTATGTATGCCAATAGGTGGGGTATTGCACAATCAGAGCAAGAAGCTATTAAATATTACAAACTCGCTGCCG
AACAAGGTCATGCAGATGCTCAATATGCTCTTGGATTTATATATGCCAATGGACTGGGTGTTACACAATCAGATGCAGAA
GCTTTTAAATATTTTAAACTCGCTGCCGAACAAGGCCATGCAAATGCTCAATACAACCTCGGAGTCAGATATTCCAATGG
ACGAGGTGTTACGCAATCAGATCAAGAAGCTTTTAAATATTACAAACTTGCTGCCGATCAAGGTCATGCAGATGCTCAAT
ATAATCTTGGAGTCAGGTATGTGAATGGGCAAGGCGTTATGCGATCAGAGCAAGAAGCCGCTAAATATTACAAACTCGCT
GCCGATCAAGGCTATGTAGATGCTCAATACAACCTTGGAGTCAGATATTCCAATGGACGAGGTGTTATGCAATCAGATCA
AGAGGCTATTAAATATTACAAACTTGCTGCCGATCAAGGTCATGCAAAGGCTCAATACAACCTTGGAGTCAGATATTCCA
ATGGACGAGGTGTTACGCAATCAGAGCAAGAGGCTACTAAATATTATAAACTTGCTGCCGATCAAGGTGATGCAAAGGCT
CAATACAACCTTGGAGCCAGGTATGCGAATGGGCGAGGCGTTACGCAATCAGAGCAAGAGGCTGCTAAATATTACAAACT
TGCTGCCGATCAAGGCCATGCAGATGCCCAATACGAGCTTGAAACTCTAACTCTGTAA

Upstream 100 bases:

>100_bases
AAATTAAATTGTAAATTACATAAAAATACATGATAATTATTAATAGATAAAAAAACGACGCATTATAAAATTTACTAGTA
AATTAAAAAAGGGAAACTCT

Downstream 100 bases:

>100_bases
AAAAGGGGCTAGGTGTTGTACAATCCAGTCAAGAAGCTTTGAGATATTATCAACTTGCTACTGATCAAGGGAATGTCCAG
GTAGCAGGAAAAATTGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQLKYIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLKRRIGIGIYAAFKTLCTLGLGIFSESVREDWK
SFWSGKKSKIIYSSSPSFLPTKLLADQGDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGR
GVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAE
AFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLA
ADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKA
QYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYELETLTL

Sequences:

>Translated_445_residues
MQLKYIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLKRRIGIGIYAAFKTLCTLGLGIFSESVREDWK
SFWSGKKSKIIYSSSPSFLPTKLLADQGDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGR
GVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAE
AFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLA
ADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKA
QYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYELETLTL
>Mature_445_residues
MQLKYIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLKRRIGIGIYAAFKTLCTLGLGIFSESVREDWK
SFWSGKKSKIIYSSSPSFLPTKLLADQGDAKAQYKLGLMYDESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGR
GVTQSDQEAIKYYKLAAEQGHADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAE
AFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRYVNGQGVMRSEQEAAKYYKLA
ADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQGHAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKA
QYNLGARYANGRGVTQSEQEAAKYYKLAADQGHADAQYELETLTL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=306, Percent_Identity=36.9281045751634, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI151301150, Length=343, Percent_Identity=33.8192419825073, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI217330658, Length=179, Percent_Identity=37.4301675977654, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI217330656, Length=179, Percent_Identity=37.4301675977654, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI33620759, Length=189, Percent_Identity=32.2751322751323, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87081769, Length=287, Percent_Identity=38.6759581881533, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1786867, Length=121, Percent_Identity=41.3223140495868, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=382, Percent_Identity=31.151832460733, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71988107, Length=334, Percent_Identity=27.5449101796407, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6319410, Length=287, Percent_Identity=29.9651567944251, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355295, Length=346, Percent_Identity=34.1040462427746, Blast_Score=150, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 49172; Mature: 49172

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKYIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLKRRIGIGIYAAF
CEEEEECCCCCCCHHHHCCCCCCEEEHHHCCCCCEEEEEECCCCCCCHHHHHCCHHHHHH
KTLCTLGLGIFSESVREDWKSFWSGKKSKIIYSSSPSFLPTKLLADQGDAKAQYKLGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEEEEEE
DESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQSDQEAIKYYKLAAEQG
ECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
HADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAE
CCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCHHH
AFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRY
HHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECEEEE
VNGQGVMRSEQEAAKYYKLAADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQG
ECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCC
HAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKAQYNLGARYANGRGVTQSEQE
CCEEEEEEEEEECCCCCCCCCHHHHHHHEEEECCCCCCCEEECCCCEECCCCCCCCCHHH
AAKYYKLAADQGHADAQYELETLTL
HHHHHHHHCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MQLKYIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLKRRIGIGIYAAF
CEEEEECCCCCCCHHHHCCCCCCEEEHHHCCCCCEEEEEECCCCCCCHHHHHCCHHHHHH
KTLCTLGLGIFSESVREDWKSFWSGKKSKIIYSSSPSFLPTKLLADQGDAKAQYKLGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEEEEEEE
DESCGVTQSDAEAIKYFKLAAKQGHADAQYNLGVRYANGRGVTQSDQEAIKYYKLAAEQG
ECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCC
HADAQYALGFMYANRWGIAQSEQEAIKYYKLAAEQGHADAQYALGFIYANGLGVTQSDAE
CCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCHHH
AFKYFKLAAEQGHANAQYNLGVRYSNGRGVTQSDQEAFKYYKLAADQGHADAQYNLGVRY
HHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECEEEE
VNGQGVMRSEQEAAKYYKLAADQGYVDAQYNLGVRYSNGRGVMQSDQEAIKYYKLAADQG
ECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCC
HAKAQYNLGVRYSNGRGVTQSEQEATKYYKLAADQGDAKAQYNLGARYANGRGVTQSEQE
CCEEEEEEEEEECCCCCCCCCHHHHHHHEEEECCCCCCCEEECCCCEECCCCCCCCCHHH
AAKYYKLAADQGHADAQYELETLTL
HHHHHHHHCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]