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The map label for this gene is ybeQ [H]

Identifier: 46446347

GI number: 46446347

Start: 866318

End: 867661

Strand: Reverse

Name: ybeQ [H]

Synonym: pc0713

Alternate gene names: 46446347

Gene position: 867661-866318 (Counterclockwise)

Preceding gene: 46446348

Following gene: 46446346

Centisome position: 35.94

GC content: 38.39

Gene sequence:

>1344_bases
ATGCGATCAAAATTTATAGATGGCGATATTCCTAGCAGCTACTCTGCTCTTTCTTCCAGTCCGGATCTAAAATTAAGCCA
AAGTACGATAAACAATGGTAAAACATATATCCTTTTAGGAAGCTTTGAAAAAACATACCCTTTAATGCGTAGAATTGGAA
TTGGAATATATGCAGCTTTTAAGACTTTATGTACGTTAGGCTTAGGGCTTTTTTCTGAAAGTGTTCGAGAAGATTGGAAG
TCTTTTTGGAGCGGTAAAAAAAGTAAAATTATTTACTCCTCTTCTCCCTCATTTTTACCAATTAAACTTTTGGCAGACCA
AGGCGATGCAAAAGCTCAATGCGAGCTTGGACTCATGTATAAAAATGGTCAAGTTGTCGCACAATCAGATGCAGAAGCTT
TTAAATATTTTAAACTTGCTGCTGATCAAGGTGATGTAAAGGCTCAATACAACCTTGGATGCATGTATATCAATGGGCGG
GGCGTTGTGCATTCAGAGCAAGAGGCTATTAAATATTTTAAATTCGCTGCTGATCAAGGCCATGCAGATGCTCAATTCAT
TATTGGAATTAGATATAAAAAGGGTCGAGGTGTCTCCCAATCGAATCAAGAAGCTACTAAATATTTTCAGCTTGCTGCCA
AACAAGGCCATGCAGAAGCGCAGCTTGAGCTCAAGCTCATTATAGAAAGCCATGATATTGCACAAACGAATCAAGAAACT
TTTAAATATTTTAAACTCGCTGCCGATCAAGGCGATGTAAATGCTCAATCCAAACTTGGAACTATGTATAAAAAGGGGTT
AGGAGTTGAGCAATCCAATCAAGAAGCTATTAAATATTTTAAACTCGCTGCCGATCAAGGCGATGTAAATGCTCAATATA
ATCTTGCATTCATGTATGCAAAAGGAAAACGGGTTCCACAATCTCACCAAGAAGCTATTAAATATTTTGAACTCATAGCT
GACCAAGGTGAGGCAATTGCTCAATGTGCTCTTGGATTTATGTATTTCCAGGGAAAAGGTATTACACAATCCCATCAAGA
AGCCGCTAAATACTTTAAATTTGCAGCCGATCAAGGTGAGGCAGATGCTCAATGTGCTCTTGGGTTTATGTATGCCAATG
GACTAGGCGTCACACAATCTGATCAAGAAGCTGCTAAATATTACAAACTCGCTGCCGATCAAGGCCATGCAGATGCTCAA
TACGAGCTTGGGACTATGTATAAAAAGGGGCTAGGAGTTGAACAATCCAGTCAAGAAGCTCTGAGATATTATCAACTTGC
TGCTGAACAAGGGAATACTCAGGCAGCAATAAAAATTGACTCTATTATTTCTCAAAAAAACTAA

Upstream 100 bases:

>100_bases
TCCAGGTAGCAGGAAAAATTGACTCTATTATTTCTCAACAAAATAGCTAAACTATTATAAAATTATTATTTATTTTTTAA
TGAATTAAAAAAGGAATTAT

Downstream 100 bases:

>100_bases
CTAAATTAGTTTAAAATCAAAATTTATATTTTAATAAATTAAAAAGGAAGTCATATACGATTAAAATTCATAGCCGACTT
TCCTCATAAATAATCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MRSKFIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLMRRIGIGIYAAFKTLCTLGLGLFSESVREDWK
SFWSGKKSKIIYSSSPSFLPIKLLADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGR
GVVHSEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQET
FKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQSHQEAIKYFELIA
DQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQ
YELGTMYKKGLGVEQSSQEALRYYQLAAEQGNTQAAIKIDSIISQKN

Sequences:

>Translated_447_residues
MRSKFIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLMRRIGIGIYAAFKTLCTLGLGLFSESVREDWK
SFWSGKKSKIIYSSSPSFLPIKLLADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGR
GVVHSEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQET
FKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQSHQEAIKYFELIA
DQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQ
YELGTMYKKGLGVEQSSQEALRYYQLAAEQGNTQAAIKIDSIISQKN
>Mature_447_residues
MRSKFIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLMRRIGIGIYAAFKTLCTLGLGLFSESVREDWK
SFWSGKKSKIIYSSSPSFLPIKLLADQGDAKAQCELGLMYKNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGR
GVVHSEQEAIKYFKFAADQGHADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQET
FKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYAKGKRVPQSHQEAIKYFELIA
DQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGEADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQ
YELGTMYKKGLGVEQSSQEALRYYQLAAEQGNTQAAIKIDSIISQKN

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=322, Percent_Identity=35.0931677018634, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI151301150, Length=341, Percent_Identity=33.4310850439883, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI217330658, Length=171, Percent_Identity=35.0877192982456, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI217330656, Length=171, Percent_Identity=35.0877192982456, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI33620759, Length=263, Percent_Identity=26.2357414448669, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI87081769, Length=301, Percent_Identity=32.890365448505, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1786867, Length=136, Percent_Identity=34.5588235294118, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17563256, Length=348, Percent_Identity=31.6091954022989, Blast_Score=139, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6319410, Length=288, Percent_Identity=26.3888888888889, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355295, Length=347, Percent_Identity=32.5648414985591, Blast_Score=156, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 49357; Mature: 49357

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKFIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLMRRIGIGIYAAF
CCCCCCCCCCCCCHHHHCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
KTLCTLGLGLFSESVREDWKSFWSGKKSKIIYSSSPSFLPIKLLADQGDAKAQCELGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEE
KNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVHSEQEAIKYFKFAADQG
ECCEEEECCCHHHHHHHEEECCCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHHCCCC
HADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQET
CCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHH
FKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYA
HHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCEEEEEEEEE
KGKRVPQSHQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGE
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCC
ADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQYELGTMYKKGLGVEQSSQEA
CCHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
LRYYQLAAEQGNTQAAIKIDSIISQKN
HHHHHHHHHCCCCEEEEEEHHHHCCCC
>Mature Secondary Structure
MRSKFIDGDIPSSYSALSSSPDLKLSQSTINNGKTYILLGSFEKTYPLMRRIGIGIYAAF
CCCCCCCCCCCCCHHHHCCCCCCEEEHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
KTLCTLGLGLFSESVREDWKSFWSGKKSKIIYSSSPSFLPIKLLADQGDAKAQCELGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEEE
KNGQVVAQSDAEAFKYFKLAADQGDVKAQYNLGCMYINGRGVVHSEQEAIKYFKFAADQG
ECCEEEECCCHHHHHHHEEECCCCCCEEEEEEEEEEECCCCCEECHHHHHHHHHHHCCCC
HADAQFIIGIRYKKGRGVSQSNQEATKYFQLAAKQGHAEAQLELKLIIESHDIAQTNQET
CCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHH
FKYFKLAADQGDVNAQSKLGTMYKKGLGVEQSNQEAIKYFKLAADQGDVNAQYNLAFMYA
HHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCEEEEEEEEE
KGKRVPQSHQEAIKYFELIADQGEAIAQCALGFMYFQGKGITQSHQEAAKYFKFAADQGE
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCC
ADAQCALGFMYANGLGVTQSDQEAAKYYKLAADQGHADAQYELGTMYKKGLGVEQSSQEA
CCHHHEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHH
LRYYQLAAEQGNTQAAIKIDSIISQKN
HHHHHHHHHCCCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]