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The map label for this gene is ybeQ [H]

Identifier: 46446344

GI number: 46446344

Start: 862606

End: 863745

Strand: Reverse

Name: ybeQ [H]

Synonym: pc0710

Alternate gene names: 46446344

Gene position: 863745-862606 (Counterclockwise)

Preceding gene: 46446345

Following gene: 46446343

Centisome position: 35.77

GC content: 37.28

Gene sequence:

>1140_bases
TTGTTAGTAAAATACATAAACGACAACGCTATTTCCAATAAATATTTTAATGCTACTTCCTGTTTGAATCTAGAATTCGA
ACAAAGTAAGATGTACAAAGGTAGAACATATCTACTCTTGGGAAATTTTGAAAAAACATATTCTTTAATAAGTAGATTTG
AAATTGGAATAAGGGTAATTTTTAAAACTTTATTTTCTGTAGGATTTGGGCTTTTTTTTGAATCAGTTAGAGAAGATTGG
AAATCTTTTTGGAATGGTAGAAAAAAACAAGTTATTTACAGCTCCTCCCCTTTTTTAGCTACAAAAATTTTAGTAAAGCA
AGGAAATGCAACTACTCAATACAAGCTTGGAGTTATGTATTTAGAAGGAAAAGGTACTATCCAGTCTCATCAAAAAGCTG
CGAAATATTTTCAACTCGCCGCCAATCAAAATCATGCAGCTGCTCAGAATAATCTTGGACTCCTGTATGCAAATGGATGG
GGCATTGCCCAGTCTGATCAAGAAGCTGTAAAATATTACCAACTTGCTGCTAAACAAGGAAACGCTTCTGCTCAATGCAG
ACTCGGAGATTTATATGTACATGGACGAGGTGTTTCACAATCTTACCAAAAAAGTTTTGAATATTACCAACTTGCTGCTA
AACAAGGAAACGCTTCTGCTCAATGCAAACTCGGAGCAATGTATGCAGAGGGCCTAGGTGTCCCACAATCTGATCAAGAA
GCTGTGGAATATTTTCAACTCGCTGCCAATCAAAATCATGCAGCTGCTCAGTATTGCTTAGGAGTTTTTTATGCACATGG
ACGAGGTGTTACACAATCTGATCAAAAAGCTTTAGAATATTGCCAACTCGCTGCTAATCAAGGTATTGCAACCGCTCAGT
ATAGCCTTGGACTCATGTATGCACATGGCCACTGTGTCCCACAATCTGATCAAGAAGCTGTAAAATATTACCAACTCGCT
GCTAATCAAAATCATACAATCGCTCAACGCAACCTCGGATTGATGTATAAAAATGGCCAAGGTGTCGCACAATCGGATCA
AGAAGCGGTTAAATACTTTCAACTCGCTGCCAACCAAGGTGATTTAACTGCCCAGCATAATCTTGAGGTTATGAATGAAA
ATGGCCAAAACATTACATAA

Upstream 100 bases:

>100_bases
GAGAATAAACGTACATAAATATATCTGAATTTAAATATAAAATTTGATAAATAATAAATTATTAAATAGTAAAATTTAAT
AAATTAAAAAAGAGATTTAA

Downstream 100 bases:

>100_bases
TAAAATTTTATTTCCTTTAGAAATTTGGCTTTTTCTGAAGATGTTAGAGAGTAGATTGAGAGAAAATCTTTTTGAAACAG
TAAGAAAATAAAATTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLVKYINDNAISNKYFNATSCLNLEFEQSKMYKGRTYLLLGNFEKTYSLISRFEIGIRVIFKTLFSVGFGLFFESVREDW
KSFWNGRKKQVIYSSSPFLATKILVKQGNATTQYKLGVMYLEGKGTIQSHQKAAKYFQLAANQNHAAAQNNLGLLYANGW
GIAQSDQEAVKYYQLAAKQGNASAQCRLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEGLGVPQSDQE
AVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMYAHGHCVPQSDQEAVKYYQLA
ANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQGDLTAQHNLEVMNENGQNIT

Sequences:

>Translated_379_residues
MLVKYINDNAISNKYFNATSCLNLEFEQSKMYKGRTYLLLGNFEKTYSLISRFEIGIRVIFKTLFSVGFGLFFESVREDW
KSFWNGRKKQVIYSSSPFLATKILVKQGNATTQYKLGVMYLEGKGTIQSHQKAAKYFQLAANQNHAAAQNNLGLLYANGW
GIAQSDQEAVKYYQLAAKQGNASAQCRLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEGLGVPQSDQE
AVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMYAHGHCVPQSDQEAVKYYQLA
ANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQGDLTAQHNLEVMNENGQNIT
>Mature_379_residues
MLVKYINDNAISNKYFNATSCLNLEFEQSKMYKGRTYLLLGNFEKTYSLISRFEIGIRVIFKTLFSVGFGLFFESVREDW
KSFWNGRKKQVIYSSSPFLATKILVKQGNATTQYKLGVMYLEGKGTIQSHQKAAKYFQLAANQNHAAAQNNLGLLYANGW
GIAQSDQEAVKYYQLAAKQGNASAQCRLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEGLGVPQSDQE
AVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMYAHGHCVPQSDQEAVKYYQLA
ANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQGDLTAQHNLEVMNENGQNIT

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=288, Percent_Identity=34.7222222222222, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI151301150, Length=291, Percent_Identity=31.6151202749141, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI217330658, Length=177, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI217330656, Length=177, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI33620759, Length=178, Percent_Identity=30.8988764044944, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081769, Length=263, Percent_Identity=33.8403041825095, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1786867, Length=130, Percent_Identity=35.3846153846154, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=296, Percent_Identity=31.7567567567568, Blast_Score=110, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6319410, Length=219, Percent_Identity=28.7671232876712, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21355295, Length=287, Percent_Identity=32.7526132404181, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 42175; Mature: 42175

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKYINDNAISNKYFNATSCLNLEFEQSKMYKGRTYLLLGNFEKTYSLISRFEIGIRVI
CEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
FKTLFSVGFGLFFESVREDWKSFWNGRKKQVIYSSSPFLATKILVKQGNATTQYKLGVMY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEEE
LEGKGTIQSHQKAAKYFQLAANQNHAAAQNNLGLLYANGWGIAQSDQEAVKYYQLAAKQG
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
NASAQCRLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEGLGVPQSDQE
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCCHHH
AVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMY
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEHEEEEEE
AHGHCVPQSDQEAVKYYQLAANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQG
ECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
DLTAQHNLEVMNENGQNIT
CCEECCCEEEECCCCCCCC
>Mature Secondary Structure
MLVKYINDNAISNKYFNATSCLNLEFEQSKMYKGRTYLLLGNFEKTYSLISRFEIGIRVI
CEEEEECCCCCCCCCCCCEEEEEEEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
FKTLFSVGFGLFFESVREDWKSFWNGRKKQVIYSSSPFLATKILVKQGNATTQYKLGVMY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEEE
LEGKGTIQSHQKAAKYFQLAANQNHAAAQNNLGLLYANGWGIAQSDQEAVKYYQLAAKQG
EECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
NASAQCRLGDLYVHGRGVSQSYQKSFEYYQLAAKQGNASAQCKLGAMYAEGLGVPQSDQE
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCCHHH
AVEYFQLAANQNHAAAQYCLGVFYAHGRGVTQSDQKALEYCQLAANQGIATAQYSLGLMY
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEHEEEEEE
AHGHCVPQSDQEAVKYYQLAANQNHTIAQRNLGLMYKNGQGVAQSDQEAVKYFQLAANQG
ECCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC
DLTAQHNLEVMNENGQNIT
CCEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]