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The map label for this gene is ybeQ [H]

Identifier: 46446345

GI number: 46446345

Start: 864174

End: 865412

Strand: Reverse

Name: ybeQ [H]

Synonym: pc0711

Alternate gene names: 46446345

Gene position: 865412-864174 (Counterclockwise)

Preceding gene: 46446346

Following gene: 46446344

Centisome position: 35.84

GC content: 38.58

Gene sequence:

>1239_bases
ATGCAATTAAAATTTATAGATGGCAACGCTCCTAGCAACTACTCTGCCCTTTCTTCTAGCATGGATTCAAAATTAAGCCA
AAATAAAATAATCAATGGTAAAGCGTACATACTTTTAGGAAGCTTTGAAAAAACATATCCACTAGTGCGTAGAATTTGGA
TTGGAATCCGTGCATTTTGCAATTCTCTATTTTCTTTAAAAGTCGGGCTTTTTTCTGAAAGTGTTCGAGAAGATTGGAAG
TCTTTTTGGAACGGTAAAAAATGTAAAATTATTTACTCTTCTTCTCCCCCATTTTTACCAACTAAAAATTTGGCAGACCA
AGGCGATACAAAAGCTCAATACAAACTCGGATTGATGTATGATGAAGGCTGTGGTGTGACACAATCAAAGCAAGAGACTT
TTAAATATTTTAAACTCGCTGCCGATCAAGGCCATGTAATGGCTGAATATAGCCTCGGAGCCATGTATGATGAAGGCTGT
GGTGTGACACAATCAAAGCAAGAGGCTTTTAAATATTTTAAATTCGCTGCTGATCAAGGCGACGCAACGGCTCAATATAA
ACTTGGAGCCATGTATGATGAAGGCAGCGGTGTGACACGCTCAGAGCAAGAGGCTTTTAAATATTTTAAACTCGCTGCCG
ATCAAGGCCATGCAACGGCCCAATATAAACTTGGAATCATATATGGCTATGGAAGGTGTGTTACAAATTCAGAGCAAGAA
GCTTTTAAATATTACAAACTCGCTGCCGATCAAGGCCATGTAATGGCTCAATATAGCCTTGGATTAACGTATGCTTATGG
ATGGGGCGTTAAGCAATCAAAGCAAGAGGCTTTTAAATATTTTAAACTCGCTGCTGATCAAGGCCATGCAAAGGCTCAAT
ATCAGCTCGGAGACACGTATAAAAATGGGCGAGGTGTTAAGCGATCAAAGCAAGAGGCTATTAAATATTACAAACTTGCT
GCCGATCAAGGTTATGCAGATGCTCAATATTATCTTGGAATCATATATGATAAAAAACGAGATGCTATACAATCAAAACA
AGAGGCTTTTAAATATTTTAAACTCGCTGCTGATCAAGGCCATGCAGATGCTCAATACTTTGTCGGAATGATGTACCAAA
AAGGAAGAGGTGTCTCTCCATCAGAAGAAGGGGCTATTAAATATTACAAACTTGCTGCCAAACAAGGCGATACAATGGCA
GCAAGTAAAATTAACTCTATAATCTCTCGACAGAACTAG

Upstream 100 bases:

>100_bases
GTAAATATTTGAATTTTATTGTAAATATTTTCCCAATTAAATTTGAAAATATTATAAAGTTAATTAAATATTATTAATAA
ACTAAAAAAAAGAGAATTTT

Downstream 100 bases:

>100_bases
CTAAATTGAGGTAAGATCATCATTTATATTTTAGTAAATTAAAAAAAAGTATAGCAATAAAAATTCATAGGCGACTTTCC
CTAAATAATCTGTTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MQLKFIDGNAPSNYSALSSSMDSKLSQNKIINGKAYILLGSFEKTYPLVRRIWIGIRAFCNSLFSLKVGLFSESVREDWK
SFWNGKKCKIIYSSSPPFLPTKNLADQGDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGC
GVTQSKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQE
AFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTYKNGRGVKRSKQEAIKYYKLA
ADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQGHADAQYFVGMMYQKGRGVSPSEEGAIKYYKLAAKQGDTMA
ASKINSIISRQN

Sequences:

>Translated_412_residues
MQLKFIDGNAPSNYSALSSSMDSKLSQNKIINGKAYILLGSFEKTYPLVRRIWIGIRAFCNSLFSLKVGLFSESVREDWK
SFWNGKKCKIIYSSSPPFLPTKNLADQGDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGC
GVTQSKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQE
AFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTYKNGRGVKRSKQEAIKYYKLA
ADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQGHADAQYFVGMMYQKGRGVSPSEEGAIKYYKLAAKQGDTMA
ASKINSIISRQN
>Mature_412_residues
MQLKFIDGNAPSNYSALSSSMDSKLSQNKIINGKAYILLGSFEKTYPLVRRIWIGIRAFCNSLFSLKVGLFSESVREDWK
SFWNGKKCKIIYSSSPPFLPTKNLADQGDTKAQYKLGLMYDEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGC
GVTQSKQEAFKYFKFAADQGDATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQE
AFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTYKNGRGVKRSKQEAIKYYKLA
ADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQGHADAQYFVGMMYQKGRGVSPSEEGAIKYYKLAAKQGDTMA
ASKINSIISRQN

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=307, Percent_Identity=32.8990228013029, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI151301150, Length=301, Percent_Identity=31.5614617940199, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI217330658, Length=171, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI217330656, Length=171, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI33620759, Length=317, Percent_Identity=27.7602523659306, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI87081769, Length=301, Percent_Identity=33.8870431893688, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786867, Length=125, Percent_Identity=39.2, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=336, Percent_Identity=29.1666666666667, Blast_Score=120, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6319410, Length=292, Percent_Identity=29.1095890410959, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21355295, Length=302, Percent_Identity=38.0794701986755, Blast_Score=160, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 46228; Mature: 46228

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKFIDGNAPSNYSALSSSMDSKLSQNKIINGKAYILLGSFEKTYPLVRRIWIGIRAFC
CEEEEECCCCCCCHHHHHHHHHHHHHHCEEECCEEEEEEECCHHHHHHHHHHHHHHHHHH
NSLFSLKVGLFSESVREDWKSFWNGKKCKIIYSSSPPFLPTKNLADQGDTKAQYKLGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE
DEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQEAFKYFKFAADQG
ECCCCCCCCHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCC
DATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQE
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEECCCHHH
AFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTY
HHHHHHEECCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCC
HADAQYFVGMMYQKGRGVSPSEEGAIKYYKLAAKQGDTMAASKINSIISRQN
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLKFIDGNAPSNYSALSSSMDSKLSQNKIINGKAYILLGSFEKTYPLVRRIWIGIRAFC
CEEEEECCCCCCCHHHHHHHHHHHHHHCEEECCEEEEEEECCHHHHHHHHHHHHHHHHHH
NSLFSLKVGLFSESVREDWKSFWNGKKCKIIYSSSPPFLPTKNLADQGDTKAQYKLGLMY
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE
DEGCGVTQSKQETFKYFKLAADQGHVMAEYSLGAMYDEGCGVTQSKQEAFKYFKFAADQG
ECCCCCCCCHHHHHHHHHEECCCCCEEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCC
DATAQYKLGAMYDEGSGVTRSEQEAFKYFKLAADQGHATAQYKLGIIYGYGRCVTNSEQE
CCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCEEECCCHHH
AFKYYKLAADQGHVMAQYSLGLTYAYGWGVKQSKQEAFKYFKLAADQGHAKAQYQLGDTY
HHHHHHEECCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KNGRGVKRSKQEAIKYYKLAADQGYADAQYYLGIIYDKKRDAIQSKQEAFKYFKLAADQG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCC
HADAQYFVGMMYQKGRGVSPSEEGAIKYYKLAAKQGDTMAASKINSIISRQN
CCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]