Click here to switch to the map view.

The map label for this gene is ybeQ [H]

Identifier: 46446343

GI number: 46446343

Start: 860930

End: 861859

Strand: Reverse

Name: ybeQ [H]

Synonym: pc0709

Alternate gene names: 46446343

Gene position: 861859-860930 (Counterclockwise)

Preceding gene: 46446344

Following gene: 46446342

Centisome position: 35.7

GC content: 39.14

Gene sequence:

>930_bases
ATGACAGTAAAATACATAGATAGCAATGTTCTCCCCAATAAATATGCTAATTTCTCCCCCTGCTTGAATTCAGAATTAAA
TCAAAGCAAAGTTTACAATGGTAAAACTTATACCCTTTTAGGAAGCTTTGAAAAAACATATCCTTTAATACGTAGGATTG
AAATTGGAATACGTGCAGTTTTCAAAACTCTATTTTCTTTAGGATTCGGACTTCTTTTTGAAAGTGTTAGAGAGGATTGG
AAGACTTTTTGGAATGGTAAGAAAAGAAAAATCATTTATACTTTTTCCTCTTTTTTACCGGTTAAACTTTTGGCAGACCA
AGGCGATGCTAAATCTCAATACCTCTTTGGATTAAGGTATATAAACGGCCAAGGTGTCGCACAATCAGATCAAGAAGCTT
TTAAATATTTTCAACTTGCTGCCAATCAAAATTATGCAGATGCTCAATACAGCCTTGGTTGTATGTATGAAAACGGCCAA
GGTGTCGCACAATCGGATCAAAATGCTGCGCAATGTTATCAGCTCGCCGCTAATCAAAATCATGTAAAAGCTCAATATAA
CCTGGGTGTCATGTATATGCATGGCCAAGGTGTCGCGCAATCGGATCAAGAAGCCGCTCGATATTATCAACTCGCTGCTA
AACAAGGCCATGCAAAAGCTCAATTCAGCCTTGGATTCATATATGCACATGGAAAAGGTGTTGAGCAATCGGATCAAAAA
GCTGTGAAATATTATCAACGCGCTGCTAAACAAGGAAACGCCTCTGCACAATGCAATCTCGGAGTTATGTATTCAAGCGG
TCGTGGTGTCCCACAATCGGATCAAGAAGCCGCTCGATATTATCAACTCGCTGCCGATCAGGGTGATCTAATTGCTCAAA
GGAACCTCAGAACTATGCGTGAAAATGGACGCCTTAATAATATAGCGTAG

Upstream 100 bases:

>100_bases
TTTAAAGCTCACGTTATAAAAACAAATACAGCATCGCCCAACTCGCTAAAATAATCATTAATTAATCCTATAAATTATTA
ATAAATTTAAAAGGACTAAC

Downstream 100 bases:

>100_bases
GAAAAGTTAGCTATAAATAATATCAATTTACTGCTTACTGCTTACTGCTTACTGCTTACTGCTTACTGCTTACTGCTAAT
TGCTGAGAAGATCAACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTVKYIDSNVLPNKYANFSPCLNSELNQSKVYNGKTYTLLGSFEKTYPLIRRIEIGIRAVFKTLFSLGFGLLFESVREDW
KTFWNGKKRKIIYTFSSFLPVKLLADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQ
GVAQSDQNAAQCYQLAANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQK
AVKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQRNLRTMRENGRLNNIA

Sequences:

>Translated_309_residues
MTVKYIDSNVLPNKYANFSPCLNSELNQSKVYNGKTYTLLGSFEKTYPLIRRIEIGIRAVFKTLFSLGFGLLFESVREDW
KTFWNGKKRKIIYTFSSFLPVKLLADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQ
GVAQSDQNAAQCYQLAANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQK
AVKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQRNLRTMRENGRLNNIA
>Mature_308_residues
TVKYIDSNVLPNKYANFSPCLNSELNQSKVYNGKTYTLLGSFEKTYPLIRRIEIGIRAVFKTLFSLGFGLLFESVREDWK
TFWNGKKRKIIYTFSSFLPVKLLADQGDAKSQYLFGLRYINGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQG
VAQSDQNAAQCYQLAANQNHVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQKA
VKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQRNLRTMRENGRLNNIA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=189, Percent_Identity=35.978835978836, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI151301150, Length=189, Percent_Identity=34.9206349206349, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI217330658, Length=169, Percent_Identity=36.094674556213, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI217330656, Length=169, Percent_Identity=36.094674556213, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI33620759, Length=230, Percent_Identity=30.8695652173913, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87081769, Length=242, Percent_Identity=33.8842975206612, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786867, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17563256, Length=193, Percent_Identity=34.7150259067358, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6319410, Length=211, Percent_Identity=28.9099526066351, Blast_Score=62, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355295, Length=189, Percent_Identity=35.978835978836, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 34681; Mature: 34550

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKYIDSNVLPNKYANFSPCLNSELNQSKVYNGKTYTLLGSFEKTYPLIRRIEIGIRAV
CEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
FKTLFSLGFGLLFESVREDWKTFWNGKKRKIIYTFSSFLPVKLLADQGDAKSQYLFGLRY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEE
INGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQGVAQSDQNAAQCYQLAANQN
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
HVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQK
CEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHH
AVKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQRNLRTMR
HHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
ENGRLNNIA
HCCCCCCCC
>Mature Secondary Structure 
TVKYIDSNVLPNKYANFSPCLNSELNQSKVYNGKTYTLLGSFEKTYPLIRRIEIGIRAV
EEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
FKTLFSLGFGLLFESVREDWKTFWNGKKRKIIYTFSSFLPVKLLADQGDAKSQYLFGLRY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEE
INGQGVAQSDQEAFKYFQLAANQNYADAQYSLGCMYENGQGVAQSDQNAAQCYQLAANQN
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
HVKAQYNLGVMYMHGQGVAQSDQEAARYYQLAAKQGHAKAQFSLGFIYAHGKGVEQSDQK
CEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHH
AVKYYQRAAKQGNASAQCNLGVMYSSGRGVPQSDQEAARYYQLAADQGDLIAQRNLRTMR
HHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
ENGRLNNIA
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]