| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is yhgN [C]
Identifier: 46446317
GI number: 46446317
Start: 831348
End: 831947
Strand: Reverse
Name: yhgN [C]
Synonym: pc0683
Alternate gene names: 46446317
Gene position: 831947-831348 (Counterclockwise)
Preceding gene: 46446318
Following gene: 46446316
Centisome position: 34.46
GC content: 35.67
Gene sequence:
>600_bases ATGAATATCTTTAACATTGCACTTGTTCTTTTTTTTATCATGGACCCTATTGGGAATATTTCTTCTTATCAAACCATGGT CAAAGAGCTCGATCGTAGACATCAATCTAAAATTATTTTTAGAGAAATGCTCATAGCTCTTGTCGCAATGATTTTTTTTA ATTATATAGGAGAGTTTATTTTTGATTTTCTCGATTTATCAGAAACAACCGTGCGTCTTTCTTCAGGGATTATTTTATTT CTGATTGCTATCAAGATTCTTTTTACTGCAAATGATAGCCCACGAGCCAACCTTCCTCAAGGGGAGCCATTCATTTTTCC TTTAGCCATTCCACTGATTGCTGGGCCTGGTTTAATGGCAACCATTATGTTATATGCTCATCTTGAACCTTACCAATCCA TTATGCTAGCATCAATCTTGATCGCTTGGACTTTGTCTGTAATCATCCTGTATTTTTCAAAGAAAATCAAATCTTTCTTA GGGGAAAGTGGATTGATGGCCAGTGAGAGAATGATTGGAATGGTGCTCGTTTTGATTGCAGTTCAAAGATTTTTAGAAGG CATTTTACTTTTTTGGACTACACAACCCAATCCGACTTGA
Upstream 100 bases:
>100_bases GCCATGATCGCCATTCAAATGATCGTTCAAGGATCTGGTTTGTTTTTAACTCTTCTATTCGCTGTTTAAACTTTGAGAAG CCCTTTCCAGGAGTATGAGA
Downstream 100 bases:
>100_bases GTCTCTCTAAAAGTATGCAAAATATTAAATTGAAGATTGCTTATGATGGACAGGCGTATTTTGGCTGGCAAAAAACTCCT GCCGGCCCAAGCGTTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNIFNIALVLFFIMDPIGNISSYQTMVKELDRRHQSKIIFREMLIALVAMIFFNYIGEFIFDFLDLSETTVRLSSGIILF LIAIKILFTANDSPRANLPQGEPFIFPLAIPLIAGPGLMATIMLYAHLEPYQSIMLASILIAWTLSVIILYFSKKIKSFL GESGLMASERMIGMVLVLIAVQRFLEGILLFWTTQPNPT
Sequences:
>Translated_199_residues MNIFNIALVLFFIMDPIGNISSYQTMVKELDRRHQSKIIFREMLIALVAMIFFNYIGEFIFDFLDLSETTVRLSSGIILF LIAIKILFTANDSPRANLPQGEPFIFPLAIPLIAGPGLMATIMLYAHLEPYQSIMLASILIAWTLSVIILYFSKKIKSFL GESGLMASERMIGMVLVLIAVQRFLEGILLFWTTQPNPT >Mature_199_residues MNIFNIALVLFFIMDPIGNISSYQTMVKELDRRHQSKIIFREMLIALVAMIFFNYIGEFIFDFLDLSETTVRLSSGIILF LIAIKILFTANDSPRANLPQGEPFIFPLAIPLIAGPGLMATIMLYAHLEPYQSIMLASILIAWTLSVIILYFSKKIKSFL GESGLMASERMIGMVLVLIAVQRFLEGILLFWTTQPNPT
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=189, Percent_Identity=44.4444444444444, Blast_Score=153, Evalue=7e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 22502; Mature: 22502
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFNIALVLFFIMDPIGNISSYQTMVKELDRRHQSKIIFREMLIALVAMIFFNYIGEFI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDFLDLSETTVRLSSGIILFLIAIKILFTANDSPRANLPQGEPFIFPLAIPLIAGPGLMA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH TIMLYAHLEPYQSIMLASILIAWTLSVIILYFSKKIKSFLGESGLMASERMIGMVLVLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VQRFLEGILLFWTTQPNPT HHHHHHHHHEEEECCCCCC >Mature Secondary Structure MNIFNIALVLFFIMDPIGNISSYQTMVKELDRRHQSKIIFREMLIALVAMIFFNYIGEFI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDFLDLSETTVRLSSGIILFLIAIKILFTANDSPRANLPQGEPFIFPLAIPLIAGPGLMA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH TIMLYAHLEPYQSIMLASILIAWTLSVIILYFSKKIKSFLGESGLMASERMIGMVLVLIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VQRFLEGILLFWTTQPNPT HHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]