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The map label for this gene is recN [H]

Identifier: 46446311

GI number: 46446311

Start: 825630

End: 827255

Strand: Reverse

Name: recN [H]

Synonym: pc0677

Alternate gene names: 46446311

Gene position: 827255-825630 (Counterclockwise)

Preceding gene: 46446312

Following gene: 46446309

Centisome position: 34.26

GC content: 34.62

Gene sequence:

>1626_bases
ATGCTAAAACAACTCCGTATTCAAAATATCATTTTAGTCGAAAATGCCGATATTTCATTTAGCTCCGGCTTGAACATTCT
AACAGGTGAAACAGGATCTGGTAAATCCGCTATTATGCATGGATTAAGTTTGGCAATTGGTGAAAGAGTCGATACCTCAT
TGATTCGCAAAGGATGCGATAAAGGTATTGTTGAAGCCATATTCGACATTGACCGTCTAGATTTGAACAACCTTCTTGAG
GAAGGAGGGATTGATCACGAATCTCACCAAGATCTCATTATTAGACGAGAAATCGCGATTACGGGTAAGAATCGTATCTT
TATTAATAATCAATCAGCTCAAGCCTCATTTTTGCGAAAATTAGGATCACAAATTGTTCAAATTGTCGGTCAACGAGCCA
ATCAAAATCTATTCAATCTTGATTATCATCGAGAGGTGTTAGATATCTATGGAGGTTTAAGTCCTTTTTTACAGCGTTAT
AAAGAAAGTTATGTTTATGAAAATGAATTAAAAAAACGTTTAGACTTGTTGATTCAGCAAGATGCTCATCGAATGCGTGA
AATAGATATTTGTAAAAGTGAATGGGAAGAGCTAGAAGAAGCTCAATTAAAATCTGGCGAAGACGAGGAACTGTTTACTG
AATATGCGATACTATTTAATAGTGAAGAATTATCTGAAAAAACCCGAGAAATTAACCAAGCTTTAACAGGAGAAAAAGTT
TCTATTTTAGCGATTTTAAATCGCCAAAAACAAAATTTAGAATCTCTTAGTCATTTTGATCCTATTTTAAAAGAAGTTGA
ACAATCTCTTCAAAGTGTTTTTTTAGAGCTTCAAGAAATTTCCCACACTTTGCGTCATTATCAAAACAAACTTAATCATA
ATCCAGAACGCCTACAAATTGTCAATGAGCGCTTAAGTCTTCTAAATCGCTTAAAGCGTAAATATGGAGGAACAATTGAT
GAAGTAATTCATTATCAACAAGAAATTAAACAAAAACTTTACCGATTAGAAAATACCGATATCGAAATAGAAGAACTTAA
AATTGAATTACAACAAGTTCAGACAGATACGAATAATTTAGCTAGAACCTTGTCCGAAAAAAGGGTGCTACTAGCTCGTC
AGCTTCAAACTGCTCTTAGCACTCAATTACATTCTTTAAATATGCCCAAAGCAGAATTCAAAGTCATAATTGAACCTCAG
AAAAGGACATTGATCGGAGATGATAAGATTGAATTTTTTCTTCAACCAAACGTGGGAGAACATCAAATTGCTTTAAAAGA
TGGGGCGAGTGGGGGAGAAATTTCTCGGGTATTATTAGCATTACAAACAATTTTAGCTGGAAAAGAAAAAATTCTAACTT
TGATCTTCGATGAAGTTGATGCGAATATTGGAGGTGAAACAGCTTCCATTGTAGGTGACAAATTAAAAGAAATTGGAAAG
CAACATCAAGTCATTTGTATTACACATTTCCCTCAAGTGGCAAGTCTAGCCGACCATCACTTGCAAATTTCCAAAGTAGA
AAAAGATGGTCGAACTCTCACTCAAGTCCAGAAACTCGACAAAATTTCTTGTCAACAAGAATTAGCGCGTATGGCAGGTC
AAAAGTCTCTTGCTTTCTCACAATAA

Upstream 100 bases:

>100_bases
TTTTTTCTGCACCCAGCTGGAATAAAGATACTTACTTAATGGAAATTAGTGATGGCCGATTAATGCAATTAATTTCTCAA
ACTTTTGATCCTTAAAATTC

Downstream 100 bases:

>100_bases
CTCATTAATCACCCTAAGTTTCAATCAATTGTAAATCATTAGGAATGCGCTTTAATACTACTATGTATGCATTTCTATTT
TGACAGAATTCTTCTCGAGA

Product: putative DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MLKQLRIQNIILVENADISFSSGLNILTGETGSGKSAIMHGLSLAIGERVDTSLIRKGCDKGIVEAIFDIDRLDLNNLLE
EGGIDHESHQDLIIRREIAITGKNRIFINNQSAQASFLRKLGSQIVQIVGQRANQNLFNLDYHREVLDIYGGLSPFLQRY
KESYVYENELKKRLDLLIQQDAHRMREIDICKSEWEELEEAQLKSGEDEELFTEYAILFNSEELSEKTREINQALTGEKV
SILAILNRQKQNLESLSHFDPILKEVEQSLQSVFLELQEISHTLRHYQNKLNHNPERLQIVNERLSLLNRLKRKYGGTID
EVIHYQQEIKQKLYRLENTDIEIEELKIELQQVQTDTNNLARTLSEKRVLLARQLQTALSTQLHSLNMPKAEFKVIIEPQ
KRTLIGDDKIEFFLQPNVGEHQIALKDGASGGEISRVLLALQTILAGKEKILTLIFDEVDANIGGETASIVGDKLKEIGK
QHQVICITHFPQVASLADHHLQISKVEKDGRTLTQVQKLDKISCQQELARMAGQKSLAFSQ

Sequences:

>Translated_541_residues
MLKQLRIQNIILVENADISFSSGLNILTGETGSGKSAIMHGLSLAIGERVDTSLIRKGCDKGIVEAIFDIDRLDLNNLLE
EGGIDHESHQDLIIRREIAITGKNRIFINNQSAQASFLRKLGSQIVQIVGQRANQNLFNLDYHREVLDIYGGLSPFLQRY
KESYVYENELKKRLDLLIQQDAHRMREIDICKSEWEELEEAQLKSGEDEELFTEYAILFNSEELSEKTREINQALTGEKV
SILAILNRQKQNLESLSHFDPILKEVEQSLQSVFLELQEISHTLRHYQNKLNHNPERLQIVNERLSLLNRLKRKYGGTID
EVIHYQQEIKQKLYRLENTDIEIEELKIELQQVQTDTNNLARTLSEKRVLLARQLQTALSTQLHSLNMPKAEFKVIIEPQ
KRTLIGDDKIEFFLQPNVGEHQIALKDGASGGEISRVLLALQTILAGKEKILTLIFDEVDANIGGETASIVGDKLKEIGK
QHQVICITHFPQVASLADHHLQISKVEKDGRTLTQVQKLDKISCQQELARMAGQKSLAFSQ
>Mature_541_residues
MLKQLRIQNIILVENADISFSSGLNILTGETGSGKSAIMHGLSLAIGERVDTSLIRKGCDKGIVEAIFDIDRLDLNNLLE
EGGIDHESHQDLIIRREIAITGKNRIFINNQSAQASFLRKLGSQIVQIVGQRANQNLFNLDYHREVLDIYGGLSPFLQRY
KESYVYENELKKRLDLLIQQDAHRMREIDICKSEWEELEEAQLKSGEDEELFTEYAILFNSEELSEKTREINQALTGEKV
SILAILNRQKQNLESLSHFDPILKEVEQSLQSVFLELQEISHTLRHYQNKLNHNPERLQIVNERLSLLNRLKRKYGGTID
EVIHYQQEIKQKLYRLENTDIEIEELKIELQQVQTDTNNLARTLSEKRVLLARQLQTALSTQLHSLNMPKAEFKVIIEPQ
KRTLIGDDKIEFFLQPNVGEHQIALKDGASGGEISRVLLALQTILAGKEKILTLIFDEVDANIGGETASIVGDKLKEIGK
QHQVICITHFPQVASLADHHLQISKVEKDGRTLTQVQKLDKISCQQELARMAGQKSLAFSQ

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=537, Percent_Identity=32.2160148975791, Blast_Score=252, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61644; Mature: 61644

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQLRIQNIILVENADISFSSGLNILTGETGSGKSAIMHGLSLAIGERVDTSLIRKGCD
CCCHHEECCEEEEECCCCCHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KGIVEAIFDIDRLDLNNLLEEGGIDHESHQDLIIRREIAITGKNRIFINNQSAQASFLRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHH
LGSQIVQIVGQRANQNLFNLDYHREVLDIYGGLSPFLQRYKESYVYENELKKRLDLLIQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAHRMREIDICKSEWEELEEAQLKSGEDEELFTEYAILFNSEELSEKTREINQALTGEKV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
SILAILNRQKQNLESLSHFDPILKEVEQSLQSVFLELQEISHTLRHYQNKLNHNPERLQI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VNERLSLLNRLKRKYGGTIDEVIHYQQEIKQKLYRLENTDIEIEELKIELQQVQTDTNNL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
ARTLSEKRVLLARQLQTALSTQLHSLNMPKAEFKVIIEPQKRTLIGDDKIEFFLQPNVGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEECCCCEEEEECCCCCC
HQIALKDGASGGEISRVLLALQTILAGKEKILTLIFDEVDANIGGETASIVGDKLKEIGK
EEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QHQVICITHFPQVASLADHHLQISKVEKDGRTLTQVQKLDKISCQQELARMAGQKSLAFS
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q
C
>Mature Secondary Structure
MLKQLRIQNIILVENADISFSSGLNILTGETGSGKSAIMHGLSLAIGERVDTSLIRKGCD
CCCHHEECCEEEEECCCCCHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
KGIVEAIFDIDRLDLNNLLEEGGIDHESHQDLIIRREIAITGKNRIFINNQSAQASFLRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCEEEEECCHHHHHHHHH
LGSQIVQIVGQRANQNLFNLDYHREVLDIYGGLSPFLQRYKESYVYENELKKRLDLLIQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAHRMREIDICKSEWEELEEAQLKSGEDEELFTEYAILFNSEELSEKTREINQALTGEKV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
SILAILNRQKQNLESLSHFDPILKEVEQSLQSVFLELQEISHTLRHYQNKLNHNPERLQI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VNERLSLLNRLKRKYGGTIDEVIHYQQEIKQKLYRLENTDIEIEELKIELQQVQTDTNNL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH
ARTLSEKRVLLARQLQTALSTQLHSLNMPKAEFKVIIEPQKRTLIGDDKIEFFLQPNVGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEECCCCEEEEECCCCCC
HQIALKDGASGGEISRVLLALQTILAGKEKILTLIFDEVDANIGGETASIVGDKLKEIGK
EEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
QHQVICITHFPQVASLADHHLQISKVEKDGRTLTQVQKLDKISCQQELARMAGQKSLAFS
CCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]