Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446312

Identifier: 46446312

GI number: 46446312

Start: 827261

End: 827701

Strand: Reverse

Name: 46446312

Synonym: pc0678

Alternate gene names: NA

Gene position: 827701-827261 (Counterclockwise)

Preceding gene: 46446313

Following gene: 46446311

Centisome position: 34.28

GC content: 31.07

Gene sequence:

>441_bases
ATGACAAATAAAACCTTAGTTTATTTAACTTTTCTTGTTTTAATTGGAATGGCTATTTTATTTGCTTTAAACATGACCTC
ATTATTAAGTGGTCAACCCGATAATCAAACATATTTAAAATACAATCAAGTGAGAGGCATAGCTGTTTCTCACAATAAAA
AGCTTTACACACTTAATTTTAAACAACAAAATGATTTAATTGAGATATTGAACCGTGCAGTTCGGGTTGTTGGAGTTAAG
CCTGGTAAAAGACAACGACCTAACATCGATCAAATCATTATTTATCAGTTCAAAGACCAGCCAGATATTGTGATCACTCC
TATTGCTTATGTTGATAATAATCTTGTTTTTTCTGCACCCAGCTGGAATAAAGATACTTACTTAATGGAAATTAGTGATG
GCCGATTAATGCAATTAATTTCTCAAACTTTTGATCCTTAA

Upstream 100 bases:

>100_bases
AAATAGTGGCAAGAATTAGACCTTCTAACAAAATAAGTTGAAAAGTTAACATCTCGTTAGCCTTTCACTAACCAAATAAT
GATTAAATTGCAGGTCGTGC

Downstream 100 bases:

>100_bases
AATTCATGCTAAAACAACTCCGTATTCAAAATATCATTTTAGTCGAAAATGCCGATATTTCATTTAGCTCCGGCTTGAAC
ATTCTAACAGGTGAAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTNKTLVYLTFLVLIGMAILFALNMTSLLSGQPDNQTYLKYNQVRGIAVSHNKKLYTLNFKQQNDLIEILNRAVRVVGVK
PGKRQRPNIDQIIIYQFKDQPDIVITPIAYVDNNLVFSAPSWNKDTYLMEISDGRLMQLISQTFDP

Sequences:

>Translated_146_residues
MTNKTLVYLTFLVLIGMAILFALNMTSLLSGQPDNQTYLKYNQVRGIAVSHNKKLYTLNFKQQNDLIEILNRAVRVVGVK
PGKRQRPNIDQIIIYQFKDQPDIVITPIAYVDNNLVFSAPSWNKDTYLMEISDGRLMQLISQTFDP
>Mature_145_residues
TNKTLVYLTFLVLIGMAILFALNMTSLLSGQPDNQTYLKYNQVRGIAVSHNKKLYTLNFKQQNDLIEILNRAVRVVGVKP
GKRQRPNIDQIIIYQFKDQPDIVITPIAYVDNNLVFSAPSWNKDTYLMEISDGRLMQLISQTFDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16753; Mature: 16622

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKTLVYLTFLVLIGMAILFALNMTSLLSGQPDNQTYLKYNQVRGIAVSHNKKLYTLNF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCCEEEEEEC
KQQNDLIEILNRAVRVVGVKPGKRQRPNIDQIIIYQFKDQPDIVITPIAYVDNNLVFSAP
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEHEEECCCEEEECC
SWNKDTYLMEISDGRLMQLISQTFDP
CCCCCEEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure 
TNKTLVYLTFLVLIGMAILFALNMTSLLSGQPDNQTYLKYNQVRGIAVSHNKKLYTLNF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCCEEEEEEC
KQQNDLIEILNRAVRVVGVKPGKRQRPNIDQIIIYQFKDQPDIVITPIAYVDNNLVFSAP
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEHEEECCCEEEECC
SWNKDTYLMEISDGRLMQLISQTFDP
CCCCCEEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA