Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46446309

Identifier: 46446309

GI number: 46446309

Start: 822370

End: 823332

Strand: Reverse

Name: 46446309

Synonym: pc0675

Alternate gene names: NA

Gene position: 823332-822370 (Counterclockwise)

Preceding gene: 46446311

Following gene: 46446308

Centisome position: 34.1

GC content: 35.62

Gene sequence:

>963_bases
GTGAAAAAATTTTGGCTTTATGCATGTTTAACATTAAACTGCACTTTTTCTCTTTTAGCAACCGATATCGCTTTAGATTT
TAGTGATTATGGAACAGAATCTCTAGTTAGAGATTCCAATAGTGAAACCTTTTATCAACAAACAGGAGAGCAAAAATCAT
ATCCTTATAACTTTAACGTTTATTTTGATAGCATTAGCGATGCCAAAATCGATCGAGGATATTACAAAGGTGATAAGGTT
CGTTACAAGGCTGTAGAAGCAGAACTAGGAATGGTTTTCTATAATCGTCCTACCTATTCGGAAGCCGCTAATGTGGCAAT
CAGCTATACAGAGACATATTTACACTGGTCAGAAAATCCATGGTTTGACCAAGATCGTTTTCACACACTTTCTTTTAGCG
TGGGCGGAGTGACTAAAAGGCTTAGAAATTGGTTTTGGAGAAGTCAATTAGACATCAACTACGATACAACAGGAAGCTCT
GTAAACTCTCAATATTTATATTATGATCTTCTCTTATGGGGCCGTTATGAATATAGCCAAAATTTTGGATTTCATATCGG
TTTTATTGGCCAGACCGGCATGGGTCTAGATAAAGTTTACCCCATTTTGGGAGCTGATTGGCAAATGTCTAGAAACTGGA
AATTGAATTTAGTATTTCCTGTTAATGTATCTTTAGAATACAACTTAAACAATCAGTGGTCTTTAGCGATTGCAGGTCGA
AATTTTGATATTAGACACAGAGTAAAAAAAGATGAAAGTTACGGGAAATCATTAATTCGTTACCAAAATATAGGAGCAGA
ATTGGCAGTAAAATACAATACTGATTTTTTAACTGCGAATCTCCATGCTGGAACAACACTCGGCGGTAAGTACCGAATTT
CTAATCATAATAACCATCATCCTCATCATTACAATTTACGCCCAAGTGGTTATTTTGGCGGCGAAGTAGACATTAAATTC
TAA

Upstream 100 bases:

>100_bases
TTTTTCAATAATGGTTAGTCGAAAATTAAATTTTGAGATGCTTGCCTCTAGAAAAAATAAAAACTTGTTAGATATTTGTA
AATTTGGGTAGGACAAGAAC

Downstream 100 bases:

>100_bases
AGAAAAAAACTTTGTCATTCAAACTTGAATGACAAAGTTTTATAGACCTAATTTCCTCTAAAAATTTATTTCCATAAATA
AAAATCAAGTTAACTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV
RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS
VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR
NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF

Sequences:

>Translated_320_residues
MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV
RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS
VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR
NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF
>Mature_320_residues
MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV
RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS
VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR
NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0441/CT_007/TC_0275 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37311; Mature: 37311

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNV
CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEE
YFDSISDAKIDRGYYKGDKVRYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENP
EEECCCCCEECCCEECCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCC
WFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSSVNSQYLYYDLLLWGRYEYSQ
CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCC
NFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR
CCCEEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEEEEEEEEECCCCEEEEEEECC
NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHH
CCCCHHHCCCCHHHHHHHHEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCC
PHHYNLRPSGYFGGEVDIKF
CEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNV
CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEE
YFDSISDAKIDRGYYKGDKVRYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENP
EEECCCCCEECCCEECCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCC
WFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSSVNSQYLYYDLLLWGRYEYSQ
CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCC
NFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR
CCCEEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEEEEEEEEECCCCEEEEEEECC
NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHH
CCCCHHHCCCCHHHHHHHHEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCC
PHHYNLRPSGYFGGEVDIKF
CEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]