| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46446309
Identifier: 46446309
GI number: 46446309
Start: 822370
End: 823332
Strand: Reverse
Name: 46446309
Synonym: pc0675
Alternate gene names: NA
Gene position: 823332-822370 (Counterclockwise)
Preceding gene: 46446311
Following gene: 46446308
Centisome position: 34.1
GC content: 35.62
Gene sequence:
>963_bases GTGAAAAAATTTTGGCTTTATGCATGTTTAACATTAAACTGCACTTTTTCTCTTTTAGCAACCGATATCGCTTTAGATTT TAGTGATTATGGAACAGAATCTCTAGTTAGAGATTCCAATAGTGAAACCTTTTATCAACAAACAGGAGAGCAAAAATCAT ATCCTTATAACTTTAACGTTTATTTTGATAGCATTAGCGATGCCAAAATCGATCGAGGATATTACAAAGGTGATAAGGTT CGTTACAAGGCTGTAGAAGCAGAACTAGGAATGGTTTTCTATAATCGTCCTACCTATTCGGAAGCCGCTAATGTGGCAAT CAGCTATACAGAGACATATTTACACTGGTCAGAAAATCCATGGTTTGACCAAGATCGTTTTCACACACTTTCTTTTAGCG TGGGCGGAGTGACTAAAAGGCTTAGAAATTGGTTTTGGAGAAGTCAATTAGACATCAACTACGATACAACAGGAAGCTCT GTAAACTCTCAATATTTATATTATGATCTTCTCTTATGGGGCCGTTATGAATATAGCCAAAATTTTGGATTTCATATCGG TTTTATTGGCCAGACCGGCATGGGTCTAGATAAAGTTTACCCCATTTTGGGAGCTGATTGGCAAATGTCTAGAAACTGGA AATTGAATTTAGTATTTCCTGTTAATGTATCTTTAGAATACAACTTAAACAATCAGTGGTCTTTAGCGATTGCAGGTCGA AATTTTGATATTAGACACAGAGTAAAAAAAGATGAAAGTTACGGGAAATCATTAATTCGTTACCAAAATATAGGAGCAGA ATTGGCAGTAAAATACAATACTGATTTTTTAACTGCGAATCTCCATGCTGGAACAACACTCGGCGGTAAGTACCGAATTT CTAATCATAATAACCATCATCCTCATCATTACAATTTACGCCCAAGTGGTTATTTTGGCGGCGAAGTAGACATTAAATTC TAA
Upstream 100 bases:
>100_bases TTTTTCAATAATGGTTAGTCGAAAATTAAATTTTGAGATGCTTGCCTCTAGAAAAAATAAAAACTTGTTAGATATTTGTA AATTTGGGTAGGACAAGAAC
Downstream 100 bases:
>100_bases AGAAAAAAACTTTGTCATTCAAACTTGAATGACAAAGTTTTATAGACCTAATTTCCTCTAAAAATTTATTTCCATAAATA AAAATCAAGTTAACTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF
Sequences:
>Translated_320_residues MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF >Mature_320_residues MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNVYFDSISDAKIDRGYYKGDKV RYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENPWFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSS VNSQYLYYDLLLWGRYEYSQNFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHHPHHYNLRPSGYFGGEVDIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0441/CT_007/TC_0275 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37311; Mature: 37311
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNV CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEE YFDSISDAKIDRGYYKGDKVRYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENP EEECCCCCEECCCEECCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCC WFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSSVNSQYLYYDLLLWGRYEYSQ CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCC NFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR CCCEEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEEEEEEEEECCCCEEEEEEECC NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHH CCCCHHHCCCCHHHHHHHHEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCC PHHYNLRPSGYFGGEVDIKF CEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MKKFWLYACLTLNCTFSLLATDIALDFSDYGTESLVRDSNSETFYQQTGEQKSYPYNFNV CCEEEEEEEEEECCEEEEEEEEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCCCEEEEE YFDSISDAKIDRGYYKGDKVRYKAVEAELGMVFYNRPTYSEAANVAISYTETYLHWSENP EEECCCCCEECCCEECCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEECCCC WFDQDRFHTLSFSVGGVTKRLRNWFWRSQLDINYDTTGSSVNSQYLYYDLLLWGRYEYSQ CCCCCCEEEEEEEHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCC NFGFHIGFIGQTGMGLDKVYPILGADWQMSRNWKLNLVFPVNVSLEYNLNNQWSLAIAGR CCCEEEEEECCCCCCHHHHHHHCCCCEEECCCEEEEEEEEEEEEEEECCCCEEEEEEECC NFDIRHRVKKDESYGKSLIRYQNIGAELAVKYNTDFLTANLHAGTTLGGKYRISNHNNHH CCCCHHHCCCCHHHHHHHHEEECCCEEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCC PHHYNLRPSGYFGGEVDIKF CEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]