The gene/protein map for NC_012032 is currently unavailable.
Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is ppaA

Identifier: 46445969

GI number: 46445969

Start: 456154

End: 458082

Strand: Reverse

Name: ppaA

Synonym: pc0335

Alternate gene names: NA

Gene position: 458082-456154 (Counterclockwise)

Preceding gene: 46445970

Following gene: 46445968

Centisome position: 18.97

GC content: 36.5

Gene sequence:

>1929_bases
ATGTATATTCATAATCCAAATTTTCATCAACCTACTCTCAATGCCAATGCAGACATTCACTTTTACTATCCATCAAACGA
TTGTTTAAAATTTTCTAAACGAATAAATTTATTATGCAAAACAATTTTTCAGTCCTTCCTGAACCTATTCTTTAACTATA
TCAATAGAGATCAGCTTCAATCTCAATGGAGAGAGATCTTTTGGGGGCGAAAAGAGATTGCCACAACTCGTCCAGAATCT
AGTGTATCTTTATCAAGCTCGACTCAAACTCCAGTTTTTGTCCTCCCTTCTTCAGAAAAGGCTCGCACTCAGGAAACTAT
TGATAATTCTAAGGACGAAAACAAACCCTTAGTAAATTCTTTAGTTGCCATAGAAGAAATTGAGGCACCCACAATTCAAC
CTTCCAATCCTTCGCCTTTTTCCCAAGAGAAATTTAAACTAAGCTTTCAGGATGGAACTTCTCTAATTATCCATATTTCT
CAACTATCTTTGTTAAGGGAAAAATCACCCTATTTTAACTGTCTTTGGTCGGGAAATTTTCAAGAAACTCTTCGAGAATC
TCTCGCTTTGACGCAAAAAGAGTTTACTAAACTGCTCAATTGCCTGGATGACGATTTTAAAGTTCCTTTGAAAAAGATCT
GTTCTTTCATTCAACTGACCAATTATTATCAACTGACAGAAGTTGTGAAAAATTTAGAAAAACAGCTGCTTGATGCATAC
AAATCAGATAAATTTGAGCTATTTAACTTCCATGAAGACAACCTAATAGAATTAAAAAAACTTTTAAATTTTGCGCAACA
ATATCAATTAAATACTTTAAAAAATTACTTAGAGCTCACAGTTGTGAGTGCATTATTAAACCAGACTTCTCATTTAACAG
AATTTGAAAAAATTTTAAACCACTTTTCAAATGAGATAGAAGCACTTAATTTTTCAAAGAATGCTCATTTGACTGATGCT
CAACTCTTAACGTTAAAAAATTGTAAAAATTTAAAAGTGCTTCAACTTCAAGCATGCCACAATTTTACCGATGCTGGATT
AGCACACTTGACTCCCTTAATGGCTTTACAGCATTTAAACTTGAGCTATTGTAAAAATCTCACTGACGCTGGATTAGCAC
ATTTAGCTCCCTTAGTGGTTTTACAACATTTAAATTTATCTAGTTGCCATAATCTCACGGATGCAGGCTTAGCGCATTTG
ACACCTTTAGTGGCTTTAACGCATTTAAATCTGAGTTGGTGCAATAAACTCACCGATGCAGGATTAGCACATTTAACTCC
CTTAGTGGCTTTAACGCATTTAGATTTGCGTGAATGCGATAAGCTTACTAATAGAGGATTAGCGCATTTGGCGCTCTTAT
TGACTTTACAATATTTAGATCTGAACTATTGTAGAAATCTTACTGACGCTGGATTAGCGCACTTGTCATCCTTAGTTGCT
TTACAGCATTTAAAGCTATGTTGTTGCGTTAGTCTCACTGATGCTGGATTAGCGCATTTGGCTCCCTTAGTGGCTTTAAC
GCATTTGGATCTGAGTTGGTGCTTTAATATCACTGACGCTGGATTAGCGCATTTGACTCCCTTAGTGACTTTACAGCATT
TAGGTCTGAGCGGGTGCCGTAGACTCACTGATGTGGGATTAGCACATTTGACTCGCTTAGTGGCTTTACAGCATTTAGGT
TTGAATAGATGCGATAATCTCACTGATGCTGGATTAGCGCATTTGACTCCCTTAATAAATTTACAGCATTTAGATCTGAG
TGAGTGTCGTAAACTCACTAACGCTGGGTTAGCGCATTTGACACCTTTGGTGGCTTTACAGCGTTTAGATCTGCGTTGCT
GCAATAAGCTCACTGGCGCTAGATTAGCGCATTTTAAATTCCTAGTAGCTAAACCACATTTGGATCTGCGTTGGTACAAA
AACTCTTAA

Upstream 100 bases:

>100_bases
ATCGAGCAATTTTCATTTAAATCTAATTGCCTATTTTAATTTCACTAATATTGATTGTATTATATAGCTAAAAATTATTT
AGCTAATTTGGGGGATAATT

Downstream 100 bases:

>100_bases
AATGCTAAATACAGAAATATTATTCGCTTTTCTAAAGCAAATAAAATTACAGATTTCCTAGTGATGTCTAAAGAATAAGG
TTTCCATTCTTAGCCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MYIHNPNFHQPTLNANADIHFYYPSNDCLKFSKRINLLCKTIFQSFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTPVFVLPSSEKARTQETIDNSKDENKPLVNSLVAIEEIEAPTIQPSNPSPFSQEKFKLSFQDGTSLIIHIS
QLSLLREKSPYFNCLWSGNFQETLRESLALTQKEFTKLLNCLDDDFKVPLKKICSFIQLTNYYQLTEVVKNLEKQLLDAY
KSDKFELFNFHEDNLIELKKLLNFAQQYQLNTLKNYLELTVVSALLNQTSHLTEFEKILNHFSNEIEALNFSKNAHLTDA
QLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHL
TPLVALTHLNLSWCNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVA
LQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLG
LNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGARLAHFKFLVAKPHLDLRWYK
NS

Sequences:

>Translated_642_residues
MYIHNPNFHQPTLNANADIHFYYPSNDCLKFSKRINLLCKTIFQSFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTPVFVLPSSEKARTQETIDNSKDENKPLVNSLVAIEEIEAPTIQPSNPSPFSQEKFKLSFQDGTSLIIHIS
QLSLLREKSPYFNCLWSGNFQETLRESLALTQKEFTKLLNCLDDDFKVPLKKICSFIQLTNYYQLTEVVKNLEKQLLDAY
KSDKFELFNFHEDNLIELKKLLNFAQQYQLNTLKNYLELTVVSALLNQTSHLTEFEKILNHFSNEIEALNFSKNAHLTDA
QLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHL
TPLVALTHLNLSWCNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVA
LQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLG
LNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGARLAHFKFLVAKPHLDLRWYK
NS
>Mature_642_residues
MYIHNPNFHQPTLNANADIHFYYPSNDCLKFSKRINLLCKTIFQSFLNLFFNYINRDQLQSQWREIFWGRKEIATTRPES
SVSLSSSTQTPVFVLPSSEKARTQETIDNSKDENKPLVNSLVAIEEIEAPTIQPSNPSPFSQEKFKLSFQDGTSLIIHIS
QLSLLREKSPYFNCLWSGNFQETLRESLALTQKEFTKLLNCLDDDFKVPLKKICSFIQLTNYYQLTEVVKNLEKQLLDAY
KSDKFELFNFHEDNLIELKKLLNFAQQYQLNTLKNYLELTVVSALLNQTSHLTEFEKILNHFSNEIEALNFSKNAHLTDA
QLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLNLSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHL
TPLVALTHLNLSWCNKLTDAGLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVA
LQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCRRLTDVGLAHLTRLVALQHLG
LNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHLTPLVALQRLDLRCCNKLTGARLAHFKFLVAKPHLDLRWYK
NS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI22748931, Length=305, Percent_Identity=35.4098360655738, Blast_Score=148, Evalue=2e-35,
Organism=Homo sapiens, GI284447308, Length=410, Percent_Identity=29.5121951219512, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI27734755, Length=405, Percent_Identity=29.6296296296296, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI161333852, Length=320, Percent_Identity=28.75, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI6912466, Length=285, Percent_Identity=30.5263157894737, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI296531375, Length=400, Percent_Identity=29, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI289666746, Length=264, Percent_Identity=36.3636363636364, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI161333854, Length=411, Percent_Identity=25.0608272506083, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI284447314, Length=240, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI25151694, Length=320, Percent_Identity=29.6875, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI25151696, Length=320, Percent_Identity=29.6875, Blast_Score=102, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6322549, Length=350, Percent_Identity=27.4285714285714, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17647819, Length=298, Percent_Identity=34.8993288590604, Blast_Score=136, Evalue=5e-32,
Organism=Drosophila melanogaster, GI24662818, Length=258, Percent_Identity=37.2093023255814, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24652783, Length=308, Percent_Identity=29.8701298701299, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076545, Length=308, Percent_Identity=29.8701298701299, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI161076549, Length=308, Percent_Identity=29.8701298701299, Blast_Score=93, Evalue=6e-19,
Organism=Drosophila melanogaster, GI161076547, Length=308, Percent_Identity=29.8701298701299, Blast_Score=93, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21357913, Length=280, Percent_Identity=31.7857142857143, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72459; Mature: 72459

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIHNPNFHQPTLNANADIHFYYPSNDCLKFSKRINLLCKTIFQSFLNLFFNYINRDQLQ
CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SQWREIFWGRKEIATTRPESSVSLSSSTQTPVFVLPSSEKARTQETIDNSKDENKPLVNS
HHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHH
LVAIEEIEAPTIQPSNPSPFSQEKFKLSFQDGTSLIIHISQLSLLREKSPYFNCLWSGNF
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCCEEEEECCCH
QETLRESLALTQKEFTKLLNCLDDDFKVPLKKICSFIQLTNYYQLTEVVKNLEKQLLDAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSDKFELFNFHEDNLIELKKLLNFAQQYQLNTLKNYLELTVVSALLNQTSHLTEFEKILN
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFSNEIEALNFSKNAHLTDAQLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLN
HHHHHHHEECCCCCCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCC
LSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSWCNKLTDA
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVA
CHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHH
RLTDVGLAHLTRLVALQHLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHH
TPLVALQRLDLRCCNKLTGARLAHFKFLVAKPHLDLRWYKNS
HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCEEEEECCC
>Mature Secondary Structure
MYIHNPNFHQPTLNANADIHFYYPSNDCLKFSKRINLLCKTIFQSFLNLFFNYINRDQLQ
CCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
SQWREIFWGRKEIATTRPESSVSLSSSTQTPVFVLPSSEKARTQETIDNSKDENKPLVNS
HHHHHHHCCCHHHHCCCCCCCCEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHH
LVAIEEIEAPTIQPSNPSPFSQEKFKLSFQDGTSLIIHISQLSLLREKSPYFNCLWSGNF
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHCCCCEEEEECCCH
QETLRESLALTQKEFTKLLNCLDDDFKVPLKKICSFIQLTNYYQLTEVVKNLEKQLLDAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSDKFELFNFHEDNLIELKKLLNFAQQYQLNTLKNYLELTVVSALLNQTSHLTEFEKILN
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFSNEIEALNFSKNAHLTDAQLLTLKNCKNLKVLQLQACHNFTDAGLAHLTPLMALQHLN
HHHHHHHEECCCCCCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHCC
LSYCKNLTDAGLAHLAPLVVLQHLNLSSCHNLTDAGLAHLTPLVALTHLNLSWCNKLTDA
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
GLAHLTPLVALTHLDLRECDKLTNRGLAHLALLLTLQYLDLNYCRNLTDAGLAHLSSLVA
CHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQHLKLCCCVSLTDAGLAHLAPLVALTHLDLSWCFNITDAGLAHLTPLVTLQHLGLSGCR
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHH
RLTDVGLAHLTRLVALQHLGLNRCDNLTDAGLAHLTPLINLQHLDLSECRKLTNAGLAHL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCHHHH
TPLVALQRLDLRCCNKLTGARLAHFKFLVAKPHLDLRWYKNS
HHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA