Click here to switch to the map view.

The map label for this gene is yfbE [C]

Identifier: 46445942

GI number: 46445942

Start: 426070

End: 427242

Strand: Direct

Name: yfbE [C]

Synonym: pc0308

Alternate gene names: 46445942

Gene position: 426070-427242 (Clockwise)

Preceding gene: 46445939

Following gene: 46445945

Centisome position: 17.65

GC content: 37.17

Gene sequence:

>1173_bases
ATGACGAAATTTTCATTTATTCCTTATGCAAAACAGACTATCGAGCAAGAAGATATTGAGAGTGTAATGAATGCCTTGAA
AGAAGATGCAATTACTCGAGGCCCTCCTGTTAAAGCTTTTGAAGAAGCGATAGCAAATGATTGTAATGTGCGTTATGCAG
TTGCCTTCACTAATGGAACAGCCGCGCTTATGGCTGCTTATTTTGCAGCCGAATTACAACCTTATGATTATGTGATTTCT
TCGCCCAATACCTTTATTGCAACTGTTGGAATTCCTTTACAGCAAAAATTACAAATTCATTTTACCGACATTGACAGAGA
AACAGGAAATTTAGATCTCTCTCAAATCAAAAAAATGTCTAGCATCCAACTTAGTCGTGGACGTTTTATTGTTGTTCCCG
TCCATTTTTCAGGCCTTGCAGTCGATATGCAGGCTTTGGATTATTTGATTTGCCAACCTAATGCCGTTGTGATTGAAGAT
GCTGCTCATGCCATTGGGTCTTTTTATCCCAGTGGAGAAAAAGTGGGAAGTTGTGTTTACAGTAATATGACTATTTTTAG
TTTTCATCCAACTAAAACAATCACAACAGGGGAAGGGGGAATGGTGACAACTAATGACCCTGGCCTTTATCATCGTTTAC
TTTTATTTCGAGATAATGGAATTGAGCGAGAGAACCCTTACCTTTTAAATGCGCAAATGCCCGGCTATTATGAAGTTCAT
GCGATTACAGGGAATTTTAATGTAACAAGCTTGCAAGGGGCTTTGGGTCTTAGCCAATTAAAAAGGTTGAAAGCTTTTGT
GGAAAAACGTCGCCTTCTCATTCAGCATTACCGCCAAGCTCTAAAAGACTTCCTTCATTTAAAGCTATTCACAAATTCTC
AAGATGACATAACGGCGTTTCATTTATTTGTCATTCAAATCGATTTTGAAGCCTATCAGACAACACGTGAAAGTGTAATG
GAAAAGTTGAAACAGCAGGGAATTGGAACGCAGGTTCATTATATTCCTTTATATAGACATCCTATTTTTAAAAATCGCAA
TCAAGATTGGCAAAACCTTTTTCCAAATATGGAAGCTTATTATAAACAAACTTTAACATTACCTCTTTATCCAGAGCTAA
CCACGAAGGATGTAGATCGAATCTGCGAGATACTCAAATCAATTTTAAAATAA

Upstream 100 bases:

>100_bases
TATGAATTTTGGATTAAGAGTTTAAAAAGCAGATGCAATAAAGAAAAAAACTTAAAATTCAAGCAGATCATCAAATCAGT
TCAGCTAGGAAACGACAACT

Downstream 100 bases:

>100_bases
ATTATTTAAATTTGGTTTTATTTCTAATTGGCGAGTGAGCTTACTTAAAATTTTTATTTTTAAATATTGTGAAGTTAATG
ACTTAAAAAAAATCTAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTKFSFIPYAKQTIEQEDIESVMNALKEDAITRGPPVKAFEEAIANDCNVRYAVAFTNGTAALMAAYFAAELQPYDYVIS
SPNTFIATVGIPLQQKLQIHFTDIDRETGNLDLSQIKKMSSIQLSRGRFIVVPVHFSGLAVDMQALDYLICQPNAVVIED
AAHAIGSFYPSGEKVGSCVYSNMTIFSFHPTKTITTGEGGMVTTNDPGLYHRLLLFRDNGIERENPYLLNAQMPGYYEVH
AITGNFNVTSLQGALGLSQLKRLKAFVEKRRLLIQHYRQALKDFLHLKLFTNSQDDITAFHLFVIQIDFEAYQTTRESVM
EKLKQQGIGTQVHYIPLYRHPIFKNRNQDWQNLFPNMEAYYKQTLTLPLYPELTTKDVDRICEILKSILK

Sequences:

>Translated_390_residues
MTKFSFIPYAKQTIEQEDIESVMNALKEDAITRGPPVKAFEEAIANDCNVRYAVAFTNGTAALMAAYFAAELQPYDYVIS
SPNTFIATVGIPLQQKLQIHFTDIDRETGNLDLSQIKKMSSIQLSRGRFIVVPVHFSGLAVDMQALDYLICQPNAVVIED
AAHAIGSFYPSGEKVGSCVYSNMTIFSFHPTKTITTGEGGMVTTNDPGLYHRLLLFRDNGIERENPYLLNAQMPGYYEVH
AITGNFNVTSLQGALGLSQLKRLKAFVEKRRLLIQHYRQALKDFLHLKLFTNSQDDITAFHLFVIQIDFEAYQTTRESVM
EKLKQQGIGTQVHYIPLYRHPIFKNRNQDWQNLFPNMEAYYKQTLTLPLYPELTTKDVDRICEILKSILK
>Mature_389_residues
TKFSFIPYAKQTIEQEDIESVMNALKEDAITRGPPVKAFEEAIANDCNVRYAVAFTNGTAALMAAYFAAELQPYDYVISS
PNTFIATVGIPLQQKLQIHFTDIDRETGNLDLSQIKKMSSIQLSRGRFIVVPVHFSGLAVDMQALDYLICQPNAVVIEDA
AHAIGSFYPSGEKVGSCVYSNMTIFSFHPTKTITTGEGGMVTTNDPGLYHRLLLFRDNGIERENPYLLNAQMPGYYEVHA
ITGNFNVTSLQGALGLSQLKRLKAFVEKRRLLIQHYRQALKDFLHLKLFTNSQDDITAFHLFVIQIDFEAYQTTRESVME
KLKQQGIGTQVHYIPLYRHPIFKNRNQDWQNLFPNMEAYYKQTLTLPLYPELTTKDVDRICEILKSILK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=391, Percent_Identity=27.8772378516624, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI2367285, Length=287, Percent_Identity=29.2682926829268, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44318; Mature: 44187

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFSFIPYAKQTIEQEDIESVMNALKEDAITRGPPVKAFEEAIANDCNVRYAVAFTNGT
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCH
AALMAAYFAAELQPYDYVISSPNTFIATVGIPLQQKLQIHFTDIDRETGNLDLSQIKKMS
HHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
SIQLSRGRFIVVPVHFSGLAVDMQALDYLICQPNAVVIEDAAHAIGSFYPSGEKVGSCVY
HCEECCCCEEEEEEECCCEEEEHHHHHHEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHC
SNMTIFSFHPTKTITTGEGGMVTTNDPGLYHRLLLFRDNGIERENPYLLNAQMPGYYEVH
CCEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEE
AITGNFNVTSLQGALGLSQLKRLKAFVEKRRLLIQHYRQALKDFLHLKLFTNSQDDITAF
EEECCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE
HLFVIQIDFEAYQTTRESVMEKLKQQGIGTQVHYIPLYRHPIFKNRNQDWQNLFPNMEAY
EEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCHHHH
YKQTLTLPLYPELTTKDVDRICEILKSILK
HHHEEEEECCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TKFSFIPYAKQTIEQEDIESVMNALKEDAITRGPPVKAFEEAIANDCNVRYAVAFTNGT
CCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEEECCH
AALMAAYFAAELQPYDYVISSPNTFIATVGIPLQQKLQIHFTDIDRETGNLDLSQIKKMS
HHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHH
SIQLSRGRFIVVPVHFSGLAVDMQALDYLICQPNAVVIEDAAHAIGSFYPSGEKVGSCVY
HCEECCCCEEEEEEECCCEEEEHHHHHHEEECCCEEEEEHHHHHHHCCCCCCHHHHHHHC
SNMTIFSFHPTKTITTGEGGMVTTNDPGLYHRLLLFRDNGIERENPYLLNAQMPGYYEVH
CCEEEEEECCCCEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEE
AITGNFNVTSLQGALGLSQLKRLKAFVEKRRLLIQHYRQALKDFLHLKLFTNSQDDITAF
EEECCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEE
HLFVIQIDFEAYQTTRESVMEKLKQQGIGTQVHYIPLYRHPIFKNRNQDWQNLFPNMEAY
EEEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCHHHH
YKQTLTLPLYPELTTKDVDRICEILKSILK
HHHEEEEECCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]