| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is ntt_3 [H]
Identifier: 46445874
GI number: 46445874
Start: 337044
End: 338654
Strand: Direct
Name: ntt_3 [H]
Synonym: pc0240
Alternate gene names: 46445874
Gene position: 337044-338654 (Clockwise)
Preceding gene: 46445873
Following gene: 46445875
Centisome position: 13.96
GC content: 36.25
Gene sequence:
>1611_bases ATGTCACAGACACCAACAGGGTCCCGTGAATTTAGTCCATGGCGGAGCAATCTTTGGCCCGTTCATCGCTATGAGCTTAA AAAACTCATCCCAATGTTGTTAATATTCTTTTTTATTTCTTTTGATTACAACATATTACGTACTTTAAAAGACTCACTAC TTATAACTGCAAAATCTTCAGGTGCTGAGGTCATTCCTTTTGTAAAGGTTTGGGCTATGTTCCCTGGAGCTATTTTAATG ACCCTTTTGTTCACTTGGTTGTCTAATCGCCTGTCAAGAGAAATCGTTTTTTACCTTATCACTTCTCTTTTTTTATCTTA TTTTTTTATTTTCACTTTTATTCTCTATCCTATTCGAGATATTATCCATCCTCACGCAACTGCTGACTATCTTGAAACAA TTTTACCGATTGGATTTAAAGGGCTAGTTGCGATGTTTCGTTACTGGACTTTTACTATTTTCTATGTGATGTCAGAACTT TGGGGAAGTACTGTTTTATTTGTCTTATTTTGGGGTTTTGCTAATCAAGTGACTAAAATTAGTGAGGCAAAAAGATTTTA CGGTCTGTTTGGGGTAGGTGCTAATCTTTCGGGTATTTTCGCAGGACAAGCTTCTGTGTACTGTTGTCAATTTAATAAGC AGAACGATTTGGGAATCCTTGGTAGTGATCCATGGTATCAATCATTAGTGATGATGGTTTCTTTAATTTTATTATCGGGT GCTTTAGTTTTAGCTTTATTTCGTTGGATGAATGTAGAAGTCTTAACCGATAAACGTTTTTATGATCCTTCTTCGGTTAA AACAGAAGGAGAAGCTAAAGGTAAGCTTTCTCTAAAGCAAAGCTTTTCCTATCTTCTTCGCTCTAATTACTTACTTTGTA TTGCTCTTATTGTTATTTCTTATAACCTAGTTATTAACCTCACAGAAGTTTTATGGAAACATCAAGTCCGAGAGCTATAT CCTGATCCTAATGATTATACTTTATATATGAATCATATCGTATCCATTATTGGGGTAGTAGCGACCTTAAGTTCCCTTTT CGTATCAGGAAATGCGATTCGCAAATTTGGGTGGACCACTACTGCTTTAATTACACCTATCATTTTAGCTGTAACAAGTT TGGGCTTTTTCTCCTTTTTCTTCCTTAAAAAGGCATCTCCCGAAATTTTCTTATCTTTTTCCGGAGTAACTCCTTTGGTT TTAGTGGTTTTCTTTGGAACTGCTCAAAACATATTGAGTCGAGGAGCTAAATACTCTGTATTTGATGCCACTAAAGAAAT GAGTTTTGTTCCTTTAAATCCTGAATCCAAACTCGTTGGAAAAGCGGCGATTGATGGAGTTTGTTCTCGCCTCGGAAAAT CGGGTGGATCTGTGGTTCATCAGAGCCTTCTACTTTTGTTTTCTACAATTAATGCAAGTGCCCCTTATGTAGCTATCGTC TTGTTCGCCGTAATTCTAGTCTGGGCAATGGCAATTCGCGTTTTAGGTAAACAATTTAATGAATTGACAAGTCAGGTAGA AAACAATGAAACTTCTGGGACATTGATGACTCCTATTCGAGCTGTTAATATTCTTTCAGACACAATTTTGAAAGAACAGA AAGCTGTATAA
Upstream 100 bases:
>100_bases AACCTGTAAATAAACTGAAAGGTTAGAAGCTTGCGAGTATCCTTATTTGTGAAACTTAAGGATAAAAAGTTGCCGATCTT AATCATAAGAAAAGGTTAGC
Downstream 100 bases:
>100_bases TTTTAAAATCAAAGCACATTAGTAGTATTTATTATTAATGTGCTTTTTATTTTTTTATTAATTAAATAAATAGTTGAGAA TTAATAAAAAATATAATATA
Product: ADP/ATP translocase
Products: NA
Alternate protein names: ADP/ATP translocase 1 [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MSQTPTGSREFSPWRSNLWPVHRYELKKLIPMLLIFFFISFDYNILRTLKDSLLITAKSSGAEVIPFVKVWAMFPGAILM TLLFTWLSNRLSREIVFYLITSLFLSYFFIFTFILYPIRDIIHPHATADYLETILPIGFKGLVAMFRYWTFTIFYVMSEL WGSTVLFVLFWGFANQVTKISEAKRFYGLFGVGANLSGIFAGQASVYCCQFNKQNDLGILGSDPWYQSLVMMVSLILLSG ALVLALFRWMNVEVLTDKRFYDPSSVKTEGEAKGKLSLKQSFSYLLRSNYLLCIALIVISYNLVINLTEVLWKHQVRELY PDPNDYTLYMNHIVSIIGVVATLSSLFVSGNAIRKFGWTTTALITPIILAVTSLGFFSFFFLKKASPEIFLSFSGVTPLV LVVFFGTAQNILSRGAKYSVFDATKEMSFVPLNPESKLVGKAAIDGVCSRLGKSGGSVVHQSLLLLFSTINASAPYVAIV LFAVILVWAMAIRVLGKQFNELTSQVENNETSGTLMTPIRAVNILSDTILKEQKAV
Sequences:
>Translated_536_residues MSQTPTGSREFSPWRSNLWPVHRYELKKLIPMLLIFFFISFDYNILRTLKDSLLITAKSSGAEVIPFVKVWAMFPGAILM TLLFTWLSNRLSREIVFYLITSLFLSYFFIFTFILYPIRDIIHPHATADYLETILPIGFKGLVAMFRYWTFTIFYVMSEL WGSTVLFVLFWGFANQVTKISEAKRFYGLFGVGANLSGIFAGQASVYCCQFNKQNDLGILGSDPWYQSLVMMVSLILLSG ALVLALFRWMNVEVLTDKRFYDPSSVKTEGEAKGKLSLKQSFSYLLRSNYLLCIALIVISYNLVINLTEVLWKHQVRELY PDPNDYTLYMNHIVSIIGVVATLSSLFVSGNAIRKFGWTTTALITPIILAVTSLGFFSFFFLKKASPEIFLSFSGVTPLV LVVFFGTAQNILSRGAKYSVFDATKEMSFVPLNPESKLVGKAAIDGVCSRLGKSGGSVVHQSLLLLFSTINASAPYVAIV LFAVILVWAMAIRVLGKQFNELTSQVENNETSGTLMTPIRAVNILSDTILKEQKAV >Mature_535_residues SQTPTGSREFSPWRSNLWPVHRYELKKLIPMLLIFFFISFDYNILRTLKDSLLITAKSSGAEVIPFVKVWAMFPGAILMT LLFTWLSNRLSREIVFYLITSLFLSYFFIFTFILYPIRDIIHPHATADYLETILPIGFKGLVAMFRYWTFTIFYVMSELW GSTVLFVLFWGFANQVTKISEAKRFYGLFGVGANLSGIFAGQASVYCCQFNKQNDLGILGSDPWYQSLVMMVSLILLSGA LVLALFRWMNVEVLTDKRFYDPSSVKTEGEAKGKLSLKQSFSYLLRSNYLLCIALIVISYNLVINLTEVLWKHQVRELYP DPNDYTLYMNHIVSIIGVVATLSSLFVSGNAIRKFGWTTTALITPIILAVTSLGFFSFFFLKKASPEIFLSFSGVTPLVL VVFFGTAQNILSRGAKYSVFDATKEMSFVPLNPESKLVGKAAIDGVCSRLGKSGGSVVHQSLLLLFSTINASAPYVAIVL FAVILVWAMAIRVLGKQFNELTSQVENNETSGTLMTPIRAVNILSDTILKEQKAV
Specific function: Unknown
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60268; Mature: 60137
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTPTGSREFSPWRSNLWPVHRYELKKLIPMLLIFFFISFDYNILRTLKDSLLITAKSS CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCC GAEVIPFVKVWAMFPGAILMTLLFTWLSNRLSREIVFYLITSLFLSYFFIFTFILYPIRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIHPHATADYLETILPIGFKGLVAMFRYWTFTIFYVMSELWGSTVLFVLFWGFANQVTKI HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEAKRFYGLFGVGANLSGIFAGQASVYCCQFNKQNDLGILGSDPWYQSLVMMVSLILLSG HHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVLALFRWMNVEVLTDKRFYDPSSVKTEGEAKGKLSLKQSFSYLLRSNYLLCIALIVIS HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH YNLVINLTEVLWKHQVRELYPDPNDYTLYMNHIVSIIGVVATLSSLFVSGNAIRKFGWTT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH TALITPIILAVTSLGFFSFFFLKKASPEIFLSFSGVTPLVLVVFFGTAQNILSRGAKYSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE FDATKEMSFVPLNPESKLVGKAAIDGVCSRLGKSGGSVVHQSLLLLFSTINASAPYVAIV EHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LFAVILVWAMAIRVLGKQFNELTSQVENNETSGTLMTPIRAVNILSDTILKEQKAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQTPTGSREFSPWRSNLWPVHRYELKKLIPMLLIFFFISFDYNILRTLKDSLLITAKSS CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCC GAEVIPFVKVWAMFPGAILMTLLFTWLSNRLSREIVFYLITSLFLSYFFIFTFILYPIRD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIHPHATADYLETILPIGFKGLVAMFRYWTFTIFYVMSELWGSTVLFVLFWGFANQVTKI HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEAKRFYGLFGVGANLSGIFAGQASVYCCQFNKQNDLGILGSDPWYQSLVMMVSLILLSG HHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVLALFRWMNVEVLTDKRFYDPSSVKTEGEAKGKLSLKQSFSYLLRSNYLLCIALIVIS HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH YNLVINLTEVLWKHQVRELYPDPNDYTLYMNHIVSIIGVVATLSSLFVSGNAIRKFGWTT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH TALITPIILAVTSLGFFSFFFLKKASPEIFLSFSGVTPLVLVVFFGTAQNILSRGAKYSV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEE FDATKEMSFVPLNPESKLVGKAAIDGVCSRLGKSGGSVVHQSLLLLFSTINASAPYVAIV EHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH LFAVILVWAMAIRVLGKQFNELTSQVENNETSGTLMTPIRAVNILSDTILKEQKAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]