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The map label for this gene is yscL [H]

Identifier: 46445837

GI number: 46445837

Start: 297925

End: 298596

Strand: Reverse

Name: yscL [H]

Synonym: pc0203

Alternate gene names: 46445837

Gene position: 298596-297925 (Counterclockwise)

Preceding gene: 46445838

Following gene: 46445836

Centisome position: 12.37

GC content: 35.57

Gene sequence:

>672_bases
GTGAGTAAAAAGTTTTTCACCTTAATTTATGGGGAACAGATTCACGCAGCCCCCAAAACAAAGATTATCCCAAGCGAATC
TTTTTCTAAACTTGCGGATGCCTCAAGTGTTTTAGAACACATTAAAGAAGACGCCGAAAAATATCGATTGCAAATCGCTA
AAGAATGCGAAGAAATTAAAGAACACGCAGAAAATTCAGGCTATGAAGAGGGATTCAAAAAGTGGGCTGAACATTTAGTC
AAACTGGAGAAGGAAATTGAAAAAGTTCACAAAGAATTACAGCAACTCGTTCTCCCTGTTGCATTGAAAGCAGCCAAAAA
AATCGTGAGTAAAGAAATTGAACTTTCTTCTGACATTATTTTAGATATTGTAGCAAATAATTTAAAAGCCGTTACCCAAC
ACAAACACGCAACTATCTATGTTAATAAAAAAGACCTCGATATTTTAGATAAAAACAAACCTCGCTTAAAAGAAATTTTT
GAGAGTTTAGAAAGTTTATCTATTCGTCCGAGAGATGACGTCAAGCCCGGTGGATGCATTATTGAAACCGAAATAGGAAT
TATTAATGCTCAGCTAGATCATCGTTGGCAGGTTTTAGAAAAAGCTTTTGAAAGTTTAGTCAAAATTCCTGTAGAACAAT
CTCCCATAGAACCTCCCGCACAAAGTAGTTAA

Upstream 100 bases:

>100_bases
TTATCTTGAATGCTTATCAAAAAGAAAGTATTGATAAGGTTACTCCTTTTTTAAAAGGACAAGTCATCAATCTTATGAAT
TTTTTTAAAAGTGAGTCCAT

Downstream 100 bases:

>100_bases
GGTATTTTCCATGTATAAATATAAACACATTTCCTTTAAATCCCTTCTTTGTTTGCTAGGGCTTCTCGTTTTATTTGGGC
TAGCACCAGATACTGTTTAT

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSKKFFTLIYGEQIHAAPKTKIIPSESFSKLADASSVLEHIKEDAEKYRLQIAKECEEIKEHAENSGYEEGFKKWAEHLV
KLEKEIEKVHKELQQLVLPVALKAAKKIVSKEIELSSDIILDIVANNLKAVTQHKHATIYVNKKDLDILDKNKPRLKEIF
ESLESLSIRPRDDVKPGGCIIETEIGIINAQLDHRWQVLEKAFESLVKIPVEQSPIEPPAQSS

Sequences:

>Translated_223_residues
MSKKFFTLIYGEQIHAAPKTKIIPSESFSKLADASSVLEHIKEDAEKYRLQIAKECEEIKEHAENSGYEEGFKKWAEHLV
KLEKEIEKVHKELQQLVLPVALKAAKKIVSKEIELSSDIILDIVANNLKAVTQHKHATIYVNKKDLDILDKNKPRLKEIF
ESLESLSIRPRDDVKPGGCIIETEIGIINAQLDHRWQVLEKAFESLVKIPVEQSPIEPPAQSS
>Mature_222_residues
SKKFFTLIYGEQIHAAPKTKIIPSESFSKLADASSVLEHIKEDAEKYRLQIAKECEEIKEHAENSGYEEGFKKWAEHLVK
LEKEIEKVHKELQQLVLPVALKAAKKIVSKEIELSSDIILDIVANNLKAVTQHKHATIYVNKKDLDILDKNKPRLKEIFE
SLESLSIRPRDDVKPGGCIIETEIGIINAQLDHRWQVLEKAFESLVKIPVEQSPIEPPAQSS

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 25352; Mature: 25220

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKFFTLIYGEQIHAAPKTKIIPSESFSKLADASSVLEHIKEDAEKYRLQIAKECEEIK
CCCCEEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHAENSGYEEGFKKWAEHLVKLEKEIEKVHKELQQLVLPVALKAAKKIVSKEIELSSDII
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDIVANNLKAVTQHKHATIYVNKKDLDILDKNKPRLKEIFESLESLSIRPRDDVKPGGCI
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
IETEIGIINAQLDHRWQVLEKAFESLVKIPVEQSPIEPPAQSS
EEECCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKFFTLIYGEQIHAAPKTKIIPSESFSKLADASSVLEHIKEDAEKYRLQIAKECEEIK
CCCEEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHAENSGYEEGFKKWAEHLVKLEKEIEKVHKELQQLVLPVALKAAKKIVSKEIELSSDII
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDIVANNLKAVTQHKHATIYVNKKDLDILDKNKPRLKEIFESLESLSIRPRDDVKPGGCI
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEE
IETEIGIINAQLDHRWQVLEKAFESLVKIPVEQSPIEPPAQSS
EEECCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]