Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445838

Identifier: 46445838

GI number: 46445838

Start: 298593

End: 299438

Strand: Reverse

Name: 46445838

Synonym: pc0204

Alternate gene names: NA

Gene position: 299438-298593 (Counterclockwise)

Preceding gene: 46445839

Following gene: 46445837

Centisome position: 12.4

GC content: 34.99

Gene sequence:

>846_bases
ATGGATAAAAGAGGCTGGATGATGATGCGTATTTTCATCAACCGATACCATCTCAAAGGGGGAGAGATATTATTAAAATA
TCTTTCCACAGAAGAAGCTCAGGCTTTGCAAAGTCAAACAATTCGTTCTACTGATTTAAGCCCTCTTCTTTATCAACCTC
AAAATTTGTTGAGAAGAATGCATTATTCATGGATTGCTCCCCTTCTTGAAAATTTTCCTGAACGTCTCTATCCTTTAGTT
AAAGCAGCTTTAACAAGTGAACAAGCGTCAGGCCTCCAAAACGCGCAATCACTTACCCTATCAAAACCCGTTAAAACATT
TATCATCAATCAACTTTATAGCTTTTTAAAAGCTGATGAGCGTCTCCCCTATGATTATCTCCCTGAGACAGATTTATCAG
AGCTTGGAACCTGGAATAAAGATAAATTGACACTTTTAATTGATTTTTTGGGCTTACATGATCTTGCCGTCGAAGTTCGA
CATATAGTAGATAAAAATCATCTAAAAAATATTTATGCCTGTTTGACCCCAAAACAATTCTATTATCTAAAAGTTTGTTT
ACATCAGAAAGAAGTTTTATCGGTTCCTAAACTTGGCATAGACCCTTCTCTGAAAGATTGTACTAAACTTAAACGTATTA
TCCATCAAAGAGGTCTTTTCCGTTTAAGCAAAGCTTTATGTGGGCAACATCCTGATTTTATTTGGTATCTTGCTCATACC
TTGGATACGGGTAGAGGAAAGCTTATCTTGAATGCTTATCAAAAAGAAAGTATTGATAAGGTTACTCCTTTTTTAAAAGG
ACAAGTCATCAATCTTATGAATTTTTTTAAAAGTGAGTCCATGTGA

Upstream 100 bases:

>100_bases
AACAAAAAAATGAGCAATCTAATAAAAAAGAGACAGAAGATAACACCCTAAATCAAGGAGTTGATGAAACCTAAGCGTTT
CATTGATTAAAAGGATTGTT

Downstream 100 bases:

>100_bases
GTAAAAAGTTTTTCACCTTAATTTATGGGGAACAGATTCACGCAGCCCCCAAAACAAAGATTATCCCAAGCGAATCTTTT
TCTAAACTTGCGGATGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDKRGWMMMRIFINRYHLKGGEILLKYLSTEEAQALQSQTIRSTDLSPLLYQPQNLLRRMHYSWIAPLLENFPERLYPLV
KAALTSEQASGLQNAQSLTLSKPVKTFIINQLYSFLKADERLPYDYLPETDLSELGTWNKDKLTLLIDFLGLHDLAVEVR
HIVDKNHLKNIYACLTPKQFYYLKVCLHQKEVLSVPKLGIDPSLKDCTKLKRIIHQRGLFRLSKALCGQHPDFIWYLAHT
LDTGRGKLILNAYQKESIDKVTPFLKGQVINLMNFFKSESM

Sequences:

>Translated_281_residues
MDKRGWMMMRIFINRYHLKGGEILLKYLSTEEAQALQSQTIRSTDLSPLLYQPQNLLRRMHYSWIAPLLENFPERLYPLV
KAALTSEQASGLQNAQSLTLSKPVKTFIINQLYSFLKADERLPYDYLPETDLSELGTWNKDKLTLLIDFLGLHDLAVEVR
HIVDKNHLKNIYACLTPKQFYYLKVCLHQKEVLSVPKLGIDPSLKDCTKLKRIIHQRGLFRLSKALCGQHPDFIWYLAHT
LDTGRGKLILNAYQKESIDKVTPFLKGQVINLMNFFKSESM
>Mature_281_residues
MDKRGWMMMRIFINRYHLKGGEILLKYLSTEEAQALQSQTIRSTDLSPLLYQPQNLLRRMHYSWIAPLLENFPERLYPLV
KAALTSEQASGLQNAQSLTLSKPVKTFIINQLYSFLKADERLPYDYLPETDLSELGTWNKDKLTLLIDFLGLHDLAVEVR
HIVDKNHLKNIYACLTPKQFYYLKVCLHQKEVLSVPKLGIDPSLKDCTKLKRIIHQRGLFRLSKALCGQHPDFIWYLAHT
LDTGRGKLILNAYQKESIDKVTPFLKGQVINLMNFFKSESM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32643; Mature: 32643

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA