Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445772

Identifier: 46445772

GI number: 46445772

Start: 211196

End: 212272

Strand: Direct

Name: 46445772

Synonym: pc0138

Alternate gene names: NA

Gene position: 211196-212272 (Clockwise)

Preceding gene: 161611310

Following gene: 46445774

Centisome position: 8.75

GC content: 40.02

Gene sequence:

>1077_bases
TTGTATACCAATGATACTGGTATTTTCCCTGCTTTGAACCAATCGGAAGAGTTTTTTGTTATCCATGAGCCTGATGGTAA
ATTAATCACCTATTACCATCCATCAGGGACTAACATTGTCATTAAAGAAATTAAGCAGCAGTCAGATAAACCTTGCGTAA
CTAGTCTATATTTAATTGAAGATCAAGGTATCTATGTAAAAACTGTCACTGATGCCAATTCCATTGAGACTTTAGAAAGA
GATGATAAAATCATTTTGGCTCTTCACGAAGCTATTTATGCCAATTCATGTGAAAAATTAGAGTTATTATCTTTAACTAA
AAATTTGGAAAAAGATCCAAAAACATTAGATAATGTTGTTAATCTTTTAAGAAATTCCTGTCATAGCAAAAAATGCCCTA
AAGGTCCTCCTGGACCTCAAGGAGCAACAGGTCCACAAGGCCCTCCGGGACCAACAGGTGAAGGTGCAGGTCTAACAGGA
CCAACTGGTTTAACGGGAGCCACAGGATTGACAGGAGCTACAGGATTAACTGGAGCGGATGGTTTCCCAGGAGCTGATGG
TATGTCAGGGTCTAAAGGTTTGACAGGAGCCACAGGTTTGACAGGAGCAACGGGATTAACTGGTGCTAGTGGACCAGCTT
TTGGCAATAATTATGTTTTTGCCTATGGAATAGAGACACAATCGGTAAATCCATCTCCAGTTAATTTGAGCTTTGATGTT
TGTCCAATTTTAGATGGTTGGGTGCGTCCAACTAACACAACGTTCACTTGTAAACAAACAGGAATTTATTTAGTTCAGGT
GAGAGGACAATTTACTCTAAATGTAATGGATGCCACATGCGCTCTTTGGGCAACCTTTAATGGCTCCCAAGTTGAAGGAA
GCCAGGTTTTTGGGGAATTGAGTGGAGAACTAACAGCAGACACCATTCCATTGACTACAAATTTTTTATTGAATGCGACA
AGTGGCCAAGATCTTATTATCCAAGCTGTCGCTAATCCTGGTGGCCAGTTTATCGCTCCAGTTGGGGAAGGTAGTCCTCC
AACAGCTTGTGCAATCACTATTATTAGGATTTTATAA

Upstream 100 bases:

>100_bases
GAACACCAAAAAATTCTTTTTCAAAATCCTGATCCTCTTTACTGGATTTTACCCGTTAGAAAATAGTGCACAAGCGCAGA
CCGATTTTTTTTATGAAGAT

Downstream 100 bases:

>100_bases
TTTAACTCCAAACTCAACATAACTGTTGAGTTTGGAAGCTAGCTATCAAAAATTTATAATTTTAAAAACTATTTAAAAAG
TACCTTTTATACGAAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MYTNDTGIFPALNQSEEFFVIHEPDGKLITYYHPSGTNIVIKEIKQQSDKPCVTSLYLIEDQGIYVKTVTDANSIETLER
DDKIILALHEAIYANSCEKLELLSLTKNLEKDPKTLDNVVNLLRNSCHSKKCPKGPPGPQGATGPQGPPGPTGEGAGLTG
PTGLTGATGLTGATGLTGADGFPGADGMSGSKGLTGATGLTGATGLTGASGPAFGNNYVFAYGIETQSVNPSPVNLSFDV
CPILDGWVRPTNTTFTCKQTGIYLVQVRGQFTLNVMDATCALWATFNGSQVEGSQVFGELSGELTADTIPLTTNFLLNAT
SGQDLIIQAVANPGGQFIAPVGEGSPPTACAITIIRIL

Sequences:

>Translated_358_residues
MYTNDTGIFPALNQSEEFFVIHEPDGKLITYYHPSGTNIVIKEIKQQSDKPCVTSLYLIEDQGIYVKTVTDANSIETLER
DDKIILALHEAIYANSCEKLELLSLTKNLEKDPKTLDNVVNLLRNSCHSKKCPKGPPGPQGATGPQGPPGPTGEGAGLTG
PTGLTGATGLTGATGLTGADGFPGADGMSGSKGLTGATGLTGATGLTGASGPAFGNNYVFAYGIETQSVNPSPVNLSFDV
CPILDGWVRPTNTTFTCKQTGIYLVQVRGQFTLNVMDATCALWATFNGSQVEGSQVFGELSGELTADTIPLTTNFLLNAT
SGQDLIIQAVANPGGQFIAPVGEGSPPTACAITIIRIL
>Mature_358_residues
MYTNDTGIFPALNQSEEFFVIHEPDGKLITYYHPSGTNIVIKEIKQQSDKPCVTSLYLIEDQGIYVKTVTDANSIETLER
DDKIILALHEAIYANSCEKLELLSLTKNLEKDPKTLDNVVNLLRNSCHSKKCPKGPPGPQGATGPQGPPGPTGEGAGLTG
PTGLTGATGLTGATGLTGADGFPGADGMSGSKGLTGATGLTGATGLTGASGPAFGNNYVFAYGIETQSVNPSPVNLSFDV
CPILDGWVRPTNTTFTCKQTGIYLVQVRGQFTLNVMDATCALWATFNGSQVEGSQVFGELSGELTADTIPLTTNFLLNAT
SGQDLIIQAVANPGGQFIAPVGEGSPPTACAITIIRIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37332; Mature: 37332

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTNDTGIFPALNQSEEFFVIHEPDGKLITYYHPSGTNIVIKEIKQQSDKPCVTSLYLIE
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEHHHHCCCCCCEEEEEEEE
DQGIYVKTVTDANSIETLERDDKIILALHEAIYANSCEKLELLSLTKNLEKDPKTLDNVV
CCCEEEEEECCCCHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
NLLRNSCHSKKCPKGPPGPQGATGPQGPPGPTGEGAGLTGPTGLTGATGLTGATGLTGAD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFPGADGMSGSKGLTGATGLTGATGLTGASGPAFGNNYVFAYGIETQSVNPSPVNLSFDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEE
CPILDGWVRPTNTTFTCKQTGIYLVQVRGQFTLNVMDATCALWATFNGSQVEGSQVFGEL
CCCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEEEECEEEEEEECCCCCCCHHHHHHHH
SGELTADTIPLTTNFLLNATSGQDLIIQAVANPGGQFIAPVGEGSPPTACAITIIRIL
CCCEEECEECEEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCHHHEEEEEEEC
>Mature Secondary Structure
MYTNDTGIFPALNQSEEFFVIHEPDGKLITYYHPSGTNIVIKEIKQQSDKPCVTSLYLIE
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEHHHHCCCCCCEEEEEEEE
DQGIYVKTVTDANSIETLERDDKIILALHEAIYANSCEKLELLSLTKNLEKDPKTLDNVV
CCCEEEEEECCCCHHHHHCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
NLLRNSCHSKKCPKGPPGPQGATGPQGPPGPTGEGAGLTGPTGLTGATGLTGATGLTGAD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFPGADGMSGSKGLTGATGLTGATGLTGASGPAFGNNYVFAYGIETQSVNPSPVNLSFDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEE
CPILDGWVRPTNTTFTCKQTGIYLVQVRGQFTLNVMDATCALWATFNGSQVEGSQVFGEL
CCCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEEEECEEEEEEECCCCCCCHHHHHHHH
SGELTADTIPLTTNFLLNATSGQDLIIQAVANPGGQFIAPVGEGSPPTACAITIIRIL
CCCEEECEECEEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA