| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445746
Identifier: 46445746
GI number: 46445746
Start: 180908
End: 181120
Strand: Reverse
Name: 46445746
Synonym: pc0112
Alternate gene names: NA
Gene position: 181120-180908 (Counterclockwise)
Preceding gene: 46445747
Following gene: 46445745
Centisome position: 7.5
GC content: 25.82
Gene sequence:
>213_bases TTGAGTAATCATCCAAGTTTTAAATTTAATTGTGCGATCAGTCCTCAAAAATTGATTGATCACTTTTTCACAACTTTAAT TTTCTTAACTGACTTATATTTAAATAATTATGATAAAATCCCTCAAAAGTTGCTAATTACTTCGCTATCAAGACTTTCAA ATCATCTTACTTTTTTTTCATTTATTCGAAATGCTTCAATATCAACAGCTTAA
Upstream 100 bases:
>100_bases GAAAAATCTATTCATATTCTTATCCATCAACGGTCAAATAAAGAATTACTCCATCCTTTCAATTCCAATGATCCTGCTCT AAAAATTTTATTACAAATTT
Downstream 100 bases:
>100_bases AAAAGGCTTCAGAAGACACTCTGAATAGGTTAAAATAAATTCTGTATCTTGACTTTATAGTTGAAAAAATAGATAACAAA AGCAGTTTTACTACAACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSNHPSFKFNCAISPQKLIDHFFTTLIFLTDLYLNNYDKIPQKLLITSLSRLSNHLTFFSFIRNASISTA
Sequences:
>Translated_70_residues MSNHPSFKFNCAISPQKLIDHFFTTLIFLTDLYLNNYDKIPQKLLITSLSRLSNHLTFFSFIRNASISTA >Mature_69_residues SNHPSFKFNCAISPQKLIDHFFTTLIFLTDLYLNNYDKIPQKLLITSLSRLSNHLTFFSFIRNASISTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8097; Mature: 7966
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHPSFKFNCAISPQKLIDHFFTTLIFLTDLYLNNYDKIPQKLLITSLSRLSNHLTFFS CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FIRNASISTA HHHCCCCCCC >Mature Secondary Structure SNHPSFKFNCAISPQKLIDHFFTTLIFLTDLYLNNYDKIPQKLLITSLSRLSNHLTFFS CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH FIRNASISTA HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA