Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445747

Identifier: 46445747

GI number: 46445747

Start: 181113

End: 182096

Strand: Reverse

Name: 46445747

Synonym: pc0113

Alternate gene names: NA

Gene position: 182096-181113 (Counterclockwise)

Preceding gene: 46445748

Following gene: 46445746

Centisome position: 7.54

GC content: 31.81

Gene sequence:

>984_bases
ATGACAGCAATAGAAAGACGCGCATTATATAATCTATTACGTATGAACTGGCTTAATAATCCTCAGATGAAAGTCGATCA
TTGGCAAGTAGACGATTATCGCATTTTTTCAACTGAAACATTATTTGAACGATTAAAGAAATTAAACATTAATCTCGATA
AAAGTAGTTTTATTGCTTATGCCGATGAGTGCGAATCGCCCGAAGATTTGACAGAACAATTAGTGGGAGATCGGGAGCTT
AAAGCTCAAAACGAAGATCAGGTTTATTTATTAATTTTTGAGCTTTGGAGAAGGCTTTTAAGTGAAAAACCTTCTTTATC
AATTATATGTAATGAGCTTGATCAACTCATTTATCAATATGATCAAGGAAAAGTTGAAAACTCTACGTTACTACAAGATC
AACTAAATCAATTTATTACTCTTTTAGATGAAAATGCAGATCAAGGAATTCCTCCTCAAGAAGTTTTTACCGGAGTTTCT
ACCTATTGTGCAAATGACATTGAAACTTTCCTTTACGATTTTATTTCTGAAAGAATTGAAGAAGAAAATGAAGCTTATGC
TTTAGATTTATTAGACGATTTTTCTACCTATTTAGGAACCAATAAGTGGTTTGATTTATTGCGGGCAAGACTTTCGAGTC
TTTCTAATCGAAAAATCGCAACTAAACAACTTTCTCAACTTTTAGAAGATTATTTAGATAAGCAAGATCTTGAGTTTAAC
TTAGAGCTGCTTTCATTTATGACAGAAATTGGGGATCCATATACATTTAAAGAAGTTTTACAAAGCACGCTTCCTCTTTT
GCAGACGGAAGAAGATTTTCAAGATTTTTTATTTATCTGTGCAGACTATTGTCACCGACTCGATCAAGAAAACAAAGAAA
AATCTATTCATATTCTTATCCATCAACGGTCAAATAAAGAATTACTCCATCCTTTCAATTCCAATGATCCTGCTCTAAAA
ATTTTATTACAAATTTTTGAGTAA

Upstream 100 bases:

>100_bases
ATTATTTTATACTTAGTCTTAAAATAATCTAAAAACTTTTCATATCGAAAAATGAATCTTTTTAATTTCAATTTCTTCAC
ATTTTAAATTAATTAATCAT

Downstream 100 bases:

>100_bases
TCATCCAAGTTTTAAATTTAATTGTGCGATCAGTCCTCAAAAATTGATTGATCACTTTTTCACAACTTTAATTTTCTTAA
CTGACTTATATTTAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDREL
KAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVS
TYCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN
LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALK
ILLQIFE

Sequences:

>Translated_327_residues
MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDREL
KAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVS
TYCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN
LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALK
ILLQIFE
>Mature_326_residues
TAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDRELK
AQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVST
YCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFNL
ELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALKI
LLQIFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38619; Mature: 38488

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAY
CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHHHHH
ADECESPEDLTEQLVGDRELKAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQY
HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVSTYCANDIETFLYDFISERIE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN
CCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH
LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILI
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
HQRSNKELLHPFNSNDPALKILLQIFE
EECCCCHHCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
TAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAY
CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHHHHH
ADECESPEDLTEQLVGDRELKAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQY
HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
DQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVSTYCANDIETFLYDFISERIE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN
CCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH
LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILI
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
HQRSNKELLHPFNSNDPALKILLQIFE
EECCCCHHCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA