| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445747
Identifier: 46445747
GI number: 46445747
Start: 181113
End: 182096
Strand: Reverse
Name: 46445747
Synonym: pc0113
Alternate gene names: NA
Gene position: 182096-181113 (Counterclockwise)
Preceding gene: 46445748
Following gene: 46445746
Centisome position: 7.54
GC content: 31.81
Gene sequence:
>984_bases ATGACAGCAATAGAAAGACGCGCATTATATAATCTATTACGTATGAACTGGCTTAATAATCCTCAGATGAAAGTCGATCA TTGGCAAGTAGACGATTATCGCATTTTTTCAACTGAAACATTATTTGAACGATTAAAGAAATTAAACATTAATCTCGATA AAAGTAGTTTTATTGCTTATGCCGATGAGTGCGAATCGCCCGAAGATTTGACAGAACAATTAGTGGGAGATCGGGAGCTT AAAGCTCAAAACGAAGATCAGGTTTATTTATTAATTTTTGAGCTTTGGAGAAGGCTTTTAAGTGAAAAACCTTCTTTATC AATTATATGTAATGAGCTTGATCAACTCATTTATCAATATGATCAAGGAAAAGTTGAAAACTCTACGTTACTACAAGATC AACTAAATCAATTTATTACTCTTTTAGATGAAAATGCAGATCAAGGAATTCCTCCTCAAGAAGTTTTTACCGGAGTTTCT ACCTATTGTGCAAATGACATTGAAACTTTCCTTTACGATTTTATTTCTGAAAGAATTGAAGAAGAAAATGAAGCTTATGC TTTAGATTTATTAGACGATTTTTCTACCTATTTAGGAACCAATAAGTGGTTTGATTTATTGCGGGCAAGACTTTCGAGTC TTTCTAATCGAAAAATCGCAACTAAACAACTTTCTCAACTTTTAGAAGATTATTTAGATAAGCAAGATCTTGAGTTTAAC TTAGAGCTGCTTTCATTTATGACAGAAATTGGGGATCCATATACATTTAAAGAAGTTTTACAAAGCACGCTTCCTCTTTT GCAGACGGAAGAAGATTTTCAAGATTTTTTATTTATCTGTGCAGACTATTGTCACCGACTCGATCAAGAAAACAAAGAAA AATCTATTCATATTCTTATCCATCAACGGTCAAATAAAGAATTACTCCATCCTTTCAATTCCAATGATCCTGCTCTAAAA ATTTTATTACAAATTTTTGAGTAA
Upstream 100 bases:
>100_bases ATTATTTTATACTTAGTCTTAAAATAATCTAAAAACTTTTCATATCGAAAAATGAATCTTTTTAATTTCAATTTCTTCAC ATTTTAAATTAATTAATCAT
Downstream 100 bases:
>100_bases TCATCCAAGTTTTAAATTTAATTGTGCGATCAGTCCTCAAAAATTGATTGATCACTTTTTCACAACTTTAATTTTCTTAA CTGACTTATATTTAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDREL KAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVS TYCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALK ILLQIFE
Sequences:
>Translated_327_residues MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDREL KAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVS TYCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALK ILLQIFE >Mature_326_residues TAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAYADECESPEDLTEQLVGDRELK AQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQYDQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVST YCANDIETFLYDFISERIEEENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFNL ELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILIHQRSNKELLHPFNSNDPALKI LLQIFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38619; Mature: 38488
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAY CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHHHHH ADECESPEDLTEQLVGDRELKAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQY HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVSTYCANDIETFLYDFISERIE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN CCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE HQRSNKELLHPFNSNDPALKILLQIFE EECCCCHHCCCCCCCCHHHHHHHHHHC >Mature Secondary Structure TAIERRALYNLLRMNWLNNPQMKVDHWQVDDYRIFSTETLFERLKKLNINLDKSSFIAY CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCHHHHHHH ADECESPEDLTEQLVGDRELKAQNEDQVYLLIFELWRRLLSEKPSLSIICNELDQLIYQY HHHCCCHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DQGKVENSTLLQDQLNQFITLLDENADQGIPPQEVFTGVSTYCANDIETFLYDFISERIE CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EENEAYALDLLDDFSTYLGTNKWFDLLRARLSSLSNRKIATKQLSQLLEDYLDKQDLEFN CCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHH LELLSFMTEIGDPYTFKEVLQSTLPLLQTEEDFQDFLFICADYCHRLDQENKEKSIHILI HHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE HQRSNKELLHPFNSNDPALKILLQIFE EECCCCHHCCCCCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA