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The map label for this gene is nrdD [H]

Identifier: 46445745

GI number: 46445745

Start: 178729

End: 180741

Strand: Reverse

Name: nrdD [H]

Synonym: pc0111

Alternate gene names: 46445745

Gene position: 180741-178729 (Counterclockwise)

Preceding gene: 46445746

Following gene: 46445742

Centisome position: 7.49

GC content: 40.24

Gene sequence:

>2013_bases
ATGACCAAACCAACAGCTCGAGCGATGGCTACCGCTTTACGCACTTATCATCGCCCCGTCAAAGAAGGGGATACACAACT
AGAAAATTGGGATCAGGTTGTTGAACGCGTTATTTCTCACCAACGATGGTTATGGGAACGAGCACTAGGGCGCACTCTTA
ACGAAGCTCAAGAGGACGAATTAGAAGAAATTCGCTCTCTCATTTCAAACCGACAAATCGCACCTGCGGGCCGTACTTTG
TGGTTAGGTGGGACTGAGCTAAGTCGCACGCGCGAATCTAGCATGTTTAATTGCTCATATACACATGTCGAAACAGTTTA
TGATGTAGTGGATGTTTTATGGTTGCTCCTTCAAGGTTGTGGTGTTGGATTTAGACCAATTACAGGAACTTTAAATGGTT
TTAGAAGACCTCTTCAAGAAATCAAAGTTATTCGTTCAAATCGAACTGAAAAAGGCGGTATTCAAAATAACGTTGAAACT
TATGATCCAGAAACACATATATGGACGATTAAAGTTGGAGATTCTGCCATTGCTTGGGCAAAAGCTGTCGGTAAATTGGT
AGCTGGTAAATTTCCTGCTCAAACTCTTGTTCTCGATTTTTCAGAAATCCGTCCGGCGGGAACCCGTTTAAAAGGTTATG
GTTGGATTTCTTCTGGAGATGAACAAATTGCTAAAGCTTTTAAAGCTATTGCGAAAATTTTATCTGATCGATCGGATCAA
TTATTGACCCGCATGGATATCCTCGATATTGTCAATTGGCTGGGAACTATTTTATCTAGCCGCCGCTCAGCCCAAATTGC
TTTATTTGAATACGATCAACCAGAATGGGAAGATTTTGCCATCGCTAAAAAAGAATGGTGGATAAAAGGCAATGCTCATC
GTCAACAATCTAATAATAGCCTTCTTTTCCGCTCAAAACCAAATCGAGAAGAATTAGAAAGAGTCTTTCAATTAATGTTG
GATTCAGGAGGATCTGAACCTGGTATTATTAACGCCGCAGAAGCTGAAAGAAGAGCACCCTGGTTTAAAGGATGCAATCC
TTGCGTCGAAATACTTTTGGGTAACAAAAGTTTTTGTAATTTGACAGAAGTCAACGTATTAGCTTTTAGAGGAGATAAAG
TTGGATTAGAAAGAGCTCTTTACCTTGCTGGTCGTATGAACTACCGCCAAACGATGGTTAACCTACGAGACGAAATTTTA
CAAGAAGCTTGGCACCTTAATAATGACTTCTTACATCTTTGTGGGGTAGGATTAACTGGTGTAAGGGCACGTCCTGATTT
GACAGCTTATGATTTTAAACGAATGCGTAATATTACAGTTAGTGCTGCATACAGCATGGCGAATGAACTCAATTCCCCCT
TACCAAAAAATGTGACTTGTATCAAACCCAGTGGAACCATAAGCAAAATCATGGGAACAGAAGAATGGGGAGAAGTACCT
GAAGGTATTCACATGCCACTTGGAAAGTATTTATTTAATAACATCACTTACTCTAAGCATGACCCTCTAGTCACAAAATT
CCGCGCAGCCGGTTATACCGTTATTGAAAAACCCTATGAACCAGAATCTGTGTTAGTCAAATTTCCCGTTAAATTTGAAA
ATGTGCCTTTCACACGCACAACGGTGACAAGAAAAAATGGAAAAATAGAAGAAGTAGAAATCAATACCGATTCAGCTGTA
GCTCAGCTAGAACTATACAGCATTCTTCAAACGACTTGGTGCGAACAAAACGTTTCGAACACCATTTCTTATGATCCCTC
TGAAGTTCCCGCCATTATTGACTGGTTCATGAAAAATTGGGACTGCTACGTTGGAGTGTCATTCTTATTTAGAAACGATC
CAACTAAAAATGCTGAAGATTTAGGCTATGCTTATCTGCCTCAAGAAGTTGTTACAAAAGAAGCATATGAAACGTATTGC
GCAAAATTGTCAGATATTGATTACTCCGGTATTCATATTCGCGATGATGATTTAGCCGAAGCCTGTGCTAATGGCGCCTG
CCCTATTCGATAA

Upstream 100 bases:

>100_bases
AAATAGATAACAAAAGCAGTTTTACTACAACCCGTTGTAATTTTCTGAGTAAGCAACTACAAGATCTTGTATTAATAATT
AAAAGAGATAGAGGACCACT

Downstream 100 bases:

>100_bases
TATTCTTTTAGACGATGCTGCTGCAAAACCAGCATCGTCTATCGATATATAAACAAAAGAAAGAAAAAGCCGATATTATT
TTAAGTTTTAGTCTAATTTG

Product: putative ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: RTPR [H]

Number of amino acids: Translated: 670; Mature: 669

Protein sequence:

>670_residues
MTKPTARAMATALRTYHRPVKEGDTQLENWDQVVERVISHQRWLWERALGRTLNEAQEDELEEIRSLISNRQIAPAGRTL
WLGGTELSRTRESSMFNCSYTHVETVYDVVDVLWLLLQGCGVGFRPITGTLNGFRRPLQEIKVIRSNRTEKGGIQNNVET
YDPETHIWTIKVGDSAIAWAKAVGKLVAGKFPAQTLVLDFSEIRPAGTRLKGYGWISSGDEQIAKAFKAIAKILSDRSDQ
LLTRMDILDIVNWLGTILSSRRSAQIALFEYDQPEWEDFAIAKKEWWIKGNAHRQQSNNSLLFRSKPNREELERVFQLML
DSGGSEPGIINAAEAERRAPWFKGCNPCVEILLGNKSFCNLTEVNVLAFRGDKVGLERALYLAGRMNYRQTMVNLRDEIL
QEAWHLNNDFLHLCGVGLTGVRARPDLTAYDFKRMRNITVSAAYSMANELNSPLPKNVTCIKPSGTISKIMGTEEWGEVP
EGIHMPLGKYLFNNITYSKHDPLVTKFRAAGYTVIEKPYEPESVLVKFPVKFENVPFTRTTVTRKNGKIEEVEINTDSAV
AQLELYSILQTTWCEQNVSNTISYDPSEVPAIIDWFMKNWDCYVGVSFLFRNDPTKNAEDLGYAYLPQEVVTKEAYETYC
AKLSDIDYSGIHIRDDDLAEACANGACPIR

Sequences:

>Translated_670_residues
MTKPTARAMATALRTYHRPVKEGDTQLENWDQVVERVISHQRWLWERALGRTLNEAQEDELEEIRSLISNRQIAPAGRTL
WLGGTELSRTRESSMFNCSYTHVETVYDVVDVLWLLLQGCGVGFRPITGTLNGFRRPLQEIKVIRSNRTEKGGIQNNVET
YDPETHIWTIKVGDSAIAWAKAVGKLVAGKFPAQTLVLDFSEIRPAGTRLKGYGWISSGDEQIAKAFKAIAKILSDRSDQ
LLTRMDILDIVNWLGTILSSRRSAQIALFEYDQPEWEDFAIAKKEWWIKGNAHRQQSNNSLLFRSKPNREELERVFQLML
DSGGSEPGIINAAEAERRAPWFKGCNPCVEILLGNKSFCNLTEVNVLAFRGDKVGLERALYLAGRMNYRQTMVNLRDEIL
QEAWHLNNDFLHLCGVGLTGVRARPDLTAYDFKRMRNITVSAAYSMANELNSPLPKNVTCIKPSGTISKIMGTEEWGEVP
EGIHMPLGKYLFNNITYSKHDPLVTKFRAAGYTVIEKPYEPESVLVKFPVKFENVPFTRTTVTRKNGKIEEVEINTDSAV
AQLELYSILQTTWCEQNVSNTISYDPSEVPAIIDWFMKNWDCYVGVSFLFRNDPTKNAEDLGYAYLPQEVVTKEAYETYC
AKLSDIDYSGIHIRDDDLAEACANGACPIR
>Mature_669_residues
TKPTARAMATALRTYHRPVKEGDTQLENWDQVVERVISHQRWLWERALGRTLNEAQEDELEEIRSLISNRQIAPAGRTLW
LGGTELSRTRESSMFNCSYTHVETVYDVVDVLWLLLQGCGVGFRPITGTLNGFRRPLQEIKVIRSNRTEKGGIQNNVETY
DPETHIWTIKVGDSAIAWAKAVGKLVAGKFPAQTLVLDFSEIRPAGTRLKGYGWISSGDEQIAKAFKAIAKILSDRSDQL
LTRMDILDIVNWLGTILSSRRSAQIALFEYDQPEWEDFAIAKKEWWIKGNAHRQQSNNSLLFRSKPNREELERVFQLMLD
SGGSEPGIINAAEAERRAPWFKGCNPCVEILLGNKSFCNLTEVNVLAFRGDKVGLERALYLAGRMNYRQTMVNLRDEILQ
EAWHLNNDFLHLCGVGLTGVRARPDLTAYDFKRMRNITVSAAYSMANELNSPLPKNVTCIKPSGTISKIMGTEEWGEVPE
GIHMPLGKYLFNNITYSKHDPLVTKFRAAGYTVIEKPYEPESVLVKFPVKFENVPFTRTTVTRKNGKIEEVEINTDSAVA
QLELYSILQTTWCEQNVSNTISYDPSEVPAIIDWFMKNWDCYVGVSFLFRNDPTKNAEDLGYAYLPQEVVTKEAYETYCA
KLSDIDYSGIHIRDDDLAEACANGACPIR

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II ribonucleoside-triphosphate reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000788
- InterPro:   IPR013345 [H]

Pfam domain/function: PF02867 Ribonuc_red_lgC [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 75967; Mature: 75836

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPTARAMATALRTYHRPVKEGDTQLENWDQVVERVISHQRWLWERALGRTLNEAQEDE
CCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEIRSLISNRQIAPAGRTLWLGGTELSRTRESSMFNCSYTHVETVYDVVDVLWLLLQGC
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GVGFRPITGTLNGFRRPLQEIKVIRSNRTEKGGIQNNVETYDPETHIWTIKVGDSAIAWA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
KAVGKLVAGKFPAQTLVLDFSEIRPAGTRLKGYGWISSGDEQIAKAFKAIAKILSDRSDQ
HHHHHHHHCCCCCHHEEEEHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHH
LLTRMDILDIVNWLGTILSSRRSAQIALFEYDQPEWEDFAIAKKEWWIKGNAHRQQSNNS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEECHHEEECCCCCCCCCCCC
LLFRSKPNREELERVFQLMLDSGGSEPGIINAAEAERRAPWFKGCNPCVEILLGNKSFCN
EEEECCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHCCCCCCCCCHHHHHHCCCCCCCC
LTEVNVLAFRGDKVGLERALYLAGRMNYRQTMVNLRDEILQEAWHLNNDFLHLCGVGLTG
EEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
VRARPDLTAYDFKRMRNITVSAAYSMANELNSPLPKNVTCIKPSGTISKIMGTEEWGEVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCHHHCCCC
EGIHMPLGKYLFNNITYSKHDPLVTKFRAAGYTVIEKPYEPESVLVKFPVKFENVPFTRT
CCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEEECEEECCCCCEEE
TVTRKNGKIEEVEINTDSAVAQLELYSILQTTWCEQNVSNTISYDPSEVPAIIDWFMKNW
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
DCYVGVSFLFRNDPTKNAEDLGYAYLPQEVVTKEAYETYCAKLSDIDYSGIHIRDDDLAE
CCEEEEEEEEECCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHH
ACANGACPIR
HHCCCCCCCC
>Mature Secondary Structure 
TKPTARAMATALRTYHRPVKEGDTQLENWDQVVERVISHQRWLWERALGRTLNEAQEDE
CCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEIRSLISNRQIAPAGRTLWLGGTELSRTRESSMFNCSYTHVETVYDVVDVLWLLLQGC
HHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GVGFRPITGTLNGFRRPLQEIKVIRSNRTEKGGIQNNVETYDPETHIWTIKVGDSAIAWA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHH
KAVGKLVAGKFPAQTLVLDFSEIRPAGTRLKGYGWISSGDEQIAKAFKAIAKILSDRSDQ
HHHHHHHHCCCCCHHEEEEHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHH
LLTRMDILDIVNWLGTILSSRRSAQIALFEYDQPEWEDFAIAKKEWWIKGNAHRQQSNNS
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEECHHEEECCCCCCCCCCCC
LLFRSKPNREELERVFQLMLDSGGSEPGIINAAEAERRAPWFKGCNPCVEILLGNKSFCN
EEEECCCCHHHHHHHHHHHHHCCCCCCCEEECHHHHHCCCCCCCCCHHHHHHCCCCCCCC
LTEVNVLAFRGDKVGLERALYLAGRMNYRQTMVNLRDEILQEAWHLNNDFLHLCGVGLTG
EEEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
VRARPDLTAYDFKRMRNITVSAAYSMANELNSPLPKNVTCIKPSGTISKIMGTEEWGEVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCCHHHCCCC
EGIHMPLGKYLFNNITYSKHDPLVTKFRAAGYTVIEKPYEPESVLVKFPVKFENVPFTRT
CCCCCCHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEEECEEECCCCCEEE
TVTRKNGKIEEVEINTDSAVAQLELYSILQTTWCEQNVSNTISYDPSEVPAIIDWFMKNW
EEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
DCYVGVSFLFRNDPTKNAEDLGYAYLPQEVVTKEAYETYCAKLSDIDYSGIHIRDDDLAE
CCEEEEEEEEECCCCCCHHHCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHH
ACANGACPIR
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA