Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

Click here to switch to the map view.

The map label for this gene is 46445724

Identifier: 46445724

GI number: 46445724

Start: 151176

End: 151373

Strand: Direct

Name: 46445724

Synonym: pc0090

Alternate gene names: NA

Gene position: 151176-151373 (Clockwise)

Preceding gene: 46445723

Following gene: 46445726

Centisome position: 6.26

GC content: 38.89

Gene sequence:

>198_bases
GTGTTTCAAAGGAGATTGAAGATGAACGTGAGTCAGCTCTGTTGCGATAATGGCTTCATGGACTTGAACATTAGTAAAAT
GTGTTTCTTGTTTATTGTAAAGTCGAATTTGCCTATCTGGGCTCCATCCACACCCTTTAATCCATTTTCCTCGATATTCA
TTGCGTCTGGGAAACGAATACACATGTTTGGATTTTAG

Upstream 100 bases:

>100_bases
TCACAAATGAAGAAGATTTGCGTCCTTTATATTGTTCTGCAAACAAAGTAGAATAGGATTGCATTTTAGAGAGAAAGTCA
GATATTTGATCATATGAGTA

Downstream 100 bases:

>100_bases
CTGTAATTCGGAAATTTCAATCGCTAACTCTCTTGTGACAACTTCATCACTATCTATTGATAAAATCCAATCATTTTTAG
CTAGGTTTGAAGCTGTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MFQRRLKMNVSQLCCDNGFMDLNISKMCFLFIVKSNLPIWAPSTPFNPFSSIFIASGKRIHMFGF

Sequences:

>Translated_65_residues
MFQRRLKMNVSQLCCDNGFMDLNISKMCFLFIVKSNLPIWAPSTPFNPFSSIFIASGKRIHMFGF
>Mature_65_residues
MFQRRLKMNVSQLCCDNGFMDLNISKMCFLFIVKSNLPIWAPSTPFNPFSSIFIASGKRIHMFGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7525; Mature: 7525

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
12.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
12.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQRRLKMNVSQLCCDNGFMDLNISKMCFLFIVKSNLPIWAPSTPFNPFSSIFIASGKRI
CCCCHHHCCHHHHHCCCCEEECCHHHEEEEEEECCCCCEECCCCCCCCCCEEEECCCCEE
HMFGF
EEECC
>Mature Secondary Structure
MFQRRLKMNVSQLCCDNGFMDLNISKMCFLFIVKSNLPIWAPSTPFNPFSSIFIASGKRI
CCCCHHHCCHHHHHCCCCEEECCHHHEEEEEEECCCCCEECCCCCCCCCCEEEECCCCEE
HMFGF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA