Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445662

Identifier: 46445662

GI number: 46445662

Start: 43555

End: 43917

Strand: Direct

Name: 46445662

Synonym: pc0028

Alternate gene names: NA

Gene position: 43555-43917 (Clockwise)

Preceding gene: 46445661

Following gene: 46445667

Centisome position: 1.8

GC content: 31.13

Gene sequence:

>363_bases
ATGCTCTTAACAAGCACTTTCTTAAATTTTTCAGTGAATCAACCAAAATTTTTATCTGATTTTGTTAACAGATCGAAAGA
CTATTTCAAGTTTGATTTAGCTAACCGTGTGAAGCAAATTGCAAAAGAGATTTTTTCAAAATTTTCTGAGACAATACAAA
AAAATAATAATAACAATCAACGTTCCAATCAAAATAGCGTCAAAGGAATTTCGATGCTTTTTTGCGTAACAATAATTTTA
TTACTTTTTAATTCTTTTTTTCGCCGCTCAGACTCTTCATTTCCTCTACCTACTCCAAAGATGAGATGTGACGATAATCT
ACCTAGTGGAAAAATTAATAAGCGCAGAGCGGCACAGATTTAG

Upstream 100 bases:

>100_bases
CAGCAATTGAATGAGATTTTTGGTAAATAAAAAAAGCAGGGTCTTATTGTAATAAATAAAAGATATTGATATAGTTTTTA
TTAACTAGTAAGGTGGTTAT

Downstream 100 bases:

>100_bases
ATTAAACCCAATAGTTTAAGGATGGCTATTACTCCTACGGGCACGCCTAAAATCCAAAGAAGTGCCATTCTTCCTAATCC
CATATCTATTCTCCTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL
LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI

Sequences:

>Translated_120_residues
MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL
LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI
>Mature_120_residues
MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQRSNQNSVKGISMLFCVTIIL
LLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13923; Mature: 13923

Theoretical pI: Translated: 11.02; Mature: 11.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQ
CCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RSNQNSVKGISMLFCVTIILLLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MLLTSTFLNFSVNQPKFLSDFVNRSKDYFKFDLANRVKQIAKEIFSKFSETIQKNNNNNQ
CCCCCCHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RSNQNSVKGISMLFCVTIILLLFNSFFRRSDSSFPLPTPKMRCDDNLPSGKINKRRAAQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA