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The map label for this gene is 45658770

Identifier: 45658770

GI number: 45658770

Start: 3572072

End: 3572740

Strand: Reverse

Name: 45658770

Synonym: LIC12942

Alternate gene names: NA

Gene position: 3572740-3572072 (Counterclockwise)

Preceding gene: 45658771

Following gene: 45658769

Centisome position: 83.53

GC content: 34.98

Gene sequence:

>669_bases
ATGACTTTTCGTCTTTCTAAAGAAGAAATCGAAAAACAGATTCGGTCTATGCTTTCTCAGGGATTGACTGGAACGGTGAA
CGATTTTTTTTCTTGGATTCGGATGGATACTATCCGCAAATTCAAAGACGAACCCGATCTTGAAAATACAATCGTAGAAA
ACATTCTGGAAAGTTTTGTAGAATCCAGTTATGTGAAACGAAGTAAGTTTAACTCTAAAGAATTTCATATTCATCCGGAT
GTCATTCAAGATAAAAAATTTCCACCTAAGGAATGTTATACTCTGCTTGGTAAAATAACGTTTCAACCGATGCAGTATGT
TCGAAGCCGTTTTGAATTTTTTCTCAAAAATCAAGGTACTCCTGAAGATTTAGTGGTCGATCTTTGTATTGGAGTTTTAG
AAGCCGTTGAAAACGCAGTCAAATACGGAGACGGTACCGAAGTAGAAGTGGAATATTATATCGATCCTTCTCAAACTCTT
TTTATACAAATTATAAACAACCTCAAAGAACTGAATTTAGAGCAGGACATAGAAAGGGGAAAATTTTCTTCCACGGCTAC
TCTTATGCGTGGTATGATGGTCATGCAAAAACTTTTTGATGAACTTGATCTTGAAATTTTAGAAAATAAGAAACAAGCTC
AGTTCAACGCCAAAAAAAAATTGTCATAG

Upstream 100 bases:

>100_bases
TAATTCAGTCGCAGTAATTTCATACGAAGCGATGCGCCAAATTAAGTCTTGGTAAAAACGGATTTACACTTTCAGAATTT
CACATCTCAATGGGTAAAGT

Downstream 100 bases:

>100_bases
TGTAGTATGGCTTCCGTTTTTAAAATTCATTCTGCATACCAGCCGGCCGGGGATCAAGTCAAAGCGATCCAAAATATTGC
CGATTCTTTTCAAAAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTFRLSKEEIEKQIRSMLSQGLTGTVNDFFSWIRMDTIRKFKDEPDLENTIVENILESFVESSYVKRSKFNSKEFHIHPD
VIQDKKFPPKECYTLLGKITFQPMQYVRSRFEFFLKNQGTPEDLVVDLCIGVLEAVENAVKYGDGTEVEVEYYIDPSQTL
FIQIINNLKELNLEQDIERGKFSSTATLMRGMMVMQKLFDELDLEILENKKQAQFNAKKKLS

Sequences:

>Translated_222_residues
MTFRLSKEEIEKQIRSMLSQGLTGTVNDFFSWIRMDTIRKFKDEPDLENTIVENILESFVESSYVKRSKFNSKEFHIHPD
VIQDKKFPPKECYTLLGKITFQPMQYVRSRFEFFLKNQGTPEDLVVDLCIGVLEAVENAVKYGDGTEVEVEYYIDPSQTL
FIQIINNLKELNLEQDIERGKFSSTATLMRGMMVMQKLFDELDLEILENKKQAQFNAKKKLS
>Mature_221_residues
TFRLSKEEIEKQIRSMLSQGLTGTVNDFFSWIRMDTIRKFKDEPDLENTIVENILESFVESSYVKRSKFNSKEFHIHPDV
IQDKKFPPKECYTLLGKITFQPMQYVRSRFEFFLKNQGTPEDLVVDLCIGVLEAVENAVKYGDGTEVEVEYYIDPSQTLF
IQIINNLKELNLEQDIERGKFSSTATLMRGMMVMQKLFDELDLEILENKKQAQFNAKKKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25980; Mature: 25849

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRLSKEEIEKQIRSMLSQGLTGTVNDFFSWIRMDTIRKFKDEPDLENTIVENILESFV
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ESSYVKRSKFNSKEFHIHPDVIQDKKFPPKECYTLLGKITFQPMQYVRSRFEFFLKNQGT
HHHHHHHHCCCCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEDLVVDLCIGVLEAVENAVKYGDGTEVEVEYYIDPSQTLFIQIINNLKELNLEQDIERG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHC
KFSSTATLMRGMMVMQKLFDELDLEILENKKQAQFNAKKKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure 
TFRLSKEEIEKQIRSMLSQGLTGTVNDFFSWIRMDTIRKFKDEPDLENTIVENILESFV
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ESSYVKRSKFNSKEFHIHPDVIQDKKFPPKECYTLLGKITFQPMQYVRSRFEFFLKNQGT
HHHHHHHHCCCCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEDLVVDLCIGVLEAVENAVKYGDGTEVEVEYYIDPSQTLFIQIINNLKELNLEQDIERG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHC
KFSSTATLMRGMMVMQKLFDELDLEILENKKQAQFNAKKKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA