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The map label for this gene is 45658505

Identifier: 45658505

GI number: 45658505

Start: 3229238

End: 3230053

Strand: Reverse

Name: 45658505

Synonym: LIC12669

Alternate gene names: NA

Gene position: 3230053-3229238 (Counterclockwise)

Preceding gene: 45658506

Following gene: 45658504

Centisome position: 75.52

GC content: 36.03

Gene sequence:

>816_bases
TTGAAATCTATAGTCTTAAAAATTTCGGTTCTTTTTTGTTTATTTATTAGTTATTCTGCATATTCAGAAGAAAGAAAGTA
TACCTATTATATAGAATGGAACGAAGTAAAGGGAAATAACGGTTATAAGGTGGAAGTTAGAAAAATTTCCAATCCTGAAA
TTCTTGTAGCCGAAGAAAAAACGGTCACTAGTAGTTTAGAATTTTTAATTCCTGCGGGTGAATACGAATTTAGAATTTCC
GCTCTGAATCGTTTTGGAAAACCATCCTCTTGGAGTCAGTGGTCTTCTTTTCAAGTGGAACAAGATAAACCTAAAAGTGT
GGTGGAAGCGGAAAAAAAGTTGACTGCAGCGGGAGTTTCTACTTGGAAGATATGGGTTCCTGGTTTGTTACCGATAGAAA
GAAAAGAATATATCAAGGCTTCTTTGATTTTTTTGTGGTTTGGTGCGCTTGCAGTTGCGGGTAACGCGGAAAGAGTTGCG
GGTAATTCTTTTGCACAATCCGCCACAAATGATCCTGCGTTTTTAACATTAGTTTCTTTTTATGCGCCTTTACCGGTATC
GATCTATTTTCTTCAGCAAAGAGATGGAGATAAAAAAGAATACGAAAGGCATCAAAATAATCAGGTGAGTATAGGTCTTT
TAGCTATTTTGAGCTACGGCTTAAACGTATGGTTGGAAAAACGTTCTTTTCATTCTACTACCGTTTTGATAGAATCCAAA
CCGGAAAGTATGTCCAGAGGAAATGATTCTTATCAGCAATCAAACGTTTTGTTTTCTTTGGGAAGGTTCGAAATTAGTTT
TCGAAAGGAGCTATAA

Upstream 100 bases:

>100_bases
AACGAATCCAATCAAACTAAGTCTGAATTTACGATTGTTTTGAGAGAGGACTTAGCCGCTCCCGAAACGAAAACAACTGG
TAAAAAAGGGGAGTGACGGA

Downstream 100 bases:

>100_bases
TGATCGTGCAAAAAATTGGTTTCTTTAGAAAGATTCCTTTTTTATGGAATTGGATTTATGTTTTTGGTAATTGTATTAAA
AATATTCAAAAAATAATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKSIVLKISVLFCLFISYSAYSEERKYTYYIEWNEVKGNNGYKVEVRKISNPEILVAEEKTVTSSLEFLIPAGEYEFRIS
ALNRFGKPSSWSQWSSFQVEQDKPKSVVEAEKKLTAAGVSTWKIWVPGLLPIERKEYIKASLIFLWFGALAVAGNAERVA
GNSFAQSATNDPAFLTLVSFYAPLPVSIYFLQQRDGDKKEYERHQNNQVSIGLLAILSYGLNVWLEKRSFHSTTVLIESK
PESMSRGNDSYQQSNVLFSLGRFEISFRKEL

Sequences:

>Translated_271_residues
MKSIVLKISVLFCLFISYSAYSEERKYTYYIEWNEVKGNNGYKVEVRKISNPEILVAEEKTVTSSLEFLIPAGEYEFRIS
ALNRFGKPSSWSQWSSFQVEQDKPKSVVEAEKKLTAAGVSTWKIWVPGLLPIERKEYIKASLIFLWFGALAVAGNAERVA
GNSFAQSATNDPAFLTLVSFYAPLPVSIYFLQQRDGDKKEYERHQNNQVSIGLLAILSYGLNVWLEKRSFHSTTVLIESK
PESMSRGNDSYQQSNVLFSLGRFEISFRKEL
>Mature_271_residues
MKSIVLKISVLFCLFISYSAYSEERKYTYYIEWNEVKGNNGYKVEVRKISNPEILVAEEKTVTSSLEFLIPAGEYEFRIS
ALNRFGKPSSWSQWSSFQVEQDKPKSVVEAEKKLTAAGVSTWKIWVPGLLPIERKEYIKASLIFLWFGALAVAGNAERVA
GNSFAQSATNDPAFLTLVSFYAPLPVSIYFLQQRDGDKKEYERHQNNQVSIGLLAILSYGLNVWLEKRSFHSTTVLIESK
PESMSRGNDSYQQSNVLFSLGRFEISFRKEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30909; Mature: 30909

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIVLKISVLFCLFISYSAYSEERKYTYYIEWNEVKGNNGYKVEVRKISNPEILVAEEK
CCCEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEECCC
TVTSSLEFLIPAGEYEFRISALNRFGKPSSWSQWSSFQVEQDKPKSVVEAEKKLTAAGVS
HHHCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCE
TWKIWVPGLLPIERKEYIKASLIFLWFGALAVAGNAERVAGNSFAQSATNDPAFLTLVSF
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCHHHHHHHH
YAPLPVSIYFLQQRDGDKKEYERHQNNQVSIGLLAILSYGLNVWLEKRSFHSTTVLIESK
HCCCCEEEEEEECCCCCHHHHHHHCCCCEEHHHHHHHHHCCEEEEECCCCCEEEEEEECC
PESMSRGNDSYQQSNVLFSLGRFEISFRKEL
CCHHHCCCCCHHHCCEEEEECCEEEEEECCC
>Mature Secondary Structure
MKSIVLKISVLFCLFISYSAYSEERKYTYYIEWNEVKGNNGYKVEVRKISNPEILVAEEK
CCCEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCEEEECCC
TVTSSLEFLIPAGEYEFRISALNRFGKPSSWSQWSSFQVEQDKPKSVVEAEKKLTAAGVS
HHHCCEEEEEECCCCEEEEEHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCE
TWKIWVPGLLPIERKEYIKASLIFLWFGALAVAGNAERVAGNSFAQSATNDPAFLTLVSF
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCCCCHHHHHHHH
YAPLPVSIYFLQQRDGDKKEYERHQNNQVSIGLLAILSYGLNVWLEKRSFHSTTVLIESK
HCCCCEEEEEEECCCCCHHHHHHHCCCCEEHHHHHHHHHCCEEEEECCCCCEEEEEEECC
PESMSRGNDSYQQSNVLFSLGRFEISFRKEL
CCHHHCCCCCHHHCCEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA