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The map label for this gene is 45658504

Identifier: 45658504

GI number: 45658504

Start: 3228471

End: 3229238

Strand: Reverse

Name: 45658504

Synonym: LIC12668

Alternate gene names: NA

Gene position: 3229238-3228471 (Counterclockwise)

Preceding gene: 45658505

Following gene: 45658503

Centisome position: 75.5

GC content: 36.59

Gene sequence:

>768_bases
ATGATCGTGCAAAAAATTGGTTTCTTTAGAAAGATTCCTTTTTTATGGAATTGGATTTATGTTTTTGGTAATTGTATTAA
AAATATTCAAAAAATAATATATTCTTTTTTAATTGTGTTTTGTTTTGTATCTCGTTGTTCGGTTCCGTTTCCAAATTTTA
ATTCGAACCTTTTGTTATTGCCTTTGTTAAATGCAAACAATACAAATAACGTTTCCGATCCTAATCTTGAATTGAAATAT
ATTTTTGTTGCCGTTACAGGAACAACTGGGCAGATAGGCGCGGGTACTGTGACGGGAGCCGATACTATTTGTACGAACGA
AAAAAATACAAACTTTACTTCTTTGCCCGGAAATGGAACTGACTATAAGGCTTTGATTGCTTCGACGTTGGCTCCTATAC
GAAGAGCTTGTAATGCTACTCCCAATTGTACAAACTCTGCAGAAAATGTGAATTGGGTTCTATTGCCCAATCAGGATTAT
TATAAGGGAACGGTTACTTCTCCCGTAAAAGTGTTTACCACTAATTCTGCGGGGATTGTAGTTTTTCCTTCTCTCAGTTC
AATTGATTCTAACGCGGCTACTACTTGGTGGACCGGAATAGAGGATAATTGGATTTCCAGTCCGGATCACTGTGCCAACT
GGACGGATGGAACTGTCATTAGTAATGGGCAGTTTGGTAGCGGAAATACAATTTCTAATGCTTCTATCGCATCAGGATTT
ACTTTGGATTGTAGTATTTCTAGAAAACTAGTCTGTGTAAGGCAATAA

Upstream 100 bases:

>100_bases
CCAAACCGGAAAGTATGTCCAGAGGAAATGATTCTTATCAGCAATCAAACGTTTTGTTTTCTTTGGGAAGGTTCGAAATT
AGTTTTCGAAAGGAGCTATA

Downstream 100 bases:

>100_bases
AAGAATTAAACACGAATGAGCTTGGAGCGGTTTGTTTGGAGAATGAGTAAAGCAGTGAACGTATTAGATTGAGTATATTA
TAAATACTAAATGTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIVQKIGFFRKIPFLWNWIYVFGNCIKNIQKIIYSFLIVFCFVSRCSVPFPNFNSNLLLLPLLNANNTNNVSDPNLELKY
IFVAVTGTTGQIGAGTVTGADTICTNEKNTNFTSLPGNGTDYKALIASTLAPIRRACNATPNCTNSAENVNWVLLPNQDY
YKGTVTSPVKVFTTNSAGIVVFPSLSSIDSNAATTWWTGIEDNWISSPDHCANWTDGTVISNGQFGSGNTISNASIASGF
TLDCSISRKLVCVRQ

Sequences:

>Translated_255_residues
MIVQKIGFFRKIPFLWNWIYVFGNCIKNIQKIIYSFLIVFCFVSRCSVPFPNFNSNLLLLPLLNANNTNNVSDPNLELKY
IFVAVTGTTGQIGAGTVTGADTICTNEKNTNFTSLPGNGTDYKALIASTLAPIRRACNATPNCTNSAENVNWVLLPNQDY
YKGTVTSPVKVFTTNSAGIVVFPSLSSIDSNAATTWWTGIEDNWISSPDHCANWTDGTVISNGQFGSGNTISNASIASGF
TLDCSISRKLVCVRQ
>Mature_255_residues
MIVQKIGFFRKIPFLWNWIYVFGNCIKNIQKIIYSFLIVFCFVSRCSVPFPNFNSNLLLLPLLNANNTNNVSDPNLELKY
IFVAVTGTTGQIGAGTVTGADTICTNEKNTNFTSLPGNGTDYKALIASTLAPIRRACNATPNCTNSAENVNWVLLPNQDY
YKGTVTSPVKVFTTNSAGIVVFPSLSSIDSNAATTWWTGIEDNWISSPDHCANWTDGTVISNGQFGSGNTISNASIASGF
TLDCSISRKLVCVRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27767; Mature: 27767

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVQKIGFFRKIPFLWNWIYVFGNCIKNIQKIIYSFLIVFCFVSRCSVPFPNFNSNLLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
PLLNANNTNNVSDPNLELKYIFVAVTGTTGQIGAGTVTGADTICTNEKNTNFTSLPGNGT
EEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCEEECCCCCCCEEECCCCCC
DYKALIASTLAPIRRACNATPNCTNSAENVNWVLLPNQDYYKGTVTSPVKVFTTNSAGIV
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEE
VFPSLSSIDSNAATTWWTGIEDNWISSPDHCANWTDGTVISNGQFGSGNTISNASIASGF
EECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
TLDCSISRKLVCVRQ
EEEEECCCEEEEEEC
>Mature Secondary Structure
MIVQKIGFFRKIPFLWNWIYVFGNCIKNIQKIIYSFLIVFCFVSRCSVPFPNFNSNLLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
PLLNANNTNNVSDPNLELKYIFVAVTGTTGQIGAGTVTGADTICTNEKNTNFTSLPGNGT
EEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECCCCEEECCCCCCCEEECCCCCC
DYKALIASTLAPIRRACNATPNCTNSAENVNWVLLPNQDYYKGTVTSPVKVFTTNSAGIV
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEE
VFPSLSSIDSNAATTWWTGIEDNWISSPDHCANWTDGTVISNGQFGSGNTISNASIASGF
EECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE
TLDCSISRKLVCVRQ
EEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA