Click here to switch to the map view.

The map label for this gene is 45658481

Identifier: 45658481

GI number: 45658481

Start: 3202494

End: 3203498

Strand: Reverse

Name: 45658481

Synonym: LIC12644

Alternate gene names: NA

Gene position: 3203498-3202494 (Counterclockwise)

Preceding gene: 45658482

Following gene: 45658471

Centisome position: 74.9

GC content: 36.72

Gene sequence:

>1005_bases
GTGAACGTGATCCTATCTAATTTCAATCATCCTAGATTTAAAGAGAACGATTCGAAGGGGCATTATGAAAGTTGGTTTGT
TAGAGCTAATCATCCTAACACTTGTAAGGCGATATGGATTCGTTATACGATTTTTTCTCCAAAAAACTTTCCCGAAAAGG
CAATGGGCGAACTTTGGGCGATTTATTTTGACGGCGAAAAAAATACTCGGTTCGTTTCTAAGTCTGAATTCCCAATCGAT
AAATGTAAATTTAATACTACTCCTTTATCTATAATGATAGGAGATTCAGAACTTTCTGATTCTCATCTTAAAGGAAGTGC
TGGAAATAAAAAAGATTCCGAAGATTTTTTCTGGGACTTAAATATTTCAAATGGAAGCCCTCCGCTCTTTCTTTTTCCTG
AAAACTTATACCAGGGATCTTTTCCAAAAGCGAAAGTTTTAGTCGGAAATCCTTTGGTGAAACTTAATGGTAATTTGAAA
TTAGATTCGAAAGAGATTCCAGTCCAAGATTGGTTAGGAAGTCATAATCATAACTGGGGTTCCAAACATACGGATCAATA
TGCTTGGGGACAGGTTGTTGGTTTTGAGGAAGAAATAGATTCTTTTTTAGAACTTGCTACCGCTAATTTAAAAATAGGAC
CTTTCTGGATTCCTGCAATTACTCCTATCGTATTTCGTTTTAGAGGAAAGGATTATAAACTCAATCATCCTTTTAAAAGT
TTTGGAAGGGCTCAGTATCGTTACTTCGATTGGAATTTTTCCGCGAGTTCGAAAGAGATTCAACTTAAAGGTAGAATTTA
TGCCGAACCCAAGGACTTCGCTTGTCTTCAGTATTGGAATCCTCCCGGTGGTTGGAAATATTGCCTCAATAGTAAGATTG
CAAGCACGGAACTATTTGTTAAGAGGAAAGAAGATCTCACTTTCTTAAAACTGACTTCGAGTCGTAAAACCGCGTTTGAA
ATTCTTACAGACGATCTTTCTCATGGAATGAAGCCGGAAGTTTAG

Upstream 100 bases:

>100_bases
ACCTCAAAGCAAAAATTCAATTTAAAAAGTAGAATTCTACTTGAGAAAGTAAAAAAGTTCGATAGTAAAGGGTCACAAAT
TTTTTGATTTAAGGAAAATT

Downstream 100 bases:

>100_bases
AAAAGAAAAATTATAGGTTCATTTAATTTTTTCTAAAATTTAAAAAATCAGTTTTTAATTATAATAGTTTGGAATTTGTG
TGCAATTATTGAGTAAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNVILSNFNHPRFKENDSKGHYESWFVRANHPNTCKAIWIRYTIFSPKNFPEKAMGELWAIYFDGEKNTRFVSKSEFPID
KCKFNTTPLSIMIGDSELSDSHLKGSAGNKKDSEDFFWDLNISNGSPPLFLFPENLYQGSFPKAKVLVGNPLVKLNGNLK
LDSKEIPVQDWLGSHNHNWGSKHTDQYAWGQVVGFEEEIDSFLELATANLKIGPFWIPAITPIVFRFRGKDYKLNHPFKS
FGRAQYRYFDWNFSASSKEIQLKGRIYAEPKDFACLQYWNPPGGWKYCLNSKIASTELFVKRKEDLTFLKLTSSRKTAFE
ILTDDLSHGMKPEV

Sequences:

>Translated_334_residues
MNVILSNFNHPRFKENDSKGHYESWFVRANHPNTCKAIWIRYTIFSPKNFPEKAMGELWAIYFDGEKNTRFVSKSEFPID
KCKFNTTPLSIMIGDSELSDSHLKGSAGNKKDSEDFFWDLNISNGSPPLFLFPENLYQGSFPKAKVLVGNPLVKLNGNLK
LDSKEIPVQDWLGSHNHNWGSKHTDQYAWGQVVGFEEEIDSFLELATANLKIGPFWIPAITPIVFRFRGKDYKLNHPFKS
FGRAQYRYFDWNFSASSKEIQLKGRIYAEPKDFACLQYWNPPGGWKYCLNSKIASTELFVKRKEDLTFLKLTSSRKTAFE
ILTDDLSHGMKPEV
>Mature_334_residues
MNVILSNFNHPRFKENDSKGHYESWFVRANHPNTCKAIWIRYTIFSPKNFPEKAMGELWAIYFDGEKNTRFVSKSEFPID
KCKFNTTPLSIMIGDSELSDSHLKGSAGNKKDSEDFFWDLNISNGSPPLFLFPENLYQGSFPKAKVLVGNPLVKLNGNLK
LDSKEIPVQDWLGSHNHNWGSKHTDQYAWGQVVGFEEEIDSFLELATANLKIGPFWIPAITPIVFRFRGKDYKLNHPFKS
FGRAQYRYFDWNFSASSKEIQLKGRIYAEPKDFACLQYWNPPGGWKYCLNSKIASTELFVKRKEDLTFLKLTSSRKTAFE
ILTDDLSHGMKPEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38540; Mature: 38540

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVILSNFNHPRFKENDSKGHYESWFVRANHPNTCKAIWIRYTIFSPKNFPEKAMGELWA
CEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHCCCEEE
IYFDGEKNTRFVSKSEFPIDKCKFNTTPLSIMIGDSELSDSHLKGSAGNKKDSEDFFWDL
EEECCCCCCEEEECCCCCHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
NISNGSPPLFLFPENLYQGSFPKAKVLVGNPLVKLNGNLKLDSKEIPVQDWLGSHNHNWG
EECCCCCCEEEECHHHCCCCCCCEEEEECCCEEEECCCEEECCCCCCHHHHHCCCCCCCC
SKHTDQYAWGQVVGFEEEIDSFLELATANLKIGPFWIPAITPIVFRFRGKDYKLNHPFKS
CCCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCEEHHHHCEEEEEECCCCEEECCCHHH
FGRAQYRYFDWNFSASSKEIQLKGRIYAEPKDFACLQYWNPPGGWKYCLNSKIASTELFV
HCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEE
KRKEDLTFLKLTSSRKTAFEILTDDLSHGMKPEV
EECCCEEEEEEECCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNVILSNFNHPRFKENDSKGHYESWFVRANHPNTCKAIWIRYTIFSPKNFPEKAMGELWA
CEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCHHHCCCEEE
IYFDGEKNTRFVSKSEFPIDKCKFNTTPLSIMIGDSELSDSHLKGSAGNKKDSEDFFWDL
EEECCCCCCEEEECCCCCHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
NISNGSPPLFLFPENLYQGSFPKAKVLVGNPLVKLNGNLKLDSKEIPVQDWLGSHNHNWG
EECCCCCCEEEECHHHCCCCCCCEEEEECCCEEEECCCEEECCCCCCHHHHHCCCCCCCC
SKHTDQYAWGQVVGFEEEIDSFLELATANLKIGPFWIPAITPIVFRFRGKDYKLNHPFKS
CCCCCCCCCCEEECCHHHHHHHHHHHHCCEEECCEEHHHHCEEEEEECCCCEEECCCHHH
FGRAQYRYFDWNFSASSKEIQLKGRIYAEPKDFACLQYWNPPGGWKYCLNSKIASTELFV
HCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEE
KRKEDLTFLKLTSSRKTAFEILTDDLSHGMKPEV
EECCCEEEEEEECCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA