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The map label for this gene is 45658482

Identifier: 45658482

GI number: 45658482

Start: 3204530

End: 3206089

Strand: Reverse

Name: 45658482

Synonym: LIC12645

Alternate gene names: NA

Gene position: 3206089-3204530 (Counterclockwise)

Preceding gene: 45658483

Following gene: 45658481

Centisome position: 74.96

GC content: 33.33

Gene sequence:

>1560_bases
ATGTATTTTAAAATTTATTATTTTATTATTATATTCTTAATTTTTATCTATAGCCTACATTCTGTTTCTTATGAAGAAGC
GTATGCGATGGAAAAAGAAGATCCGTTGTTTTCAATCCCTTTATACGAAGAATTAGTTCGAACTTCACAAAAATCGGATA
TACGTAAAACCGCGTCTTCTAGACTTTTTTTTCTTTATGAGAAATATCGCAAATACATTCCCGCTATTTTAATCATGATT
CGTTCTGGAAAAATTACGGATAAAAAAGGAAAATATCCTGCGATCGTAACAGAACTTGCGAACGGTTTGAATGTAAGTCC
TTTTGCGTTGGTTTCTGTTGTTTCCGGTTGTAGTAAACCAATTCCAAAACCAGATGCTTTTTTTCAAGAAGTCAAATCGG
TACAATCAAAAGAAGAATTTATCGAGGAGGAAATACCTACAATACAAACGTTCGAAACCGTTGTAATTCCAGAGATGCCG
TTATTGTTTAAAATCCTTTTAAAAAAGGAAAATGCTTCGCTCTATAAGGTTTGTTATGCGGTAAAGATCAAAACGGGTGA
CTTTGACGGTTGGGAAAAAATACACGCTTTTGGAGAAATGAAAGGAGTTTTATCTTCCGAAACTTCTTTGGCTTTGCGTA
TCAGTTTTACTCTTCATTCGGGAAGAGGTAGTGCCTATAAAAGAATCTATTCAGGCGGCAAACTGAAAATGTTAAGCGAA
GAAGGTAAATCGGATCTTTTGTATTTATATGGAAAGTTTCTTAGAAACTTAGGAAAATACGATTCTTCTGCGAGATACTT
TTGGATGAGCGGTTCTTATGCTAATAAAGAGCGAAGTGAAATTGAAACTGCAAAAACCCTTTTGATCTCTGGAAGAAAAC
AGGAAGCTTGTTCTAATCTTTCGAAAAAGTTTTCTCCAGGAGATGAATCGGAAGAACTTTTATCCAGGGTGTGTTTTAAA
AATTTTGAAAGTAGCTCTGGGCTGTTAAAAGTTATAAGTCTTTTGAACGCCGATACTGCTGACCCTGTGTTTGAATATTT
TTTAGGAAAAAACGTTTTAGATAAAACGGAAGAATCTGATTCTGATGAAGCAGATTCTAATTATGGTAAACTTTTGGATG
AAAAATTATTTTCCGGAGAAAAAAATCCCACACCTTTTTGGGATTATCGAAGAATGAGAACTGAGTTTAACATTTCTAAC
CAACCTTCATTTATTTGTAAGTATGGGAAGGGCTCTCTATTTCAGAAAAGTTTAATACAACCTCAATATTGTGTTCCTTT
TCCTGAATTTTCTTTGGATGCGATTTTAGCAACTCCTTTGTTTACTTCAGATCAAGAAGAGTTGAGTTTAATTTTTTCCA
ATTCTTCCTATAATCCGATACCGGTTCAAATCATCTTTGCGAATTCGGATGGTTTAGAGTCTTCGTTTCAAATGAGGAAT
TTAGTATATCGTAAATCTCTAAATCGTTTTTTTGTAGAGGGCTTTTCAAGCGATAATCAATATAAATTTTATTCGGTCGA
TTTAAAGAAAATTTCTGTAAACGTATTGGATTTAAAATAG

Upstream 100 bases:

>100_bases
TGTAAACATCCTAGAAAGGAACTTTTTAAGAACGGAACTGTACCTTCTGAAGTTTGTCCCCTAAATCACGGAACGGATGT
AAAGCGAGAAGTCCTTCGTA

Downstream 100 bases:

>100_bases
AGTTTTTGAAAAATTCCATCTATTATCAATAAAACGGTGTTATTCGTTTGTTTTAGAACTTGTTCAAAAAATCATAAAAC
TAACGTGAGTTTTTGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MYFKIYYFIIIFLIFIYSLHSVSYEEAYAMEKEDPLFSIPLYEELVRTSQKSDIRKTASSRLFFLYEKYRKYIPAILIMI
RSGKITDKKGKYPAIVTELANGLNVSPFALVSVVSGCSKPIPKPDAFFQEVKSVQSKEEFIEEEIPTIQTFETVVIPEMP
LLFKILLKKENASLYKVCYAVKIKTGDFDGWEKIHAFGEMKGVLSSETSLALRISFTLHSGRGSAYKRIYSGGKLKMLSE
EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYANKERSEIETAKTLLISGRKQEACSNLSKKFSPGDESEELLSRVCFK
NFESSSGLLKVISLLNADTADPVFEYFLGKNVLDKTEESDSDEADSNYGKLLDEKLFSGEKNPTPFWDYRRMRTEFNISN
QPSFICKYGKGSLFQKSLIQPQYCVPFPEFSLDAILATPLFTSDQEELSLIFSNSSYNPIPVQIIFANSDGLESSFQMRN
LVYRKSLNRFFVEGFSSDNQYKFYSVDLKKISVNVLDLK

Sequences:

>Translated_519_residues
MYFKIYYFIIIFLIFIYSLHSVSYEEAYAMEKEDPLFSIPLYEELVRTSQKSDIRKTASSRLFFLYEKYRKYIPAILIMI
RSGKITDKKGKYPAIVTELANGLNVSPFALVSVVSGCSKPIPKPDAFFQEVKSVQSKEEFIEEEIPTIQTFETVVIPEMP
LLFKILLKKENASLYKVCYAVKIKTGDFDGWEKIHAFGEMKGVLSSETSLALRISFTLHSGRGSAYKRIYSGGKLKMLSE
EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYANKERSEIETAKTLLISGRKQEACSNLSKKFSPGDESEELLSRVCFK
NFESSSGLLKVISLLNADTADPVFEYFLGKNVLDKTEESDSDEADSNYGKLLDEKLFSGEKNPTPFWDYRRMRTEFNISN
QPSFICKYGKGSLFQKSLIQPQYCVPFPEFSLDAILATPLFTSDQEELSLIFSNSSYNPIPVQIIFANSDGLESSFQMRN
LVYRKSLNRFFVEGFSSDNQYKFYSVDLKKISVNVLDLK
>Mature_519_residues
MYFKIYYFIIIFLIFIYSLHSVSYEEAYAMEKEDPLFSIPLYEELVRTSQKSDIRKTASSRLFFLYEKYRKYIPAILIMI
RSGKITDKKGKYPAIVTELANGLNVSPFALVSVVSGCSKPIPKPDAFFQEVKSVQSKEEFIEEEIPTIQTFETVVIPEMP
LLFKILLKKENASLYKVCYAVKIKTGDFDGWEKIHAFGEMKGVLSSETSLALRISFTLHSGRGSAYKRIYSGGKLKMLSE
EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYANKERSEIETAKTLLISGRKQEACSNLSKKFSPGDESEELLSRVCFK
NFESSSGLLKVISLLNADTADPVFEYFLGKNVLDKTEESDSDEADSNYGKLLDEKLFSGEKNPTPFWDYRRMRTEFNISN
QPSFICKYGKGSLFQKSLIQPQYCVPFPEFSLDAILATPLFTSDQEELSLIFSNSSYNPIPVQIIFANSDGLESSFQMRN
LVYRKSLNRFFVEGFSSDNQYKFYSVDLKKISVNVLDLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59387; Mature: 59387

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKIYYFIIIFLIFIYSLHSVSYEEAYAMEKEDPLFSIPLYEELVRTSQKSDIRKTASS
CEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RLFFLYEKYRKYIPAILIMIRSGKITDKKGKYPAIVTELANGLNVSPFALVSVVSGCSKP
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCC
IPKPDAFFQEVKSVQSKEEFIEEEIPTIQTFETVVIPEMPLLFKILLKKENASLYKVCYA
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEEE
VKIKTGDFDGWEKIHAFGEMKGVLSSETSLALRISFTLHSGRGSAYKRIYSGGKLKMLSE
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHCCCCEEEECC
EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYANKERSEIETAKTLLISGRKQEACSNL
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
SKKFSPGDESEELLSRVCFKNFESSSGLLKVISLLNADTADPVFEYFLGKNVLDKTEESD
HHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCC
SDEADSNYGKLLDEKLFSGEKNPTPFWDYRRMRTEFNISNQPSFICKYGKGSLFQKSLIQ
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCC
PQYCVPFPEFSLDAILATPLFTSDQEELSLIFSNSSYNPIPVQIIFANSDGLESSFQMRN
CCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHH
LVYRKSLNRFFVEGFSSDNQYKFYSVDLKKISVNVLDLK
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MYFKIYYFIIIFLIFIYSLHSVSYEEAYAMEKEDPLFSIPLYEELVRTSQKSDIRKTASS
CEEEHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
RLFFLYEKYRKYIPAILIMIRSGKITDKKGKYPAIVTELANGLNVSPFALVSVVSGCSKP
HHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCC
IPKPDAFFQEVKSVQSKEEFIEEEIPTIQTFETVVIPEMPLLFKILLKKENASLYKVCYA
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHCCCCCEEEEEEE
VKIKTGDFDGWEKIHAFGEMKGVLSSETSLALRISFTLHSGRGSAYKRIYSGGKLKMLSE
EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHCCCCEEEECC
EGKSDLLYLYGKFLRNLGKYDSSARYFWMSGSYANKERSEIETAKTLLISGRKQEACSNL
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
SKKFSPGDESEELLSRVCFKNFESSSGLLKVISLLNADTADPVFEYFLGKNVLDKTEESD
HHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCCC
SDEADSNYGKLLDEKLFSGEKNPTPFWDYRRMRTEFNISNQPSFICKYGKGSLFQKSLIQ
CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCC
PQYCVPFPEFSLDAILATPLFTSDQEELSLIFSNSSYNPIPVQIIFANSDGLESSFQMRN
CCCCCCCCCCCHHHHHCCCCCCCCHHHEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHH
LVYRKSLNRFFVEGFSSDNQYKFYSVDLKKISVNVLDLK
HHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA