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The map label for this gene is 45658389

Identifier: 45658389

GI number: 45658389

Start: 3087570

End: 3088001

Strand: Reverse

Name: 45658389

Synonym: LIC12547

Alternate gene names: NA

Gene position: 3088001-3087570 (Counterclockwise)

Preceding gene: 45658395

Following gene: 45658388

Centisome position: 72.2

GC content: 33.8

Gene sequence:

>432_bases
ATGAATGAAGAAAAGTCACTGATTCTTTTGCGAGGTTTGCCAGGTGCAGGTAAAAGCAGACTCGCTAAACTTTTATCTGA
AAACGGAAAGTATCCGGTTTTTAGCGTGGATGACTATTTTACGGATTCTAAAACTCAAGAATATAATTTTGATTATAAAA
AAAATCATCTTGCATATAAACACTGCGAAGACTGTGTTCGAAAAGAAGCGGAACGTGGAACCTCTAAGATTTTTTCGGAC
AACACGTTTACACTTTCTTGGGAGATGGAGCCTTACTTTCAAATTGCATCCGAATTCGAATATACAATTTTTGTAATCAC
AGTAGAGAATTATCATAACGGAAAAAATGTTCATTCTATCGATGATGAATCCTTAAAAAAAATGGCTTCAAAATATAAGA
TTCGTCTTTTACCTGAAATACTTTCGGAATAA

Upstream 100 bases:

>100_bases
TCCTAAACCCTTAGCGTTTCCAGCTATTCAATACAAAAAAATTTCTTGCTGGATGTTTCTTATAGGTTAATCAAATTCAA
CGTATTTGTAAAGTAAAAGA

Downstream 100 bases:

>100_bases
ATATTTACATTAGAGTTGTTGAAAAATTTCATAGCAACAATTAACAAAACGTTTCAATCGACCGTTTCCATACAACGAAA
ACCCATAGAGAATTAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNEEKSLILLRGLPGAGKSRLAKLLSENGKYPVFSVDDYFTDSKTQEYNFDYKKNHLAYKHCEDCVRKEAERGTSKIFSD
NTFTLSWEMEPYFQIASEFEYTIFVITVENYHNGKNVHSIDDESLKKMASKYKIRLLPEILSE

Sequences:

>Translated_143_residues
MNEEKSLILLRGLPGAGKSRLAKLLSENGKYPVFSVDDYFTDSKTQEYNFDYKKNHLAYKHCEDCVRKEAERGTSKIFSD
NTFTLSWEMEPYFQIASEFEYTIFVITVENYHNGKNVHSIDDESLKKMASKYKIRLLPEILSE
>Mature_143_residues
MNEEKSLILLRGLPGAGKSRLAKLLSENGKYPVFSVDDYFTDSKTQEYNFDYKKNHLAYKHCEDCVRKEAERGTSKIFSD
NTFTLSWEMEPYFQIASEFEYTIFVITVENYHNGKNVHSIDDESLKKMASKYKIRLLPEILSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7656971, Length=143, Percent_Identity=31.4685314685315, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI119226224, Length=141, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16697; Mature: 16697

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEKSLILLRGLPGAGKSRLAKLLSENGKYPVFSVDDYFTDSKTQEYNFDYKKNHLAYK
CCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHH
HCEDCVRKEAERGTSKIFSDNTFTLSWEMEPYFQIASEFEYTIFVITVENYHNGKNVHSI
HHHHHHHHHHHCCHHHEECCCEEEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
DDESLKKMASKYKIRLLPEILSE
CHHHHHHHHHHHEEEEHHHHHCC
>Mature Secondary Structure
MNEEKSLILLRGLPGAGKSRLAKLLSENGKYPVFSVDDYFTDSKTQEYNFDYKKNHLAYK
CCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHH
HCEDCVRKEAERGTSKIFSDNTFTLSWEMEPYFQIASEFEYTIFVITVENYHNGKNVHSI
HHHHHHHHHHHCCHHHEECCCEEEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
DDESLKKMASKYKIRLLPEILSE
CHHHHHHHHHHHEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA