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The map label for this gene is 45658388

Identifier: 45658388

GI number: 45658388

Start: 3085192

End: 3086367

Strand: Reverse

Name: 45658388

Synonym: LIC12546

Alternate gene names: NA

Gene position: 3086367-3085192 (Counterclockwise)

Preceding gene: 45658389

Following gene: 45658387

Centisome position: 72.16

GC content: 34.61

Gene sequence:

>1176_bases
TTGACGATGAGTGGAATAAAATTGAAAGAGCGAGATTTAGATGTTATCAATTCTCCGGAACAAAGAAAACATATTATCGA
AAAACATTTACTCAATCAGAGTTTACGCATCAAAGGGGATCTAAATAGGGAAACGATTACAATTCAAAGATACGTTGATT
CCGGAGAAAAAATCATCGCAGGTATTTCAGATGAAACCCACTTTTCTGAAAACGATGAGATCGTATTATATAAGATACTC
GCCAAGTATGTACAATTAGAATGTAGTTTTATAAGAAAAACTAGACCAGGAGTCGCGGAGTTCTCTGTAAATAAAGTATC
CATCGCAAAATCCAATCGCGCTTTTCCACGTTATTCTGTCGCGGAGGATGCGGCTCACGTAACCAATATCAATTCTTCTA
AAACTGTCATAGATGCTTCTTTATTTAACATTCCTACTTTGGTAAAGGTAAGTTTTGAAGATTATAAAACAAAATTAAAA
CCGGATCAATTGGGTTTAGTTGAAATAGATGTTTTTAGGTCGGATCAAGATGAAAAGTTTGAATTGATTAAACGAACTAA
AAAATACATCCATATCGAAAATACTTCTCTGGAAGAATCCTATAAATCTAAGTCTGAAAACCAAGTGGATGTAGAAGATG
AGATTCACGAAGAAATTCCTTCTTTGATGAGGAAATATAAGGACGAAAAAATCGTTTCAGAAATTATTTATCCGATCATC
TATATCAATCATTCTAGACAGTCCATCCCCCTCGGATATATCTGGGTTCGAAACAAGGAAAAAACTCTCGGTAATAATAC
CATCGAAAAACTGGCCGAACTTTCTAAAGAGATGGTGGCTAGAATTAAAGAATCCAACACGGTTTTAACCACTGAAAAAT
TTCCGATTATTGATATTTCCAATAACGGTATTTGTATTAAAATTACGGAACCTCATTTAATTCAGACCCTTCCTAAACAC
ACAGGATTTGTGTTTGACATTTACATTCGTATGCAAGGTTATTTCAAAGTTTTTGGAGCAATCCGTTGGCTTTCTTACGA
CGAGGTAGGTAGCCTAATTTTAGGAATGGAGTTAGTTGCTAAGTCTTCTTTTCCAGGAGAAAGAGAAAAATTTCATAGAA
ATGTAGAACTTTTAGGCCAAGGAAAATTTACCGGTTTAAAAACGCACGCGATTTGA

Upstream 100 bases:

>100_bases
TCTATAATTTGAGAATTTAAGCGATAAATTTTATATTTACCGAATTCGCAACTAATTTCATTCTACGCAGGACGTTTATA
TTTTGTTTTGAGTTAAGGAT

Downstream 100 bases:

>100_bases
TTTTTATTTACTTAAGTATAGTATAATTTTTGAATCTTTTCTTTAAATATAAATTTGAATCGATGTCTGTTTTGAAGGTA
ATTTAATTTTTCAATTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTMSGIKLKERDLDVINSPEQRKHIIEKHLLNQSLRIKGDLNRETITIQRYVDSGEKIIAGISDETHFSENDEIVLYKIL
AKYVQLECSFIRKTRPGVAEFSVNKVSIAKSNRAFPRYSVAEDAAHVTNINSSKTVIDASLFNIPTLVKVSFEDYKTKLK
PDQLGLVEIDVFRSDQDEKFELIKRTKKYIHIENTSLEESYKSKSENQVDVEDEIHEEIPSLMRKYKDEKIVSEIIYPII
YINHSRQSIPLGYIWVRNKEKTLGNNTIEKLAELSKEMVARIKESNTVLTTEKFPIIDISNNGICIKITEPHLIQTLPKH
TGFVFDIYIRMQGYFKVFGAIRWLSYDEVGSLILGMELVAKSSFPGEREKFHRNVELLGQGKFTGLKTHAI

Sequences:

>Translated_391_residues
MTMSGIKLKERDLDVINSPEQRKHIIEKHLLNQSLRIKGDLNRETITIQRYVDSGEKIIAGISDETHFSENDEIVLYKIL
AKYVQLECSFIRKTRPGVAEFSVNKVSIAKSNRAFPRYSVAEDAAHVTNINSSKTVIDASLFNIPTLVKVSFEDYKTKLK
PDQLGLVEIDVFRSDQDEKFELIKRTKKYIHIENTSLEESYKSKSENQVDVEDEIHEEIPSLMRKYKDEKIVSEIIYPII
YINHSRQSIPLGYIWVRNKEKTLGNNTIEKLAELSKEMVARIKESNTVLTTEKFPIIDISNNGICIKITEPHLIQTLPKH
TGFVFDIYIRMQGYFKVFGAIRWLSYDEVGSLILGMELVAKSSFPGEREKFHRNVELLGQGKFTGLKTHAI
>Mature_390_residues
TMSGIKLKERDLDVINSPEQRKHIIEKHLLNQSLRIKGDLNRETITIQRYVDSGEKIIAGISDETHFSENDEIVLYKILA
KYVQLECSFIRKTRPGVAEFSVNKVSIAKSNRAFPRYSVAEDAAHVTNINSSKTVIDASLFNIPTLVKVSFEDYKTKLKP
DQLGLVEIDVFRSDQDEKFELIKRTKKYIHIENTSLEESYKSKSENQVDVEDEIHEEIPSLMRKYKDEKIVSEIIYPIIY
INHSRQSIPLGYIWVRNKEKTLGNNTIEKLAELSKEMVARIKESNTVLTTEKFPIIDISNNGICIKITEPHLIQTLPKHT
GFVFDIYIRMQGYFKVFGAIRWLSYDEVGSLILGMELVAKSSFPGEREKFHRNVELLGQGKFTGLKTHAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45000; Mature: 44869

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSGIKLKERDLDVINSPEQRKHIIEKHLLNQSLRIKGDLNRETITIQRYVDSGEKIIA
CCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEE
GISDETHFSENDEIVLYKILAKYVQLECSFIRKTRPGVAEFSVNKVSIAKSNRAFPRYSV
ECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCH
AEDAAHVTNINSSKTVIDASLFNIPTLVKVSFEDYKTKLKPDQLGLVEIDVFRSDQDEKF
HHHHHHHCCCCCCCEEEEEHHHCCCEEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCHHH
ELIKRTKKYIHIENTSLEESYKSKSENQVDVEDEIHEEIPSLMRKYKDEKIVSEIIYPII
HHHHHHHHEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
YINHSRQSIPLGYIWVRNKEKTLGNNTIEKLAELSKEMVARIKESNTVLTTEKFPIIDIS
EEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC
NNGICIKITEPHLIQTLPKHTGFVFDIYIRMQGYFKVFGAIRWLSYDEVGSLILGMELVA
CCCEEEEECCCHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSSFPGEREKFHRNVELLGQGKFTGLKTHAI
CCCCCCHHHHHHCCCEEEECCCCCCEEECCC
>Mature Secondary Structure 
TMSGIKLKERDLDVINSPEQRKHIIEKHLLNQSLRIKGDLNRETITIQRYVDSGEKIIA
CCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCEEEE
GISDETHFSENDEIVLYKILAKYVQLECSFIRKTRPGVAEFSVNKVSIAKSNRAFPRYSV
ECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCH
AEDAAHVTNINSSKTVIDASLFNIPTLVKVSFEDYKTKLKPDQLGLVEIDVFRSDQDEKF
HHHHHHHCCCCCCCEEEEEHHHCCCEEEEEEHHHHHCCCCCCCCCEEEEEEECCCCCHHH
ELIKRTKKYIHIENTSLEESYKSKSENQVDVEDEIHEEIPSLMRKYKDEKIVSEIIYPII
HHHHHHHHEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
YINHSRQSIPLGYIWVRNKEKTLGNNTIEKLAELSKEMVARIKESNTVLTTEKFPIIDIS
EEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC
NNGICIKITEPHLIQTLPKHTGFVFDIYIRMQGYFKVFGAIRWLSYDEVGSLILGMELVA
CCCEEEEECCCHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSSFPGEREKFHRNVELLGQGKFTGLKTHAI
CCCCCCHHHHHHCCCEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA