Click here to switch to the map view.

The map label for this gene is 45658339

Identifier: 45658339

GI number: 45658339

Start: 3023351

End: 3023761

Strand: Reverse

Name: 45658339

Synonym: LIC12497

Alternate gene names: NA

Gene position: 3023761-3023351 (Counterclockwise)

Preceding gene: 45658343

Following gene: 45658338

Centisome position: 70.7

GC content: 33.09

Gene sequence:

>411_bases
TTGCGCTTATTTAGGATGCTTATAAACTTGGATGACAAATTTCCCAGATCTGAAACAAAAATGTTCTATTTTCTGTTACC
TACACTTTTTTTATTCTTTCGTCTTGAATCGACTGAAACAAATCCTTGGAATCTTTCTATCGGTGAAAGAATTATCAATC
GAAAACACGTCTCTCATATCATAATAGAAACTAGAGTTGATCATTTTAGAGTTTCGATTTTGTTAAACGAACGTTTCCCT
TATAACTACAAATCTAGATCTGGTTCTTTTTTTATCAGGGTAAACGATGAAAAAGAGGCGCTTAAAATTTCGGAAAAGCT
GGATCAATATCTAGAGTCCGGATGGAATTTGAAAATTTATCTTTCCGGATCGGAAATTGTTCGTTATGACTTGGATAAAA
CGATTCAGTAG

Upstream 100 bases:

>100_bases
ATGTTTTACTAAGAGCATGGTTAAAGATTTTTCTAAAATCCTTAAAAGTAAACTCGAATCGAATCTGGATTTTTGATTTT
GAAAAAAAGATCGGAATGAT

Downstream 100 bases:

>100_bases
ATTCAAATCCGATTTTTTAAACCCTTTCACTTTCTTTGAAAGGGAATTTAATTATAGCGAGGCTCAGTCTTGGAAAGATC
AGACTAGAATCGATCAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRLFRMLINLDDKFPRSETKMFYFLLPTLFLFFRLESTETNPWNLSIGERIINRKHVSHIIIETRVDHFRVSILLNERFP
YNYKSRSGSFFIRVNDEKEALKISEKLDQYLESGWNLKIYLSGSEIVRYDLDKTIQ

Sequences:

>Translated_136_residues
MRLFRMLINLDDKFPRSETKMFYFLLPTLFLFFRLESTETNPWNLSIGERIINRKHVSHIIIETRVDHFRVSILLNERFP
YNYKSRSGSFFIRVNDEKEALKISEKLDQYLESGWNLKIYLSGSEIVRYDLDKTIQ
>Mature_136_residues
MRLFRMLINLDDKFPRSETKMFYFLLPTLFLFFRLESTETNPWNLSIGERIINRKHVSHIIIETRVDHFRVSILLNERFP
YNYKSRSGSFFIRVNDEKEALKISEKLDQYLESGWNLKIYLSGSEIVRYDLDKTIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16446; Mature: 16446

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFRMLINLDDKFPRSETKMFYFLLPTLFLFFRLESTETNPWNLSIGERIINRKHVSHI
CHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHE
IIETRVDHFRVSILLNERFPYNYKSRSGSFFIRVNDEKEALKISEKLDQYLESGWNLKIY
EEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEE
LSGSEIVRYDLDKTIQ
ECCCEEEEECCCCCCC
>Mature Secondary Structure
MRLFRMLINLDDKFPRSETKMFYFLLPTLFLFFRLESTETNPWNLSIGERIINRKHVSHI
CHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEHHHHHHHHHHHHHE
IIETRVDHFRVSILLNERFPYNYKSRSGSFFIRVNDEKEALKISEKLDQYLESGWNLKIY
EEEECCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEE
LSGSEIVRYDLDKTIQ
ECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA