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The map label for this gene is 45658343

Identifier: 45658343

GI number: 45658343

Start: 3029437

End: 3030378

Strand: Reverse

Name: 45658343

Synonym: LIC12501

Alternate gene names: NA

Gene position: 3030378-3029437 (Counterclockwise)

Preceding gene: 45658344

Following gene: 45658339

Centisome position: 70.85

GC content: 35.24

Gene sequence:

>942_bases
ATGTCGTTTTCCAGAAAACTCGAAGAAGCTAATCAACATCTATCAGACGGAGATTTTGATAAGGCTAAAAAAGTTTTCGA
TTTACTTCTGGGAGAAGATCCAGAACACCCGGAAACGATTGCTGGTTATTTTATATCTTCCTATTGGGATAATCGTTTGG
ATCGGATTCATAACACAAAAGAAGGAAGAGATAGAAGCCATATTCTTGTTCAATATTTTTCAGAATTTCAAAACGCGTTC
GAACTAAAAAAATTTACTGGAACTTCTTCTTTTCGTGCGGTTTCGGAATCGGTTTTATCAGAAGCAGTGGATCAATTAAA
AATATCGGTTCAAAGAGAAGGTCTTCACTTTCAAGATCCTTCTGCGTTATTAAGTTTGATACGTGAACTCATTCGTTTTA
GGGATTATAAAAATGCGCTCGAAATCTTAAATTATTCTTCTTCGGTGGAAAAAAATTCTCCCGAGTTTCTTTATTTGAGA
GCGGAATCACTTTTTCAAACCGGCGAAGAAAGAAAAGCCCTCCTTCTTTTTAGAGAAGCCTTTTTAAAAGATCCTTCTGT
TGCTCCTCTCGCCGTTTTGAAATCGGGTCCGATTTATTTTTGGGTCGAAAAATTAAAAGGTTCTTATCAGGATGAATCGG
ATCTAAAAGAGGTTCTGCCGGTTGTTTTGGCAGAGCGCGGGATTTTCGAAGAGACTAGAAATTATTCCGAAAAAGAAATT
TTAGTATATTATAACAATTTAATTCGTTTGAAAGATACGTTAAATTCTAGAAAGGATTTATACGATTTTAAAATCCGTTG
TAGAATTTTACAACACGCCTGTCTAATTTTAGACGTATGTAGAAATATGCAGTATGGAGAAATCTATCAGGAATCCAAAA
GAATTTTAGATTCCGTAGATCCTGGTTTTTTTCTAAGAAGGCAAAACGGAACCCAGGATTAA

Upstream 100 bases:

>100_bases
GATCGTTAAACAAGTCAGTAAACATCATGATAAGAAAGTGAATCATTAATCCTCCGGTGGAGTTCTTCTGCCGGATTTCA
AATTCAATACCCGAATCTTA

Downstream 100 bases:

>100_bases
ACTGGGTTTTGTCGTTTCTTAAATATTCTTAAATCTTAAACTGATTGATAAGGCGCAATAATCCTTCTGATTGGGTATGC
ATATTTTTAGAAAATCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSFSRKLEEANQHLSDGDFDKAKKVFDLLLGEDPEHPETIAGYFISSYWDNRLDRIHNTKEGRDRSHILVQYFSEFQNAF
ELKKFTGTSSFRAVSESVLSEAVDQLKISVQREGLHFQDPSALLSLIRELIRFRDYKNALEILNYSSSVEKNSPEFLYLR
AESLFQTGEERKALLLFREAFLKDPSVAPLAVLKSGPIYFWVEKLKGSYQDESDLKEVLPVVLAERGIFEETRNYSEKEI
LVYYNNLIRLKDTLNSRKDLYDFKIRCRILQHACLILDVCRNMQYGEIYQESKRILDSVDPGFFLRRQNGTQD

Sequences:

>Translated_313_residues
MSFSRKLEEANQHLSDGDFDKAKKVFDLLLGEDPEHPETIAGYFISSYWDNRLDRIHNTKEGRDRSHILVQYFSEFQNAF
ELKKFTGTSSFRAVSESVLSEAVDQLKISVQREGLHFQDPSALLSLIRELIRFRDYKNALEILNYSSSVEKNSPEFLYLR
AESLFQTGEERKALLLFREAFLKDPSVAPLAVLKSGPIYFWVEKLKGSYQDESDLKEVLPVVLAERGIFEETRNYSEKEI
LVYYNNLIRLKDTLNSRKDLYDFKIRCRILQHACLILDVCRNMQYGEIYQESKRILDSVDPGFFLRRQNGTQD
>Mature_312_residues
SFSRKLEEANQHLSDGDFDKAKKVFDLLLGEDPEHPETIAGYFISSYWDNRLDRIHNTKEGRDRSHILVQYFSEFQNAFE
LKKFTGTSSFRAVSESVLSEAVDQLKISVQREGLHFQDPSALLSLIRELIRFRDYKNALEILNYSSSVEKNSPEFLYLRA
ESLFQTGEERKALLLFREAFLKDPSVAPLAVLKSGPIYFWVEKLKGSYQDESDLKEVLPVVLAERGIFEETRNYSEKEIL
VYYNNLIRLKDTLNSRKDLYDFKIRCRILQHACLILDVCRNMQYGEIYQESKRILDSVDPGFFLRRQNGTQD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36573; Mature: 36442

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSRKLEEANQHLSDGDFDKAKKVFDLLLGEDPEHPETIAGYFISSYWDNRLDRIHNTK
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
EGRDRSHILVQYFSEFQNAFELKKFTGTSSFRAVSESVLSEAVDQLKISVQREGLHFQDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SALLSLIRELIRFRDYKNALEILNYSSSVEKNSPEFLYLRAESLFQTGEERKALLLFREA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHH
FLKDPSVAPLAVLKSGPIYFWVEKLKGSYQDESDLKEVLPVVLAERGIFEETRNYSEKEI
HHCCCCCCHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEE
LVYYNNLIRLKDTLNSRKDLYDFKIRCRILQHACLILDVCRNMQYGEIYQESKRILDSVD
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PGFFLRRQNGTQD
CCEEEECCCCCCC
>Mature Secondary Structure 
SFSRKLEEANQHLSDGDFDKAKKVFDLLLGEDPEHPETIAGYFISSYWDNRLDRIHNTK
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
EGRDRSHILVQYFSEFQNAFELKKFTGTSSFRAVSESVLSEAVDQLKISVQREGLHFQDP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SALLSLIRELIRFRDYKNALEILNYSSSVEKNSPEFLYLRAESLFQTGEERKALLLFREA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHCCHHHHHHHHHHHH
FLKDPSVAPLAVLKSGPIYFWVEKLKGSYQDESDLKEVLPVVLAERGIFEETRNYSEKEI
HHCCCCCCHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEE
LVYYNNLIRLKDTLNSRKDLYDFKIRCRILQHACLILDVCRNMQYGEIYQESKRILDSVD
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PGFFLRRQNGTQD
CCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA