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The map label for this gene is 45658329

Identifier: 45658329

GI number: 45658329

Start: 3013440

End: 3014834

Strand: Reverse

Name: 45658329

Synonym: LIC12487

Alternate gene names: NA

Gene position: 3014834-3013440 (Counterclockwise)

Preceding gene: 45658330

Following gene: 45658327

Centisome position: 70.49

GC content: 39.71

Gene sequence:

>1395_bases
TTGCCAATCCGCTTTTACAGAAAAACTTCAAAACCCATGTGTGATACTTTTGTTGCTACTCCTTCCTTTACCGGAACCAG
TTCTATGATTTTTGGAAAAAATTCAGATAGAGAACCAAACGAGGCACAGGCCCTTTTGAGAGTTCCAGCCAGATCCAAAG
AGTCTAAGACATTTTGTACTTATATTCAAGTTCCAGGAGCAAAACAAACTCAGGAAGTAATTTTATCTAAACCTTTTCAG
ATGTGGGGCGCTGAGATGGGAGCCAATGAGTCCGGTGTGGTGATCGGAAACGAAGCGGTCTTTACAAAAATTCCTTTTGA
AAAGAAAAATCAAGGATTGACCGGTATGGATTTGCTTAGACTTGCATTGGAAAGAAGCAAGGACGCGGAAACTGCAAGAG
AAACTATTCTTCAATTTTTAGAAAAATTTGGTCAAGACGCTTGTGGTGGTTATACAAATCCTTCTTTTTATTATCATAAT
AGTTTTATAATCGCTGATTTTAAAAACGCATTCGTATTGGAGACTGCAGGAAAATTTTGGGCTTGGAAAAAGATAGAAGG
TTTTTATTCCATTTCTAACGGGTTGACTCTTGAAGATAACTACGATGCAATTCATCCTAACGCGATTGACTTCGCTTATC
AAAATGGATGGATAAAAAAGGAAAAACCGTTTTCGTTTCGAGCCTCGTTTTCCGATTCCTTTTTTACTTTTTTCAGCAAG
TGTAAGATTCGAAGAAAAATCACTTCCGATTTGGGCTCGGATCAAAAAGGAAATCTAGGTCCAAGAGAAGCGATGGAAAT
TCTGAGACAGGAGGGAGAGCCGGGAATTACCAAACCGTTTTTTCCTTTCAGATCCAACATGGGTTCTGTTTGTCTTCACG
CGACCGGTCCGATTACGCCTAACGGAACTACTGGTTCTATGGTAGCTGAACTAAATCCAGACGTTTCCCAAAATCGTTTT
TGGTTTACTGGAACTTCTATTCCTTCAATTTCGTTTTTTATTCCAGCTGGTTTTTCGGGAACGAGTTTTTTGGAAAAAAA
TTTTGAACAACCGGGAGCGGCGTTTGATTCTTCTCTTTGGTGGACTCACGAGAAATTCTACCGAGAAATACAGAGATTTT
ATCCGGAGGCGAAACGTGCGGTTCAACAAAGGATCCTGGATTTAGAGAATTTGTGGTTTGAGGAATCGAATCGAATTCTA
AAAAAGAGGAAAGGGCAGAAGACTTTAGACACGTTAAGCGAAACTGCAATCCGCACGACTTTGCAGGAATATCGTTTTTG
GAATAATTCTTTGTTAAACGAACTCAAAAGTAAAAACCGGCAACGGACCTTTGCTCCTTTTTACAATTGGCAGTGGTCCG
TTTGGAATCGGAAAGCGGGTATTAATGTTTCTTAG

Upstream 100 bases:

>100_bases
TGAAAATGATGGATTTTCTAATTGGTAAGAGTTCTCACATTTTCAAAATTGAATTGCAAATTTTCTGAAACTGAACTCGC
ACGAAACAGTAAAAAACGAC

Downstream 100 bases:

>100_bases
AGTTTGCCTTTCGAATTCTCATATTGATCAGTTCTACTCCTAAAGAGAATGCCATAGAAAAATAAACGTAACCTTTAGGA
ATATGGAAGTGTAGTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Dipeptidase-Like Protein; Peptidase Family C

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MPIRFYRKTSKPMCDTFVATPSFTGTSSMIFGKNSDREPNEAQALLRVPARSKESKTFCTYIQVPGAKQTQEVILSKPFQ
MWGAEMGANESGVVIGNEAVFTKIPFEKKNQGLTGMDLLRLALERSKDAETARETILQFLEKFGQDACGGYTNPSFYYHN
SFIIADFKNAFVLETAGKFWAWKKIEGFYSISNGLTLEDNYDAIHPNAIDFAYQNGWIKKEKPFSFRASFSDSFFTFFSK
CKIRRKITSDLGSDQKGNLGPREAMEILRQEGEPGITKPFFPFRSNMGSVCLHATGPITPNGTTGSMVAELNPDVSQNRF
WFTGTSIPSISFFIPAGFSGTSFLEKNFEQPGAAFDSSLWWTHEKFYREIQRFYPEAKRAVQQRILDLENLWFEESNRIL
KKRKGQKTLDTLSETAIRTTLQEYRFWNNSLLNELKSKNRQRTFAPFYNWQWSVWNRKAGINVS

Sequences:

>Translated_464_residues
MPIRFYRKTSKPMCDTFVATPSFTGTSSMIFGKNSDREPNEAQALLRVPARSKESKTFCTYIQVPGAKQTQEVILSKPFQ
MWGAEMGANESGVVIGNEAVFTKIPFEKKNQGLTGMDLLRLALERSKDAETARETILQFLEKFGQDACGGYTNPSFYYHN
SFIIADFKNAFVLETAGKFWAWKKIEGFYSISNGLTLEDNYDAIHPNAIDFAYQNGWIKKEKPFSFRASFSDSFFTFFSK
CKIRRKITSDLGSDQKGNLGPREAMEILRQEGEPGITKPFFPFRSNMGSVCLHATGPITPNGTTGSMVAELNPDVSQNRF
WFTGTSIPSISFFIPAGFSGTSFLEKNFEQPGAAFDSSLWWTHEKFYREIQRFYPEAKRAVQQRILDLENLWFEESNRIL
KKRKGQKTLDTLSETAIRTTLQEYRFWNNSLLNELKSKNRQRTFAPFYNWQWSVWNRKAGINVS
>Mature_463_residues
PIRFYRKTSKPMCDTFVATPSFTGTSSMIFGKNSDREPNEAQALLRVPARSKESKTFCTYIQVPGAKQTQEVILSKPFQM
WGAEMGANESGVVIGNEAVFTKIPFEKKNQGLTGMDLLRLALERSKDAETARETILQFLEKFGQDACGGYTNPSFYYHNS
FIIADFKNAFVLETAGKFWAWKKIEGFYSISNGLTLEDNYDAIHPNAIDFAYQNGWIKKEKPFSFRASFSDSFFTFFSKC
KIRRKITSDLGSDQKGNLGPREAMEILRQEGEPGITKPFFPFRSNMGSVCLHATGPITPNGTTGSMVAELNPDVSQNRFW
FTGTSIPSISFFIPAGFSGTSFLEKNFEQPGAAFDSSLWWTHEKFYREIQRFYPEAKRAVQQRILDLENLWFEESNRILK
KRKGQKTLDTLSETAIRTTLQEYRFWNNSLLNELKSKNRQRTFAPFYNWQWSVWNRKAGINVS

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38504671, Length=327, Percent_Identity=39.7553516819572, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI222537730, Length=324, Percent_Identity=39.5061728395062, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI222537732, Length=324, Percent_Identity=39.5061728395062, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI302058287, Length=323, Percent_Identity=37.4613003095975, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI224465190, Length=421, Percent_Identity=31.353919239905, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI224465194, Length=412, Percent_Identity=31.5533980582524, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI224465187, Length=412, Percent_Identity=31.5533980582524, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI224465192, Length=352, Percent_Identity=30.9659090909091, Blast_Score=127, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53114; Mature: 52982

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIRFYRKTSKPMCDTFVATPSFTGTSSMIFGKNSDREPNEAQALLRVPARSKESKTFCT
CCCEECCCCCCCHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEE
YIQVPGAKQTQEVILSKPFQMWGAEMGANESGVVIGNEAVFTKIPFEKKNQGLTGMDLLR
EEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEECCCEEEEECCCHHCCCCCCHHHHHH
LALERSKDAETARETILQFLEKFGQDACGGYTNPSFYYHNSFIIADFKNAFVLETAGKFW
HHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEECEEEEEECCCEEEEECCCCCE
AWKKIEGFYSISNGLTLEDNYDAIHPNAIDFAYQNGWIKKEKPFSFRASFSDSFFTFFSK
EHHHHCCEEEECCCEEECCCCCCCCCCCEEEHCCCCCCCCCCCCEEECCCCHHHHHHHHH
CKIRRKITSDLGSDQKGNLGPREAMEILRQEGEPGITKPFFPFRSNMGSVCLHATGPITP
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCC
NGTTGSMVAELNPDVSQNRFWFTGTSIPSISFFIPAGFSGTSFLEKNFEQPGAAFDSSLW
CCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHH
WTHEKFYREIQRFYPEAKRAVQQRILDLENLWFEESNRILKKRKGQKTLDTLSETAIRTT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQEYRFWNNSLLNELKSKNRQRTFAPFYNWQWSVWNRKAGINVS
HHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
PIRFYRKTSKPMCDTFVATPSFTGTSSMIFGKNSDREPNEAQALLRVPARSKESKTFCT
CCEECCCCCCCHHHHEECCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEE
YIQVPGAKQTQEVILSKPFQMWGAEMGANESGVVIGNEAVFTKIPFEKKNQGLTGMDLLR
EEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEECCCEEEEECCCHHCCCCCCHHHHHH
LALERSKDAETARETILQFLEKFGQDACGGYTNPSFYYHNSFIIADFKNAFVLETAGKFW
HHHHCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEECEEEEEECCCEEEEECCCCCE
AWKKIEGFYSISNGLTLEDNYDAIHPNAIDFAYQNGWIKKEKPFSFRASFSDSFFTFFSK
EHHHHCCEEEECCCEEECCCCCCCCCCCEEEHCCCCCCCCCCCCEEECCCCHHHHHHHHH
CKIRRKITSDLGSDQKGNLGPREAMEILRQEGEPGITKPFFPFRSNMGSVCLHATGPITP
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCC
NGTTGSMVAELNPDVSQNRFWFTGTSIPSISFFIPAGFSGTSFLEKNFEQPGAAFDSSLW
CCCCCCEEEECCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCHH
WTHEKFYREIQRFYPEAKRAVQQRILDLENLWFEESNRILKKRKGQKTLDTLSETAIRTT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LQEYRFWNNSLLNELKSKNRQRTFAPFYNWQWSVWNRKAGINVS
HHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA