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The map label for this gene is 45658327

Identifier: 45658327

GI number: 45658327

Start: 3012095

End: 3012658

Strand: Reverse

Name: 45658327

Synonym: LIC12485

Alternate gene names: NA

Gene position: 3012658-3012095 (Counterclockwise)

Preceding gene: 45658329

Following gene: 45658325

Centisome position: 70.44

GC content: 39.01

Gene sequence:

>564_bases
ATGGAGTTTCTTCCGGAAAGTTTTAAAACGAGAGAAGCGTTTGGAATTCATTTGAGGGGAAAGAACATTCTTACTTATCT
GCCTCCTCGTCTTAGTCTTTTAGTTTTTTTAAGACATTCGGGATGTATTTTTGTTAGGGAGGCGGTTGCTGATTTGAAAG
AGATGTTTGAAAGTTCTCTTTCTTTTCCTTCGATTTTATTTTTTTTTCCTGAAAATTTAAAAAACTGCGAAAAATTTTTT
GAAGAAGTTTGGAGGGACGCTTGTGTGGTTTCCGATCCAAATACGGAATTTTATCAAGACTTGGGATTACAAAACGCAAA
TTTAATCCAACTTGCAGGTCCTGAAGTATGGATGGGAATTGCGAGGGCTACTCTCAAAGGACATTTTTATGGAATTCCCG
GAAGTAATCCTTTGCAGATGCCTGGAGTATTTCTTGTAGTTCAGGATCGTATCGTATGGGAACATAGATACAGGCATATA
GGAGATCATCCCGATTGGAAAAATCTTCCCGGAATCACTCTTTTACCCGGACCAGAATTTGGACCTGGGGTTTTACCCGC
TTAG

Upstream 100 bases:

>100_bases
CTTTATCGAGAGAAAGTAATTCCATCCTTGCAGTTAATTTTTCGAAAAGGAATAAATCAATCGATTTACAAAGAAACTTA
AGGAGGCATACTGTATAGGT

Downstream 100 bases:

>100_bases
TTAACGGACGACCGTCACTGAACAAGTAGCGTGATGAACGATTCGATCGGAAACGGAACCTACTAAAAATCTTCCTACTG
CGGAGAGTCCTCTCGAACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEFLPESFKTREAFGIHLRGKNILTYLPPRLSLLVFLRHSGCIFVREAVADLKEMFESSLSFPSILFFFPENLKNCEKFF
EEVWRDACVVSDPNTEFYQDLGLQNANLIQLAGPEVWMGIARATLKGHFYGIPGSNPLQMPGVFLVVQDRIVWEHRYRHI
GDHPDWKNLPGITLLPGPEFGPGVLPA

Sequences:

>Translated_187_residues
MEFLPESFKTREAFGIHLRGKNILTYLPPRLSLLVFLRHSGCIFVREAVADLKEMFESSLSFPSILFFFPENLKNCEKFF
EEVWRDACVVSDPNTEFYQDLGLQNANLIQLAGPEVWMGIARATLKGHFYGIPGSNPLQMPGVFLVVQDRIVWEHRYRHI
GDHPDWKNLPGITLLPGPEFGPGVLPA
>Mature_187_residues
MEFLPESFKTREAFGIHLRGKNILTYLPPRLSLLVFLRHSGCIFVREAVADLKEMFESSLSFPSILFFFPENLKNCEKFF
EEVWRDACVVSDPNTEFYQDLGLQNANLIQLAGPEVWMGIARATLKGHFYGIPGSNPLQMPGVFLVVQDRIVWEHRYRHI
GDHPDWKNLPGITLLPGPEFGPGVLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21316; Mature: 21316

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLPESFKTREAFGIHLRGKNILTYLPPRLSLLVFLRHSGCIFVREAVADLKEMFESSL
CCCCCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHC
SFPSILFFFPENLKNCEKFFEEVWRDACVVSDPNTEFYQDLGLQNANLIQLAGPEVWMGI
CCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCEEEECCCHHHHHH
ARATLKGHFYGIPGSNPLQMPGVFLVVQDRIVWEHRYRHIGDHPDWKNLPGITLLPGPEF
HHHHHCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
GPGVLPA
CCCCCCC
>Mature Secondary Structure
MEFLPESFKTREAFGIHLRGKNILTYLPPRLSLLVFLRHSGCIFVREAVADLKEMFESSL
CCCCCCCCCCCCEEEEEEECCCEEEECCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHC
SFPSILFFFPENLKNCEKFFEEVWRDACVVSDPNTEFYQDLGLQNANLIQLAGPEVWMGI
CCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHCCCCCCCEEEECCCHHHHHH
ARATLKGHFYGIPGSNPLQMPGVFLVVQDRIVWEHRYRHIGDHPDWKNLPGITLLPGPEF
HHHHHCCEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
GPGVLPA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA