Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 45658330

GI number: 45658330

Start: 3014958

End: 3015380

Strand: Reverse

Name: ybgC [C]

Synonym: LIC12488

Alternate gene names: 45658330

Gene position: 3015380-3014958 (Counterclockwise)

Preceding gene: 45658331

Following gene: 45658329

Centisome position: 70.5

GC content: 40.43

Gene sequence:

>423_bases
ATGCCAAAACCGGTCCGTTATTCTTACAGTTATCTACAGAAAGTTGCTTGGGGAGATATGGATGCGTTTGGGCATGTCAA
TCACGTGGTTTATGCAAAGTATTTTGAAAATGCAAGGGCGAATTATTTCACCGATTTAAAACTATGGGACACTTCGGATA
CGTCTTCGCAAACAGGTCCAGTCATTACACACATTCAAGTAGAGTATAGAAAACAAGTTCGTTATCCGGATACGTTGGAA
ATTACAATGCAGGTGGATTCTGTTTCTTCTCGTTCTTTTAAAATTTCATGTACGATGTGGAATCAAGAAGGGGATTGTGT
GGCGACCGCAAGCGGAGAGTTTCTTTGGCTGAACTTTGTGACTCAGAAACCAACTCAACTTCCTGAAATCTATAAAAGTT
TATTTGCTCAAAGTCGCGTCTGA

Upstream 100 bases:

>100_bases
CTCGTCAAAACTTGCTACTGAAAAAAACTGTAAAACTAATGAAGTAAGTTTATATCCAAAAAATTGAAATCAATAAATTT
TAAAAATGGGATTTTAGCCA

Downstream 100 bases:

>100_bases
ATTTTACTTTTTCAACGATGATTTGAAAATGATGGATTTTCTAATTGGTAAGAGTTCTCACATTTTCAAAATTGAATTGC
AAATTTTCTGAAACTGAACT

Product: hypothetical protein

Products: 4-hydroxybenzoate; CoA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Protein; Thiesterase

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPKPVRYSYSYLQKVAWGDMDAFGHVNHVVYAKYFENARANYFTDLKLWDTSDTSSQTGPVITHIQVEYRKQVRYPDTLE
ITMQVDSVSSRSFKISCTMWNQEGDCVATASGEFLWLNFVTQKPTQLPEIYKSLFAQSRV

Sequences:

>Translated_140_residues
MPKPVRYSYSYLQKVAWGDMDAFGHVNHVVYAKYFENARANYFTDLKLWDTSDTSSQTGPVITHIQVEYRKQVRYPDTLE
ITMQVDSVSSRSFKISCTMWNQEGDCVATASGEFLWLNFVTQKPTQLPEIYKSLFAQSRV
>Mature_139_residues
PKPVRYSYSYLQKVAWGDMDAFGHVNHVVYAKYFENARANYFTDLKLWDTSDTSSQTGPVITHIQVEYRKQVRYPDTLEI
TMQVDSVSSRSFKISCTMWNQEGDCVATASGEFLWLNFVTQKPTQLPEIYKSLFAQSRV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.2.23

Molecular weight: Translated: 16226; Mature: 16095

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPVRYSYSYLQKVAWGDMDAFGHVNHVVYAKYFENARANYFTDLKLWDTSDTSSQTGP
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCEEEEEEEEECCCCCCCCCC
VITHIQVEYRKQVRYPDTLEITMQVDSVSSRSFKISCTMWNQEGDCVATASGEFLWLNFV
EEEEEEEEEHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEE
TQKPTQLPEIYKSLFAQSRV
CCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKPVRYSYSYLQKVAWGDMDAFGHVNHVVYAKYFENARANYFTDLKLWDTSDTSSQTGP
CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCEEEEEEEEECCCCCCCCCC
VITHIQVEYRKQVRYPDTLEITMQVDSVSSRSFKISCTMWNQEGDCVATASGEFLWLNFV
EEEEEEEEEHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCEEEEEEE
TQKPTQLPEIYKSLFAQSRV
CCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxybenzoyl-CoA; H2O

Specific reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA